Hi Justina,

It looks like the matlab installer is trying to use unzip​ but it can't find it.

Can you try running:
`sudo apt-get install unzip`

To install unzip then try the matlab installer again?

-Paul
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of You Na Lee <justinalee56@gmail.com>
Sent: Tuesday, September 13, 2022 9:01 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Freesurfer: fs_install_mcr: Unzip command not found
 

        External Email - Use Caution        

To whom it may concern,

 

Apologies for my first post, I was a little bit confounded as to how I can reach for help.

I would like to use the segmentation of hippocampal subfields and the nuclei of the amygdala.
Currently, I am working with Ubuntu on windows with Freesurfer 7.3.2.


I am trying to install MATLAB Runtime 2019b to run the command segmentHA_T1.sh for the segmentation as described above. The following command shows the corresponding error:

 

ylee6@LAPTOP-63HA9ANS: /usr/local/freesurfer/7.3.2/bin$ fs_install_mcr R2019b

  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

                                 Dload  Upload   Total   Spent    Left  Speed

100 2657M  100 2657M    0     0  10.0M      0  0:04:25  0:04:25 --:--:-- 10.1M

/usr/local/freesurfer/7.3.2/bin/fs_install_mcr: line 62: unzip: command not found

 

I am currently struggling to find the solution to this issue. Is the installation not in the correct path? Is MATLAB Runtime installed at all? Should an already existing matlab file be deleted?
Any help would be much appreciated.

 

Sincerely,

Justina

 

 

 

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