Hi,

what is the best way to represent and show the TRACULA outputs?

I would use 3D rendering, reporting the ouput on structural image.

I'm trying several option but the resolution and results are poorly satisfactory. Particularly, if I use free view and I upload the aparc+aseg+2mm.flt.nii or cortex as reference, I must modify the opacity to visualize the tract, but the quality is low. 

Is there a way to cut a window within the cortical redering to visualize the deep tract?

Please, may you give me some suggestion?

Thank you very much.

Regards,

Stefano