I’m trying to unpack and run recon-all on a set of MEMPRAGE images we’ve obtained in Lunder 6 scanner (Siemens Skyra), but recon-all is giving me errors. I’ve attached for the scan.info file (outputted by unpacksdcmdir), the unpack.config file that I used to unpack the MEMPRAGE images, and the recon-all.log file containing the error that recon-all command gives me. I’m running recon-all on in MEMPRAGE3 folder containing MEMPRAGE_IPAT3 RMS images. Please let me know if I have to provide any further info about this problem.

Thank you very much for your help,
Emad

Emad Ahmadi, MD
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Postdoc Research Fellow
Department of Radiology
Massachusetts General Hospital
Harvard Medical School

25 New Chardon Street, Suite 400
Boston, MA 02114
Tel: 617 726 5237
Email: emad@nmr.mgh.harvard.edu