Hi,<br><br>We had never really finalized the QA Tools to feel comfortable distributing them, and so the permissions on these files are still set so that only the group of us working with them can use it.&nbsp; In fact, I had thought that the wiki page associated with it was likewise only available to those same people (to avoid this exact confusion).&nbsp; Our goal had been to incorporate these scripts into the FS distribution, but that hasn&#39;t happened yet.&nbsp; I&#39;m no longer at the center, but I&#39;m sure someone else can give you access to these - if you copy it to your own directory (
i.e., don&#39;t use our only copy of the scripts).<br><br>Thanks,<br>Jenni<br><br><div><span class="gmail_quote">On 10/9/07, <b class="gmail_sendername">Pratap Kunwar</b> &lt;<a href="mailto:pkunwar@nmr.mgh.harvard.edu">pkunwar@nmr.mgh.harvard.edu
</a>&gt; wrote:</span><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">hi all<br><br>I tried to use QA tools on the wiki (writen by jpacheco) at
<br><a href="https://surfer.nmr.mgh.harvard.edu/fswiki/QATools?action=highlight&amp;value=qa+tools">https://surfer.nmr.mgh.harvard.edu/fswiki/QATools?action=highlight&amp;value=qa+tools</a>.<br><br>I got the following error saying permission denied. I could not even copy
<br>the QATOOLS to my folder.<br><br>thanks<br>pratap<br><br>[galen:S4_HR_LR18_recon] (nmr-std-env) setenv QA_SCRIPTS<br>/space/tensor/17/users/jpacheco/QAtools [galen:S4_HR_LR18_recon]<br>(nmr-std-env) $QA_SCRIPTS/data_checker/recon_checker -nocheckasegoutliers
<br>-s rfa1410 -o QAsnap.html<br>/space/tensor/17/users/jpacheco/QAtools/data_checker/recon_checker:<br>Permission denied.<br><br>--------------------------------------------------------------<br>FREESURFER_HOME: /usr/local/freesurfer/stable4
<br>Build stamp: freesurfer-Linux-centos4_x86_64-stable-v4.0.1-20071006<br>RedHat release: CentOS release 4.4 (Final)<br>Kernel info: Linux 2.6.9-42.0.3.ELsmp x86_64<br>NMR Center info (/space/freesurfer exists):<br>&nbsp;&nbsp;machine: galen
<br>&nbsp;&nbsp;SUBJECTS_DIR:<br>/autofs/space/galen_002/users/carl/S4_HR_LR18/S4_HR_LR18_recon/<br>&nbsp;&nbsp;PWD: /space/galen/2/users/carl/S4_HR_LR18/S4_HR_LR18_recon<br><br><br>_______________________________________________<br>Freesurfer mailing list
<br><a href="mailto:Freesurfer@nmr.mgh.harvard.edu">Freesurfer@nmr.mgh.harvard.edu</a><br><a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer">https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
</a><br></blockquote></div><br><br clear="all"><br>-- <br>Jenni Pacheco, MA<br>Learning and Memory Lab<br>The University of Texas at Austin<br>Department of Psychology<br>1 University Station A8000<br>Austin, TX 78712<br>
phone: (512) 471-2727<br>fax: (512) 471-5935 <br>email: <a href="mailto:jpacheco@mail.utexas.edu">jpacheco@mail.utexas.edu</a>