Hi Actually, its the opposite. I'm trying to get a volume from the label aka http://brainybehavior.com/neuroimaging/2010/05/converting-cortical-labels-from-freesurfer-to-volumetric-masks/

On 06/16/11, Douglas N Greve <greve@nmr.mgh.harvard.edu> wrote:
If you're trying to create a label from a volume then use mri_cor2label.
doug

Sudhin A. Shah wrote:
>Hi,
>
>I am trying to use this for the aparc+aseg-in-highres.mgz file instead of the default aparc
>
>mri_annotation2label --subject AY --hemi lh --outdir $fsfolder/AY/labels  this works
>
>But how do I specify aparc+aseg-in-highres.mgz
>
>I tried --aparc+aseg-in-highres but it was not recognised..
>
>Thank you,
>S
>
>
>
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Sudhin A. Shah
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