hello

i'm running the LGI for all my subjects, and i have no problem with almost all, but, i recibe an error message with one subject, and just with the right hemisphere no problem when making Left hemisphere, does anybody knows what can i do for correcting that error and to calculate the LGI?.

 
the error message is:
...

lGI for vertex number 33301 of the outer mesh is 2.2086

lGI for vertex number 33401 of the outer mesh is 2.8605

... remeasuring lGI value for vertex iV = 33501. It may take a few minutes.

WARNING -- Problem for vertex iV = 33501, lGI value is aberrantly high (lGI=43.811)...

...lGI computation will be stopped. This may be caused by topological defects, check mris_euler_number on the pial surface.

 

ERROR: compute_lgi did not create output file 'tmp-mris_compute_lgi-rh.pial/rh.pial_lgi.asc'!

Linux localhost.localdomain 2.6.9-34.ELsmp #1 SMP Thu Mar 9 06:23:23 GMT 2006 x86_64 x86_64 x86_64 GNU/Linux

 

recon-all exited with ERRORS at Fri Apr  3 19:47:35 CEST 2009


Regards
Gabriel

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