On Wed, 2008-04-30 at 12:31 +0200, j janssen wrote:
> Hi,
>
> i can not see the pial surface using tksurfer. i´m using Fedora core
> 7, 64 bits, with version: freesurfer-Linux-centos4_x86_64-stable-pub-
> v4.0.3-full.tar.gz, with nvidia card.
>
> when i enter:
> ldd /usr/local/freesurfer/bin/tksurfer.bin
> i get:
> linux-vdso.so.1 => (0x00007fff463fd000)
>
libtix8.1.8.4.so => not found
>
libtk8.4.so => /usr/lib64/
libtk8.4.so (0x0000003678a00000)
>
libtcl8.4.so => /usr/lib64/
libtcl8.4.so (0x0000003678600000)
> libGLU.so.1 => /usr/lib64/libGLU.so.1 (0x00002aaaaaaca000)
> libXmu.so.6 => /usr/lib64/libXmu.so.6 (0x0000003c35600000)
> libGL.so.1 => /usr/lib64/libGL.so.1 (0x0000003c2d200000)
> libXext.so.6 => /usr/lib64/libXext.so.6 (0x0000003c28400000)
> libX11.so.6 => /usr/lib64/libX11.so.6 (0x0000003c27c00000)
> libexpat.so.0 => /lib64/libexpat.so.0 (0x0000003c28800000)
> libjpeg.so.62 => /usr/lib64/libjpeg.so.62 (0x0000003c2f200000)
> libtiff.so.3 => /usr/lib64/libtiff.so.3 (0x000000367e800000)
> libz.so.1 => /lib64/libz.so.1 (0x0000003c26400000)
> libcrypt.so.1 => /lib64/libcrypt.so.1 (0x0000003c38200000)
> libdl.so.2 => /lib64/libdl.so.2 (0x0000003c26000000)
> libpthread.so.0 => /lib64/libpthread.so.0 (0x0000003c26c00000)
> libstdc++.so.6 => /usr/lib64/libstdc++.so.6
> (0x0000003ed0a00000)
> libm.so.6 => /lib64/libm.so.6 (0x0000003ed0e00000)
> libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x0000003c33200000)
> libc.so.6 => /lib64/libc.so.6 (0x0000003c25800000)
> libXt.so.6 => /usr/lib64/libXt.so.6 (0x0000003c38e00000)
> libXxf86vm.so.1 => /usr/lib64/libXxf86vm.so.1
> (0x0000003c3ae00000)
> libdrm.so.2 => /usr/lib64/libdrm.so.2 (0x0000003c2d600000)
> libXau.so.6 => /usr/lib64/libXau.so.6 (0x0000003c27400000)
> libXdmcp.so.6 => /usr/lib64/libXdmcp.so.6 (0x0000003c27000000)
> /lib64/ld-linux-x86-64.so.2 (0x0000003c25400000)
> libSM.so.6 => /usr/lib64/libSM.so.6 (0x0000003c2fa00000)
> libICE.so.6 => /usr/lib64/libICE.so.6 (0x0000003c30200000)
>
> starting tksurfer:
> [neuro@fedoraneuro subjects]$ tksurfer bert rh pial
> gives:
> surfer: current subjects dir: /usr/local/freesurfer/subjects
> surfer: not in "scripts" dir ==> using cwd for session root
> surfer: session root data dir ($session) set to:
> surfer: /usr/local/freesurfer/subjects
> surfer: Reading header info
> from /usr/local/freesurfer/subjects/bert/mri/T1.mgz
> surfer: vertices=131277, faces=262550
> Loading /usr/local/freesurfer/surface_labels.txt
> surfer: ### redraw failed: no gl window open
> surfer: single buffered window
> surfer: using interface /usr/local/freesurfer/lib/tcl/tksurfer.tcl
> Reading /usr/local/freesurfer/lib/tcl/tkm_common.tcl
> Reading /usr/local/freesurfer/lib/tcl/tkm_wrappers.tcl
> Reading /usr/local/freesurfer/lib/tcl/fsgdfPlot.tcl
> Reading /usr/local/freesurfer/lib/tcl/tkUtils.tcl
> Successfully parsed tksurfer.tcl
> reading white matter vertex locations...
>
> can you help?
>
> thanks!
> -joost
>
>
>
>
>
>
> On Fri, Apr 25, 2008 at 4:05 PM, Nick Schmansky
> <
nicks@nmr.mgh.harvard.edu> wrote:
> If you have an Nvidia graphics card, you will need to update
> the driver.
>
> Try running nvidia-installer --update, as root (preferably
> have your
> sysadmin do this).
>
> Nick
>
>
> On Fri, 2008-04-25 at 21:25 +0800, yczhang wrote:
> > Hi,
> > when I launched the command tksurfer to see the constructed
> pial
> > surface,
> > only a very small part of the surface can been seen in the
> window.
> > I do not know how to fix the problem.
> > Thanks!
> >
> >
> >
> ______________________________________________________________________
> > yczhang
> > 2008-04-25
>
> > _______________________________________________
> > Freesurfer mailing list
> >
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> >
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>
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