I'm not sure to understand what you mean with pial layers. Recon-all -lgi computes the local gyrification index. Can you please send the full command and full log of the error that you get?

Marie

On 4 juin 2014, at 19:47, "Borzello, Mia" <MBORZELLO@partners.org> wrote:

Hi Freesurfers,

I ran mris_compute_lgi to make the pial layers but they've error- I've included a screenshot. It says it can't find that directory, but I'm pretty sure that directly exists.

Thanks so much for your help,

Mia

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