> Date: Thu, 16 Oct 2014 12:00:04 -0400
> From: greve@nmr.mgh.harvard.edu
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] volume to surface registration problem
>
>
> The problem is probabably that the fsl flirt registration failed and
> that caused bbr to fail. If you have spm and matlab installed, running
> it with
>
> cd /misc/data41/yuex/humanfMRI/human_curvature/subjdata/field090514
> bbregister --s field --init-spm --6 --bold --mov bold/template.nii --reg bold/register.dof6.dat --init-reg-out bold/init.register.dof6.dat
>
>
>
>
> On 10/16/2014 11:14 AM, Xiaomin Yue wrote:
> > Hi,
> >
> > When I used preproc-sess processing my data, the registration output
> > is off a great of deal. The functional data was collected using 7T,
> > and the surface was reconstructed successfully from 3T data and was
> > checked visually multiple times. I am using fs5.3 installed on a
> > linux system. Attached is the registration log file.
> >
> > Any suggestions will be appreciated.
> >
> > Xiaomin Yue
> >
> >
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>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> greve@nmr.mgh.harvard.edu
> Phone Number: 617-724-2358
> Fax: 617-726-7422
>
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