Hello,

I recently ran a batch file which seemed to run fine for nearly all the participants.  Yet, when I did an asegstats2table command on all the subjects, I received the following error for three of them:

WARNING: cannot find /nfs/01/osu5323/freesurfer/freesurfer/subjects/JUL11_2009E/stats/aseg.stats. proceeding to next file
WARNING: cannot find /nfs/01/osu5323/freesurfer/freesurfer/subjects/JUL12_2009C/stats/aseg.stats. proceeding to next file
WARNING: cannot find /nfs/01/osu5323/freesurfer/freesurfer/subjects/JUL12_2009G/stats/aseg.stats. proceeding to next file

I checked the status of /scripts/recon-all-status.log, and it said that recon-all finished without errors.  Would I want to only rerun step 11 of the recon-all workflow, which is Aseg volumetric labeling and statistics?

Thank you,

-Andrew