./configure --disable-Werror --enable-fermi-gpu --with-cuda="/usr/local/cuda" --with-pkgs-dir=/home/scanlab/Desktop/Derek/centos6-x86_64-packages --prefix=/home/scanlab/Desktop/Derek/fs_install configure: Setting System... checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu using '/home/scanlab/Desktop/Derek/centos6-x86_64-packages' checking AMD Open64 compiler directories... Open64 directory is not supplied checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '1000' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... gcc3 checking for gawk... (cached) gawk checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... file_magic ELF [0-9][0-9]*-bit [LM]SB (shared object|dynamic lib ) checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... g++ -E checking for g77... no checking for xlf... no checking for f77... f77 checking whether we are using the GNU Fortran 77 compiler... yes checking whether f77 accepts -g... yes checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from gcc object... ok checking for objdir... .libs checking for ar... ar checking for ranlib... ranlib checking for strip... strip checking for file... /usr/bin/file checking if gcc static flag works... yes checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC checking if gcc PIC flag -fPIC works... yes checking if gcc supports -c -o file.o... yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking dynamic linker characteristics... GNU/Linux ld.so checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... no checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking dynamic linker characteristics... GNU/Linux ld.so appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for f77 option to produce PIC... -fPIC checking if f77 PIC flag -fPIC works... yes checking if f77 supports -c -o file.o... yes checking whether the f77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking dynamic linker characteristics... GNU/Linux ld.so checking whether we are using the GNU Fortran 77 compiler... (cached) yes checking whether f77 accepts -g... (cached) yes configure: Have gcc 4.x where x >= 4 configure: Copying /usr/bin/libtool overtop the PROG_LIBTOOL checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for memory.h... (cached) yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/timeb.h usability... yes checking sys/timeb.h presence... yes checking for sys/timeb.h... yes checking for unistd.h... (cached) yes checking values.h usability... yes checking values.h presence... yes checking for values.h... yes checking wctype.h usability... yes checking wctype.h presence... yes checking for wctype.h... yes checking for sys/types.h... (cached) yes checking for stdint.h... (cached) yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for mode_t... yes checking for off_t... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for ptrdiff_t... yes checking whether closedir returns void... no checking for error_at_line... yes checking whether lstat correctly handles trailing slash... yes checking whether lstat accepts an empty string... no checking whether lstat correctly handles trailing slash... (cached) yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getpagesize... yes checking for working mmap... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking return type of signal handlers... void checking whether stat accepts an empty string... no checking for working strtod... yes checking for vprintf... yes checking for _doprnt... no checking for working volatile... yes checking for pid_t... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... yes checking for working vfork... (cached) yes checking for working memcmp... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for pid_t... (cached) yes checking for bzero... yes checking for calloc... yes checking for dup2... yes checking for floor... no checking for ftime... yes checking for getdelim... yes checking for getenv... yes checking for getcwd... yes checking for getpagesize... (cached) yes checking for gettimeofday... yes checking for isascii... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for munmap... yes checking for pow... no checking for putenv... yes checking for rint... no checking for select... yes checking for setenv... yes checking for sqrt... no checking for strcasecmp... yes checking for strchr... yes checking for strcspn... yes checking for strdup... yes checking for strerror... yes checking for strncasecmp... yes checking for strrchr... yes checking for strspn... yes checking for strstr... yes checking for strtol... yes checking for uname... yes checking for /bin/tcsh... yes checking for zcat... 1 checking for gzip... 1 checking for latex... latex checking for xxd... xxd checking for xmllint... no checking whether byte ordering is bigendian... no byte order is 1234 configure: Setting OS from target... configure: OS is Linux checking for _gfortran_compare_string in -lgfortran... yes configure: Using OpenMP with gcc 4.x checking for /cl.h... no checking for cuInit in -lcuda -L/usr/local/cuda/lib... yes checking for nvcc... /usr/local/cuda/bin/nvcc configure: Building for Fermi-class GPU configure: Setting CPU optimization... configure: CPUTYPE is intel_haswell checking CPU optimization...... -m64 checking whether gcc accepts -m64... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for cc_r... gcc checking for X... libraries , headers configure: x_includes set to If not correct specify using --x-includes= configure: x_libraries set to /usr/lib/x86_64-linux-gnu If not correct specify using --x-libraries= checking for XOpenDisplay in -lX11 -L/usr/lib/x86_64-linux-gnu... yes checking for XmuClientWindow in -lXmu -L/usr/lib/x86_64-linux-gnu... yes configure: Checking for directory specification of 3rd-party libraries... checking MNI directory... MNI directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current checking NIfTI directory... NIfTI directory is not supplied checking VXL directory... VXL directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current checking FLTK directory... FLTK directory is not supplied checking PETSc directory... PETSc directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/petsc/current checking MPI directory... MPI directory is not supplied checking BOOST directory... BOOST directory is not supplied checking ANN Approximate Nearest Neighbors directory... ANN directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/ann/current checking Tcl/Tk config... Tcl directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/tcltktixblt/current Enabled building of Tcl/Tk apps. checking for tixwish... no checking for tixwish8.1.8.3... no checking for tixwish8.1.8.4... no INFO: tixwish not found. Use --with-tixwish=... to specify checking BLT directory... BLT directory is not supplied checking XawPlus directory... XawPlus directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/xawplus/current Enabled building of XawPlus apps. checking Tiff directory... Tiff directory is not supplied checking Jpeg directory... Jpeg directory is not supplied checking Expat directory... Expat directory is not supplied checking for qmake... /home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/current/bin/qmake checking for moc... /home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/current/bin/moc checking for uic... /home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/current/bin/uic checking for rcc... /home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/current/bin/rcc checking whether host operating system is Darwin... no checking whether we can build a simple Qt app... ok, looks like Qt 4 checking for the DEFINES to use with Qt... -DQT_NO_DEBUG -DQT_SCRIPT_LIB -DQT_SCRIPTTOOLS_LIB -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_CORE_LIB -DQT_SHARED checking for the CFLAGS to use with Qt... -m64 -pipe -O2 -Wall -W -D_REENTRANT $(QT_DEFINES) checking for the CXXFLAGS to use with Qt... -m64 -pipe -O2 -Wall -W -D_REENTRANT $(QT_DEFINES) checking for the INCPATH to use with Qt... -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/mkspecs/linux-g++-64 -I. -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include/QtCore -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include/QtGui -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include/QtOpenGL -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include/QtScriptTools -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include/QtScript -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/include -I. -I/usr/X11R6/include -I. checking for the LDFLAGS to use with Qt... -m64 -Wl,-O1 -Wl,-rpath,/usr/pubsw/packages/qt/4.7.1/lib checking for the LIBS to use with Qt... -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/lib -L/usr/X11R6/lib64 -L/usr/pubsw/packages/qt/4.7.1//lib -lQtScriptTools -lQtScript -L/usr/X11R6/lib64 -lQtOpenGL -lQtGui -lQtCore -lGLU -lGL -lpthread checking CppUnit directory... CppUnit directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/cppunit/current checking VTK config... VTK directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/vtk/current checking Cocoa VTK config... checking KWWidgets config... KWWidgets directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/KWWidgets/current Enabled building of KWWidgets apps. checking wxWidgets config... Enabled building of wxWidgets apps. checking GTS config... Not building GTS apps. checking ITK directory... ITK directory is /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current Enabled building of ITK apps. checking GDCM directory... Not building GDCM apps. configure: Getting OpenGL info... checking GL directory... OpenGL directory is not supplied checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for OpenGL library... -lGL GL found: Setting GL_CFLAGS=' ' and GL_LIBS='-lGL -L/usr/lib/x86_64-linux-gnu -lX11 -lm' checking for OpenGL Utility library... -lGLU GLu found: Setting GLU_CFLAGS=' ' and GLU_LIBS='-lGLU -lGL -L/usr/lib/x86_64-linux-gnu -lX11 -lm' Performing an off-site installation. configure: Making sure that all libraries can be compiled... checking for floor in -lm... yes checking for gzopen in -lz... yes checking for crypt in -lcrypt... yes checking for nccreate in -lnetcdf... yes checking for miopen in -lminc... yes checking for transform_point in -lvolume_io... yes checking for /home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/lib/libvnl.so... no checking for main in -lvnl... yes checking for main in -lvnl_algo... yes checking for PetscInitialize in -lpetsc -lmpich -lpthread ... yes checking for znzread in -lznz... no checking for FTC_Manager_LookupSize in -lvtkfreetype... no checking for vtk_freetype_FTC_Manager_LookupSize in -lvtkfreetype... no checking for FTC_Manager_LookupSize in -lfreetype... yes checking for gzopen in -lvtkzlib... yes checking for main in -lvtkpng -lvtkzlib... yes checking for /home/scanlab/Desktop/Derek/centos6-x86_64-packages/vtk/current/lib/vtk-5.6/libvtkCommon.so... yes checking for main in -lvtkCommon -lstdc++... yes checking for main in -lverdict... no checking for main in -lvtkverdict... yes checking for main in -lvtksqlite... yes checking for main in -lvtkMPEG2Encode... no checking for main in -lvtkmetaio... yes checking for main in -lvtkpng... yes checking for main in -lvtkzlib... yes checking for main in -lvtkhdf5... no checking for main in -lvtkNetCDF_cxx... no checking for main in -lLSDyna... no checking for Tcl_Init in -ltcl8.4... yes checking for Tk_Init in -ltk8.4... yes checking for Tix_Init in -lTix8.4.2... no checking for Tix_Init in -ltix8.1.8.4... yes checking for Blt_Init in -lBLT25 /home/scanlab/Desktop/Derek/centos6-x86_64-packages/tiffjpegglut/current/lib/libjpeg.a... no checking for Blt_Init in -lBLT /home/scanlab/Desktop/Derek/centos6-x86_64-packages/tiffjpegglut/current/lib/libjpeg.a... yes checking for main in -lKWWidgets... yes checking for XawInitializeWidgetSet in -lX11 -lXt -lXpm -lXawPlus... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating GEMS/Makefile config.status: creating GEMS/data/Makefile config.status: creating GEMS/scripts/Makefile config.status: creating BrainstemSS/Makefile config.status: creating BrainstemSS/linux_x86_64/Makefile config.status: creating BrainstemSS/mac_osx/Makefile config.status: creating check_siemens_dir/Makefile config.status: creating cudatest/Makefile config.status: creating cudatest/gcatest/Makefile config.status: creating cudatest/volumecopy/Makefile config.status: creating cudatest/mrilabeltest/Makefile config.status: creating dicom/Makefile config.status: creating distribution/Makefile config.status: creating distribution/average/Makefile config.status: creating distribution/average/surf/Makefile config.status: creating distribution/average/Yeo_JNeurophysiol11_MNI152/Makefile config.status: creating distribution/average/Buckner_JNeurophysiol11_MNI152/Makefile config.status: creating distribution/average/Choi_JNeurophysiol12_MNI152/Makefile config.status: creating distribution/docs/Makefile config.status: creating distribution/diffusion/Makefile config.status: creating distribution/diffusion/mgh-dti-seqpack/Makefile config.status: creating distribution/trctrain/Makefile config.status: creating distribution/fsafd/Makefile config.status: creating distribution/lib/Makefile config.status: creating distribution/lib/bem/Makefile config.status: creating distribution/sessions/Makefile config.status: creating distribution/subjects/Makefile config.status: creating distribution/fsl-extra/Makefile config.status: creating dmri_poistats/Makefile config.status: creating dmri_tensoreig/Makefile config.status: creating dngtester/Makefile config.status: creating dummy/Makefile config.status: creating dummy_qt/Makefile config.status: creating expat/Makefile config.status: creating fem_elastic/Makefile config.status: creating fsfast/Makefile config.status: creating fsfast/bin/Makefile config.status: creating fsfast/docs/Makefile config.status: creating fsfast/toolbox/Makefile config.status: creating fsgdf/Makefile config.status: creating fslutils/Makefile config.status: creating glut/Makefile config.status: creating gpu_utils/Makefile config.status: creating opencl_algorithms/Makefile config.status: creating hiam_make_surfaces/Makefile config.status: creating hiam_register/Makefile config.status: creating hiam_make_template/Makefile config.status: creating HippoSF/Makefile config.status: creating HippoSF/linux_x86_64/Makefile config.status: creating HippoSF/mac_osx/Makefile config.status: creating hipsstubs/Makefile config.status: creating histo_segment/Makefile config.status: creating histo_synthesize/Makefile config.status: creating histo_register/Makefile config.status: creating histo_register/SimpleBaseLib/Makefile config.status: creating histo_register/ParticleVideoLib/Makefile config.status: creating histo_compute_joint_density/Makefile config.status: creating histo_register_block/Makefile config.status: creating images/Makefile config.status: creating include/Makefile config.status: creating include/NrrdIO/Makefile config.status: creating include/dicom/Makefile config.status: creating include/xview/Makefile config.status: creating include/pixrect/Makefile config.status: creating include/sys/Makefile config.status: creating include/topology/Makefile config.status: creating include/fs_vnl/Makefile config.status: creating itkio/Makefile config.status: creating itkutils/Makefile config.status: creating jpeg/Makefile config.status: creating label_area/Makefile config.status: creating label_border/Makefile config.status: creating label2patch/Makefile config.status: creating label2flat/Makefile config.status: creating log/Makefile config.status: creating lta_convert/Makefile config.status: creating matlab/Makefile config.status: creating mkxsubjreg/Makefile config.status: creating mri_bias/Makefile config.status: creating mri_train_autoencoder/Makefile config.status: creating mri_log_likelihood/Makefile config.status: creating mri_add_xform_to_header/Makefile config.status: creating mri_annotation2label/Makefile config.status: creating mri_aparc2aseg/Makefile config.status: creating mri_aparc2wmseg/Makefile config.status: creating mri_apply_inu_correction/Makefile config.status: creating mri_aseg_edit_train/Makefile config.status: creating mri_aseg_edit_reclassify/Makefile config.status: creating mri_auto_fill/Makefile config.status: creating mri_average/Makefile config.status: creating mri_dct_align/Makefile config.status: creating mri_bc_sc_bias_correct/Makefile config.status: creating mri_binarize/Makefile config.status: creating mri_build_priors/Makefile config.status: creating mri_cal_renormalize_gca/Makefile config.status: creating mri_ca_label/Makefile config.status: creating mri_ca_normalize/Makefile config.status: creating mri_ca_register/Makefile config.status: creating mri_ca_tissue_parms/Makefile config.status: creating mri_ca_train/Makefile config.status: creating mri_correct_segmentations/Makefile config.status: creating mri_divide_segmentation/Makefile config.status: creating mri_gtmpvc/Makefile config.status: creating mri_rf_label/Makefile config.status: creating mri_rf_train/Makefile config.status: creating mri_gcab_train/Makefile config.status: creating mri_gtmseg/Makefile config.status: creating mri_cc/Makefile config.status: creating mri_cht2p/Makefile config.status: creating mri_cnr/Makefile config.status: creating mri_compile_edits/Makefile config.status: creating mri_coreg/Makefile config.status: creating mri_update_gca/Makefile config.status: creating mri_compute_overlap/Makefile config.status: creating mri_compute_seg_overlap/Makefile config.status: creating mri_concat/Makefile config.status: creating mri_concatenate_gcam/Makefile config.status: creating mri_concatenate_lta/Makefile config.status: creating mri_convert/Makefile config.status: creating mri_mosaic/Makefile config.status: creating mri_convert_mdh/Makefile config.status: creating mri_copy_values/Makefile config.status: creating mri_cor2label/Makefile config.status: creating mri_cvs_register/Makefile config.status: creating mri_deface/Makefile config.status: creating mri_diff/Makefile config.status: creating mri_distance_transform/Makefile config.status: creating mri_edit_segmentation/Makefile config.status: creating mri_edit_segmentation_with_surfaces/Makefile config.status: creating mri_edit_wm_with_aseg/Makefile config.status: creating mri_em_register/Makefile config.status: creating mri_estimate_tissue_parms/Makefile config.status: creating mri_evaluate_morph/Makefile config.status: creating mri_extract/Makefile config.status: creating mri_extract_conditions/Makefile config.status: creating mri_extract_label/Makefile config.status: creating mri_extract_largest_CC/Makefile config.status: creating mri_fcili/Makefile config.status: creating mri_fdr/Makefile config.status: creating mri_fieldsign/Makefile config.status: creating mri_fill/Makefile config.status: creating mri_fit_bias/Makefile config.status: creating mri_fslmat_to_lta/Makefile config.status: creating mri_fwhm/Makefile config.status: creating mri_gca_ambiguous/Makefile config.status: creating mri_gcut/Makefile config.status: creating mri_gdfglm/Makefile config.status: creating mri_glmfit/Makefile config.status: creating mri_head/Makefile config.status: creating mri_hires_register/Makefile config.status: creating mri_otl/Makefile config.status: creating mri_histo_eq/Makefile config.status: creating mri_histo_normalize/Makefile config.status: creating histo_fix_topology/Makefile config.status: creating mri_ibmc/Makefile config.status: creating mri_iic/Makefile config.status: creating mri_info/Makefile config.status: creating mri_and/Makefile config.status: creating mri_hausdorff_dist/Makefile config.status: creating mri_fuse_segmentations/Makefile config.status: creating mri_fuse_intensity_images/Makefile config.status: creating mri_sbbr/Makefile config.status: creating mri_simulate_atrophy/Makefile config.status: creating mri_joint_density/Makefile config.status: creating mri_label2label/Makefile config.status: creating mri_label2vol/Makefile config.status: creating mri_label_histo/Makefile config.status: creating mri_label_vals/Makefile config.status: creating mri_label_volume/Makefile config.status: creating mri_linear_register/Makefile config.status: creating mri_compute_structure_transforms/Makefile config.status: creating mri_make_bem_surfaces/Makefile config.status: creating mri_make_density_map/Makefile config.status: creating mri_make_labels/Makefile config.status: creating mri_make_register/Makefile config.status: creating mri_make_template/Makefile config.status: creating mri_map_cpdat/Makefile config.status: creating mri_mark_temporal_lobe/Makefile config.status: creating mri_mask/Makefile config.status: creating mri_matrix_multiply/Makefile config.status: creating mri_mc/Makefile config.status: creating mri_mcsim/Makefile config.status: creating mri_modify/Makefile config.status: creating mri_morphology/Makefile config.status: creating mri_jacobian/Makefile config.status: creating mri_compute_volume_fractions/Makefile config.status: creating mri_interpolate/Makefile config.status: creating mri_ms_EM/Makefile config.status: creating mri_ms_EM_with_atlas/Makefile config.status: creating mri_ms_LDA/Makefile config.status: creating mri_ms_fitparms/Makefile config.status: creating mri_elastic_energy/Makefile config.status: creating mri_nlfilter/Makefile config.status: creating mri_normalize/Makefile config.status: creating mri_normalize_tp2/Makefile config.status: creating mri_paint/Makefile config.status: creating mri_parse_sdcmdir/Makefile config.status: creating mri_parselabel/Makefile config.status: creating mri_partial_ribbon/Makefile config.status: creating mri_path2label/Makefile config.status: creating mri_polv/Makefile config.status: creating mri_probe_ima/Makefile config.status: creating mri_probedicom/Makefile config.status: creating mri_reduce/Makefile config.status: creating mri_register/Makefile config.status: creating mri_relabel_hypointensities/Makefile config.status: creating mri_relabel_nonwm_hypos/Makefile config.status: creating mri_remove_neck/Makefile config.status: creating mri_ribbon/Makefile config.status: creating mri_rigid_register/Makefile config.status: creating mri_robust_register/Makefile config.status: creating mri_seg_diff/Makefile config.status: creating mri_seghead/Makefile config.status: creating mri_segment/Makefile config.status: creating mri_segment_tumor/Makefile config.status: creating mri_segment_wm_damage/Makefile config.status: creating mri_segreg/Makefile config.status: creating mri_segstats/Makefile config.status: creating mri_stats2seg/Makefile config.status: creating mri_strip_nonwhite/Makefile config.status: creating mri_strip_subject_info/Makefile config.status: creating mri_surf2surf/Makefile config.status: creating mri_surf2vol/Makefile config.status: creating mri_surfacemask/Makefile config.status: creating mri_surfcluster/Makefile config.status: creating mri_synthesize/Makefile config.status: creating mri_tessellate/Makefile config.status: creating mri_threshold/Makefile config.status: creating mri_topologycorrection/Makefile config.status: creating mri_train/Makefile config.status: creating mri_classify/Makefile config.status: creating mri_transform/Makefile config.status: creating mri_transform_to_COR/Makefile config.status: creating mri_twoclass/Makefile config.status: creating mri_vol2roi/Makefile config.status: creating mri_vol2surf/Makefile config.status: creating mri_vol2vol/Makefile config.status: creating mris_copy_header/Makefile config.status: creating mris_segmentation_stats/Makefile config.status: creating mris_simulate_atrophy/Makefile config.status: creating mris_rf_label/Makefile config.status: creating mris_rf_train/Makefile config.status: creating mri_rf_long_train/Makefile config.status: creating mri_rf_long_label/Makefile config.status: creating mri_volcluster/Makefile config.status: creating mri_voldiff/Makefile config.status: creating mri_volsynth/Makefile config.status: creating mri_watershed/Makefile config.status: creating mri_watershed/brain_volume/Makefile config.status: creating mri_wbc/Makefile config.status: creating mri_wmfilter/Makefile config.status: creating mri_xcorr/Makefile config.status: creating mri_xvolavg/Makefile config.status: creating mri_z2p/Makefile config.status: creating mri_label_accuracy/Makefile config.status: creating mri_multispectral_segment/Makefile config.status: creating mri_multiscale_segment/Makefile config.status: creating mri_compute_change_map/Makefile config.status: creating mris2rgb/Makefile config.status: creating mris_hausdorff_dist/Makefile config.status: creating mris_map_cuts/Makefile config.status: creating mris_merge_parcellations/Makefile config.status: creating mris_distance_transform/Makefile config.status: creating mris_add_template/Makefile config.status: creating mris_aseg_distance/Makefile config.status: creating mris_density/Makefile config.status: creating mris_fill/Makefile config.status: creating mris_fbirn_annot/Makefile config.status: creating mris_anatomical_stats/Makefile config.status: creating mris_transmantle_dysplasia_paths/Makefile config.status: creating mris_annot_to_segmentation/Makefile config.status: creating mris_apply_reg/Makefile config.status: creating mris_average_curvature/Makefile config.status: creating mris_ca_label/Makefile config.status: creating mris_divide_parcellation/Makefile config.status: creating mris_ca_train/Makefile config.status: creating mris_svm_classify/Makefile config.status: creating mris_svm_train/Makefile config.status: creating mris_calc/Makefile config.status: creating mris_classify_thickness/Makefile config.status: creating mris_compute_acorr/Makefile config.status: creating mris_compute_lgi/Makefile config.status: creating mris_compute_overlap/Makefile config.status: creating mris_compute_parc_overlap/Makefile config.status: creating mris_congeal/Makefile config.status: creating mris_convert/Makefile config.status: creating mris_distance_map/Makefile config.status: creating mris_curvature/Makefile config.status: creating mris_curvature_stats/Makefile config.status: creating mris_decimate/Makefile config.status: creating mris_decimate_gui/Makefile config.status: creating mris_diff/Makefile config.status: creating mris_distance_to_label/Makefile config.status: creating mris_entropy/Makefile config.status: creating mris_errors/Makefile config.status: creating mris_euler_number/Makefile config.status: creating mris_expand/Makefile config.status: creating mris_find_flat_regions/Makefile config.status: creating mris_fix_topology/Makefile config.status: creating mris_topo_fixer/Makefile config.status: creating mris_flatten/Makefile config.status: creating mris_fwhm/Makefile config.status: creating mris_glm/Makefile config.status: creating mris_inflate/Makefile config.status: creating mris_info/Makefile config.status: creating mris_jacobian/Makefile config.status: creating mris_label_area/Makefile config.status: creating mris_label_calc/Makefile config.status: creating mris_label_mode/Makefile config.status: creating mris_label2annot/Makefile config.status: creating mris_make_average_surface/Makefile config.status: creating mris_make_surfaces/Makefile config.status: creating mris_make_map_surfaces/Makefile config.status: creating mris_make_template/Makefile config.status: creating mris_mesh_subdivide/Makefile config.status: creating mris_morph_stats/Makefile config.status: creating mris_deform/Makefile config.status: creating mris_ms_refine/Makefile config.status: creating mris_ms_surface_CNR/Makefile config.status: creating mris_multiscale_stats/Makefile config.status: creating mris_niters2fwhm/Makefile config.status: creating mris_pmake/Makefile config.status: creating mris_register/Makefile config.status: creating mris_register_label_map/Makefile config.status: creating mris_left_right_register/Makefile config.status: creating mris_register_to_volume/Makefile config.status: creating mris_init_global_tractography/Makefile config.status: creating mris_interpolate_warp/Makefile config.status: creating mris_remove_variance/Makefile config.status: creating mris_resample/Makefile config.status: creating mris_rescale/Makefile config.status: creating mris_reverse/Makefile config.status: creating mris_rotate/Makefile config.status: creating mris_sample_label/Makefile config.status: creating mris_sample_parc/Makefile config.status: creating mris_segment_vals/Makefile config.status: creating mris_segment/Makefile config.status: creating mris_seg2annot/Makefile config.status: creating mris_shrinkwrap/Makefile config.status: creating mris_show/Makefile config.status: creating mris_smooth/Makefile config.status: creating mris_parcellate_connectivity/Makefile config.status: creating mris_make_face_parcellation/Makefile config.status: creating mris_sphere/Makefile config.status: creating mris_spherical_average/Makefile config.status: creating mris_average_parcellation/Makefile config.status: creating mris_surface_stats/Makefile config.status: creating mris_surface_to_vol_distances/Makefile config.status: creating mris_talairach/Makefile config.status: creating mris_thickness/Makefile config.status: creating mris_surface_change/Makefile config.status: creating mris_BA_segment/Makefile config.status: creating mris_compute_optimal_kernel/Makefile config.status: creating mris_thickness_comparison/Makefile config.status: creating mris_thickness_diff/Makefile config.status: creating mris_transform/Makefile config.status: creating mris_translate_annotation/Makefile config.status: creating mris_twoclass/Makefile config.status: creating mris_volume/Makefile config.status: creating mris_warp/Makefile config.status: creating mris_volmask/Makefile config.status: creating mris_w_to_curv/Makefile config.status: creating mrisp_paint/Makefile config.status: creating mris_longitudinal_surfaces/Makefile config.status: creating mris_compute_volume_fractions/Makefile config.status: creating nmovie/Makefile config.status: creating oct_train/Makefile config.status: creating oct_register_mosaic/Makefile config.status: creating nmovie_qt/Makefile config.status: creating optseq2/Makefile config.status: creating orient_mri/Makefile config.status: creating qdec/Makefile config.status: creating rbftest/Makefile config.status: creating regdat2xfm/Makefile config.status: creating repair_siemens_file/Makefile config.status: creating rgb/Makefile config.status: creating scripts/Makefile config.status: creating freeview/Makefile config.status: creating connectgraph/Makefile config.status: creating spherical_stats/Makefile config.status: creating spline3/Makefile config.status: creating stat_normalize/Makefile config.status: creating stim_polar/Makefile config.status: creating svm-lib/Makefile config.status: creating swi_processing/Makefile config.status: creating talairach_afd/Makefile config.status: creating talairach_avi/Makefile config.status: creating template/Makefile config.status: creating test_makevol/Makefile config.status: creating test_window_env/Makefile config.status: creating tetgen/Makefile config.status: creating tiff/Makefile config.status: creating tkmedit/Makefile config.status: creating tkregister2/Makefile config.status: creating tkregister2/cmdl/Makefile config.status: creating tksurfer/Makefile config.status: creating trc/Makefile config.status: creating tridec/Makefile config.status: creating unix/Makefile config.status: creating utils/Makefile config.status: creating utils/cephes/Makefile config.status: creating utils/NrrdIO/Makefile config.status: creating utils/test/Makefile config.status: creating utils/test/mrishash/Makefile config.status: creating utilscpp/Makefile config.status: creating utilscpp/test/Makefile config.status: creating qdec_glmfit/Makefile config.status: creating qdecproject/Makefile config.status: creating vtkfsio/Makefile config.status: creating vtkutils/Makefile config.status: creating lineprof/Makefile config.status: creating xml2/Makefile config.status: creating config.h config.status: executing depfiles commands FreeSurfer is now configured for x86_64-unknown-linux-gnu Source directory: . Build directory: /home/scanlab/Desktop/Derek/freesurfer Install directory: /home/scanlab/Desktop/Derek/fs_install C compiler: gcc -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include C++ compiler: g++ -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include Fortran: f77 -g -O3 -msse2 -mfpmath=sse Linker: /usr/bin/ld -m elf_x86_64 -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/lib -L/usr/lib64 -L/usr/X11R6/lib64 -fopenmp -fdata-sections -ffunction-sections -Wl,--gc-sections -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit Libs: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKAlgorithms.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKCommon.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNumerics.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKMetaIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKniftiio.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNrrdIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkpng.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitksys.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitktiff.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkv3p_netlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkzlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkgdcm.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkopenjpeg.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg8.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg12.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg16.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKDICOMParser.a /usr/lib/x86_64-linux-gnu/libuuid.a -lz -lm -lcrypt -ldl -lpthread /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libvolume_io.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libminc.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libnetcdf.a -lvnl_algo -lvnl -lvcl -lnetlib -lv3p_netlib scanlab@hyperion:~/Desktop/Derek/freesurfer$ make -j4 make all-recursive make[1]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer' Making all in include make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include' /usr/local/cuda/bin/nvcc --version > nvcc_version echo "/* output of nvcc --version */" > nvcc_version.h echo "/* example usage:" >> nvcc_version.h echo "#include " >> nvcc_version.h echo "#include \"nvcc_version.h\"" >> nvcc_version.h echo "char buf[nvcc_version_len+1];" >> nvcc_version.h echo "bcopy(nvcc_version,buf,nvcc_version_len);" >> nvcc_version.h echo "buf[nvcc_version_len]=0;" >> nvcc_version.h echo "printf(buf);" >> nvcc_version.h echo "" >> nvcc_version.h echo "nvcc_version.h was created by running:" >> nvcc_version.h echo "nvcc --version > nvcc_version" >> nvcc_version.h echo "xxd -i nvcc_version >> nvcc_version.h" >> nvcc_version.h echo "*/" >> nvcc_version.h xxd -i nvcc_version >> nvcc_version.h make all-recursive make[3]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include' Making all in dicom make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/dicom' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/dicom' Making all in xview make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/xview' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/xview' Making all in pixrect make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/pixrect' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/pixrect' Making all in sys make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/sys' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/sys' Making all in NrrdIO make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/NrrdIO' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/NrrdIO' Making all in topology make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/topology' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/topology' Making all in fs_vnl make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include/fs_vnl' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include/fs_vnl' make[4]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/include' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include' make[3]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include' make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/include' Making all in unix make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/unix' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cuserid.o -MD -MP -MF .deps/cuserid.Tpo -c -o cuserid.o cuserid.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT unix_thread.o -MD -MP -MF .deps/unix_thread.Tpo -c -o unix_thread.o unix_thread.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xwin.o -MD -MP -MF .deps/xwin.Tpo -c -o xwin.o xwin.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ftime.o -MD -MP -MF .deps/ftime.Tpo -c -o ftime.o ftime.c mv -f .deps/ftime.Tpo .deps/ftime.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT windiag.o -MD -MP -MF .deps/windiag.Tpo -c -o windiag.o windiag.c mv -f .deps/unix_thread.Tpo .deps/unix_thread.Po mv -f .deps/cuserid.Tpo .deps/cuserid.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xwindow.o -MD -MP -MF .deps/xwindow.Tpo -c -o xwindow.o xwindow.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT oglutil.o -MD -MP -MF .deps/oglutil.Tpo -c -o oglutil.o oglutil.c mv -f .deps/windiag.Tpo .deps/windiag.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xvmri.o -MD -MP -MF .deps/xvmri.Tpo -c -o xvmri.o xvmri.c mv -f .deps/xwin.Tpo .deps/xwin.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT texfont.o -MD -MP -MF .deps/texfont.Tpo -c -o texfont.o texfont.c mv -f .deps/xwindow.Tpo .deps/xwindow.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xvutil.o -MD -MP -MF .deps/xvutil.Tpo -c -o xvutil.o xvutil.c xvmri.c: In function ���mri_event_handler���: xvmri.c:128:18: warning: variable ���old_val��� set but not used [-Wunused-but-set-variable] BUFTYPE val, old_val ; ^ xvmri.c:122:73: warning: variable ���slice��� set but not used [-Wunused-but-set-variable] int x, y, z, which, depth, view, frame, xi, yi, zi, xk, yk, zk, slice ; ^ xvmri.c:122:36: warning: variable ���view��� set but not used [-Wunused-but-set-variable] int x, y, z, which, depth, view, frame, xi, yi, zi, xk, yk, zk, slice ; ^ xvmri.c: In function ���XVMRIfree���: xvmri.c:1050:8: warning: variable ���mri��� set but not used [-Wunused-but-set-variable] MRI *mri ; ^ xvutil.c: In function ���XVshowImage���: xvutil.c:539:26: warning: variable ���cols��� set but not used [-Wunused-but-set-variable] int i, rows, cols, srows, scols, c ; ^ xvutil.c:539:20: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int i, rows, cols, srows, scols, c ; ^ xvutil.c: In function ���XVshowImageRange���: xvutil.c:725:26: warning: variable ���cols��� set but not used [-Wunused-but-set-variable] int i, rows, cols, srows, scols, c ; ^ xvutil.c:725:20: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int i, rows, cols, srows, scols, c ; ^ xvutil.c: In function ���xv_dimage_event_handler���: xvutil.c:940:14: warning: variable ���window��� set but not used [-Wunused-but-set-variable] Window window ; ^ xvutil.c: In function ���XVdoSync���: xvutil.c:2534:11: warning: variable ���aspect��� set but not used [-Wunused-but-set-variable] float aspect ; ^ xvutil.c:2533:20: warning: variable ���cols��� set but not used [-Wunused-but-set-variable] int i, rows, cols ; ^ xvutil.c:2533:14: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int i, rows, cols ; ^ mv -f .deps/oglutil.Tpo .deps/oglutil.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -DHAVE_OPENGL -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT glStub.o -MD -MP -MF .deps/glStub.Tpo -c -o glStub.o glStub.c mv -f .deps/texfont.Tpo .deps/texfont.Po mv -f .deps/glStub.Tpo .deps/glStub.Po mv -f .deps/xvmri.Tpo .deps/xvmri.Po mv -f .deps/xvutil.Tpo .deps/xvutil.Po rm -f libunix.a ar cru libunix.a cuserid.o unix_thread.o xwin.o ftime.o windiag.o xwindow.o oglutil.o xvmri.o texfont.o xvutil.o glStub.o ranlib libunix.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/unix' Making all in dicom make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/dicom' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT condition.o -MD -MP -MF .deps/condition.Tpo -c -o condition.o condition.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dcmcond.o -MD -MP -MF .deps/dcmcond.Tpo -c -o dcmcond.o dcmcond.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT lst.o -MD -MP -MF .deps/lst.Tpo -c -o lst.o lst.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ctnthread.o -MD -MP -MF .deps/ctnthread.Tpo -c -o ctnthread.o ctnthread.c mv -f .deps/ctnthread.Tpo .deps/ctnthread.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dcmdict.o -MD -MP -MF .deps/dcmdict.Tpo -c -o dcmdict.o dcmdict.c mv -f .deps/dcmcond.Tpo .deps/dcmcond.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dcm.o -MD -MP -MF .deps/dcm.Tpo -c -o dcm.o dcm.c mv -f .deps/condition.Tpo .deps/condition.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dcmsupport.o -MD -MP -MF .deps/dcmsupport.Tpo -c -o dcmsupport.o dcmsupport.c mv -f .deps/lst.Tpo .deps/lst.Po dcm.c: In function ���exportData���: dcm.c:3780:13: warning: variable ���cond��� set but not used [-Wunused-but-set-variable] CONDITION cond; ^ dcm.c: In function ���readPreamble���: dcm.c:5605:13: warning: variable ���cond��� set but not used [-Wunused-but-set-variable] CONDITION cond; ^ dcm.c: In function ���readVRLength���: dcm.c:5749:13: warning: variable ���cond��� set but not used [-Wunused-but-set-variable] CONDITION cond; ^ dcm.c: In function ���scanCompressedPixels���: dcm.c:6058:18: warning: variable ���localPtr��� set but not used [-Wunused-but-set-variable] unsigned char *localPtr; ^ dcm.c: In function ���copyData���: dcm.c:6762:13: warning: variable ���cond��� set but not used [-Wunused-but-set-variable] CONDITION cond; ^ mv -f .deps/dcmdict.Tpo .deps/dcmdict.Po mv -f .deps/dcmsupport.Tpo .deps/dcmsupport.Po mv -f .deps/dcm.Tpo .deps/dcm.Po rm -f libdicom.a ar cru libdicom.a condition.o dcmcond.o lst.o ctnthread.o dcmdict.o dcm.o dcmsupport.o ranlib libdicom.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/dicom' Making all in hipsstubs make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/hipsstubs' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT hipsrepl.o -MD -MP -MF .deps/hipsrepl.Tpo -c -o hipsrepl.o hipsrepl.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT hipsstubs.o -MD -MP -MF .deps/hipsstubs.Tpo -c -o hipsstubs.o hipsstubs.c mv -f .deps/hipsrepl.Tpo .deps/hipsrepl.Po mv -f .deps/hipsstubs.Tpo .deps/hipsstubs.Po rm -f libhipsstubs.a ar cru libhipsstubs.a hipsrepl.o hipsstubs.o ranlib libhipsstubs.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/hipsstubs' Making all in expat make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/expat' gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlparse.o -MD -MP -MF .deps/xmlparse.Tpo -c -o xmlparse.o xmlparse.c gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmltok.o -MD -MP -MF .deps/xmltok.Tpo -c -o xmltok.o xmltok.c gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlrole.o -MD -MP -MF .deps/xmlrole.Tpo -c -o xmlrole.o xmlrole.c gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlfile.o -MD -MP -MF .deps/xmlfile.Tpo -c -o xmlfile.o xmlfile.c mv -f .deps/xmlfile.Tpo .deps/xmlfile.Po gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT codepage.o -MD -MP -MF .deps/codepage.Tpo -c -o codepage.o codepage.c mv -f .deps/codepage.Tpo .deps/codepage.Po gcc -DHAVE_CONFIG_H -I. -I.. -fexceptions -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT unixfilemap.o -MD -MP -MF .deps/unixfilemap.Tpo -c -o unixfilemap.o unixfilemap.c mv -f .deps/unixfilemap.Tpo .deps/unixfilemap.Po mv -f .deps/xmlrole.Tpo .deps/xmlrole.Po mv -f .deps/xmltok.Tpo .deps/xmltok.Po mv -f .deps/xmlparse.Tpo .deps/xmlparse.Po rm -f libexpat.a ar cru libexpat.a xmlparse.o xmltok.o xmlrole.o xmlfile.o codepage.o unixfilemap.o ranlib libexpat.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/expat' Making all in jpeg make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/jpeg' gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcapimin.o -MD -MP -MF .deps/jcapimin.Tpo -c -o jcapimin.o jcapimin.c gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcapistd.o -MD -MP -MF .deps/jcapistd.Tpo -c -o jcapistd.o jcapistd.c gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jctrans.o -MD -MP -MF .deps/jctrans.Tpo -c -o jctrans.o jctrans.c gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcparam.o -MD -MP -MF .deps/jcparam.Tpo -c -o jcparam.o jcparam.c mv -f .deps/jcapistd.Tpo .deps/jcapistd.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdatadst.o -MD -MP -MF .deps/jdatadst.Tpo -c -o jdatadst.o jdatadst.c mv -f .deps/jcapimin.Tpo .deps/jcapimin.Po mv -f .deps/jdatadst.Tpo .deps/jdatadst.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcinit.o -MD -MP -MF .deps/jcinit.Tpo -c -o jcinit.o jcinit.c gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcmaster.o -MD -MP -MF .deps/jcmaster.Tpo -c -o jcmaster.o jcmaster.c mv -f .deps/jcinit.Tpo .deps/jcinit.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcmarker.o -MD -MP -MF .deps/jcmarker.Tpo -c -o jcmarker.o jcmarker.c mv -f .deps/jctrans.Tpo .deps/jctrans.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcmainct.o -MD -MP -MF .deps/jcmainct.Tpo -c -o jcmainct.o jcmainct.c mv -f .deps/jcparam.Tpo .deps/jcparam.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcprepct.o -MD -MP -MF .deps/jcprepct.Tpo -c -o jcprepct.o jcprepct.c mv -f .deps/jcmainct.Tpo .deps/jcmainct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jccoefct.o -MD -MP -MF .deps/jccoefct.Tpo -c -o jccoefct.o jccoefct.c mv -f .deps/jcmaster.Tpo .deps/jcmaster.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jccolor.o -MD -MP -MF .deps/jccolor.Tpo -c -o jccolor.o jccolor.c mv -f .deps/jcprepct.Tpo .deps/jcprepct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcsample.o -MD -MP -MF .deps/jcsample.Tpo -c -o jcsample.o jcsample.c mv -f .deps/jccolor.Tpo .deps/jccolor.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jchuff.o -MD -MP -MF .deps/jchuff.Tpo -c -o jchuff.o jchuff.c mv -f .deps/jccoefct.Tpo .deps/jccoefct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcphuff.o -MD -MP -MF .deps/jcphuff.Tpo -c -o jcphuff.o jcphuff.c mv -f .deps/jcmarker.Tpo .deps/jcmarker.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcdctmgr.o -MD -MP -MF .deps/jcdctmgr.Tpo -c -o jcdctmgr.o jcdctmgr.c mv -f .deps/jcsample.Tpo .deps/jcsample.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jfdctfst.o -MD -MP -MF .deps/jfdctfst.Tpo -c -o jfdctfst.o jfdctfst.c mv -f .deps/jfdctfst.Tpo .deps/jfdctfst.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jfdctflt.o -MD -MP -MF .deps/jfdctflt.Tpo -c -o jfdctflt.o jfdctflt.c mv -f .deps/jcdctmgr.Tpo .deps/jcdctmgr.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jfdctint.o -MD -MP -MF .deps/jfdctint.Tpo -c -o jfdctint.o jfdctint.c mv -f .deps/jfdctflt.Tpo .deps/jfdctflt.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdapimin.o -MD -MP -MF .deps/jdapimin.Tpo -c -o jdapimin.o jdapimin.c mv -f .deps/jfdctint.Tpo .deps/jfdctint.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdapistd.o -MD -MP -MF .deps/jdapistd.Tpo -c -o jdapistd.o jdapistd.c mv -f .deps/jchuff.Tpo .deps/jchuff.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdtrans.o -MD -MP -MF .deps/jdtrans.Tpo -c -o jdtrans.o jdtrans.c mv -f .deps/jdapimin.Tpo .deps/jdapimin.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdatasrc.o -MD -MP -MF .deps/jdatasrc.Tpo -c -o jdatasrc.o jdatasrc.c mv -f .deps/jdtrans.Tpo .deps/jdtrans.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdmaster.o -MD -MP -MF .deps/jdmaster.Tpo -c -o jdmaster.o jdmaster.c mv -f .deps/jdatasrc.Tpo .deps/jdatasrc.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdinput.o -MD -MP -MF .deps/jdinput.Tpo -c -o jdinput.o jdinput.c mv -f .deps/jdapistd.Tpo .deps/jdapistd.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdmarker.o -MD -MP -MF .deps/jdmarker.Tpo -c -o jdmarker.o jdmarker.c mv -f .deps/jcphuff.Tpo .deps/jcphuff.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdhuff.o -MD -MP -MF .deps/jdhuff.Tpo -c -o jdhuff.o jdhuff.c mv -f .deps/jdinput.Tpo .deps/jdinput.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdphuff.o -MD -MP -MF .deps/jdphuff.Tpo -c -o jdphuff.o jdphuff.c mv -f .deps/jdmaster.Tpo .deps/jdmaster.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdmainct.o -MD -MP -MF .deps/jdmainct.Tpo -c -o jdmainct.o jdmainct.c mv -f .deps/jdmainct.Tpo .deps/jdmainct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdcoefct.o -MD -MP -MF .deps/jdcoefct.Tpo -c -o jdcoefct.o jdcoefct.c mv -f .deps/jdphuff.Tpo .deps/jdphuff.Po mv -f .deps/jdhuff.Tpo .deps/jdhuff.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdpostct.o -MD -MP -MF .deps/jdpostct.Tpo -c -o jdpostct.o jdpostct.c gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jddctmgr.o -MD -MP -MF .deps/jddctmgr.Tpo -c -o jddctmgr.o jddctmgr.c mv -f .deps/jdmarker.Tpo .deps/jdmarker.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jidctfst.o -MD -MP -MF .deps/jidctfst.Tpo -c -o jidctfst.o jidctfst.c mv -f .deps/jdpostct.Tpo .deps/jdpostct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jidctflt.o -MD -MP -MF .deps/jidctflt.Tpo -c -o jidctflt.o jidctflt.c mv -f .deps/jidctfst.Tpo .deps/jidctfst.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jidctint.o -MD -MP -MF .deps/jidctint.Tpo -c -o jidctint.o jidctint.c mv -f .deps/jddctmgr.Tpo .deps/jddctmgr.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jidctred.o -MD -MP -MF .deps/jidctred.Tpo -c -o jidctred.o jidctred.c mv -f .deps/jidctflt.Tpo .deps/jidctflt.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdsample.o -MD -MP -MF .deps/jdsample.Tpo -c -o jdsample.o jdsample.c mv -f .deps/jdcoefct.Tpo .deps/jdcoefct.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdcolor.o -MD -MP -MF .deps/jdcolor.Tpo -c -o jdcolor.o jdcolor.c mv -f .deps/jidctint.Tpo .deps/jidctint.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jquant1.o -MD -MP -MF .deps/jquant1.Tpo -c -o jquant1.o jquant1.c mv -f .deps/jidctred.Tpo .deps/jidctred.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jquant2.o -MD -MP -MF .deps/jquant2.Tpo -c -o jquant2.o jquant2.c mv -f .deps/jdcolor.Tpo .deps/jdcolor.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jdmerge.o -MD -MP -MF .deps/jdmerge.Tpo -c -o jdmerge.o jdmerge.c mv -f .deps/jdsample.Tpo .deps/jdsample.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jcomapi.o -MD -MP -MF .deps/jcomapi.Tpo -c -o jcomapi.o jcomapi.c mv -f .deps/jdmerge.Tpo .deps/jdmerge.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jutils.o -MD -MP -MF .deps/jutils.Tpo -c -o jutils.o jutils.c mv -f .deps/jcomapi.Tpo .deps/jcomapi.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jerror.o -MD -MP -MF .deps/jerror.Tpo -c -o jerror.o jerror.c mv -f .deps/jquant1.Tpo .deps/jquant1.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jmemmgr.o -MD -MP -MF .deps/jmemmgr.Tpo -c -o jmemmgr.o jmemmgr.c mv -f .deps/jutils.Tpo .deps/jutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT jmemnobs.o -MD -MP -MF .deps/jmemnobs.Tpo -c -o jmemnobs.o jmemnobs.c mv -f .deps/jmemnobs.Tpo .deps/jmemnobs.Po mv -f .deps/jerror.Tpo .deps/jerror.Po mv -f .deps/jquant2.Tpo .deps/jquant2.Po mv -f .deps/jmemmgr.Tpo .deps/jmemmgr.Po rm -f libjpeg.a ar cru libjpeg.a jcapimin.o jcapistd.o jctrans.o jcparam.o jdatadst.o jcinit.o jcmaster.o jcmarker.o jcmainct.o jcprepct.o jccoefct.o jccolor.o jcsample.o jchuff.o jcphuff.o jcdctmgr.o jfdctfst.o jfdctflt.o jfdctint.o jdapimin.o jdapistd.o jdtrans.o jdatasrc.o jdmaster.o jdinput.o jdmarker.o jdhuff.o jdphuff.o jdmainct.o jdcoefct.o jdpostct.o jddctmgr.o jidctfst.o jidctflt.o jidctint.o jidctred.o jdsample.o jdcolor.o jquant1.o jquant2.o jdmerge.o jcomapi.o jutils.o jerror.o jmemmgr.o jmemnobs.o ranlib libjpeg.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/jpeg' Making all in tiff make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/tiff' gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_aux.o -MD -MP -MF .deps/tif_aux.Tpo -c -o tif_aux.o tif_aux.c gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_close.o -MD -MP -MF .deps/tif_close.Tpo -c -o tif_close.o tif_close.c gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_codec.o -MD -MP -MF .deps/tif_codec.Tpo -c -o tif_codec.o tif_codec.c gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_color.o -MD -MP -MF .deps/tif_color.Tpo -c -o tif_color.o tif_color.c mv -f .deps/tif_close.Tpo .deps/tif_close.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_compress.o -MD -MP -MF .deps/tif_compress.Tpo -c -o tif_compress.o tif_compress.c mv -f .deps/tif_codec.Tpo .deps/tif_codec.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_dir.o -MD -MP -MF .deps/tif_dir.Tpo -c -o tif_dir.o tif_dir.c mv -f .deps/tif_color.Tpo .deps/tif_color.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_dirinfo.o -MD -MP -MF .deps/tif_dirinfo.Tpo -c -o tif_dirinfo.o tif_dirinfo.c mv -f .deps/tif_compress.Tpo .deps/tif_compress.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_dirread.o -MD -MP -MF .deps/tif_dirread.Tpo -c -o tif_dirread.o tif_dirread.c mv -f .deps/tif_aux.Tpo .deps/tif_aux.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_dirwrite.o -MD -MP -MF .deps/tif_dirwrite.Tpo -c -o tif_dirwrite.o tif_dirwrite.c mv -f .deps/tif_dirinfo.Tpo .deps/tif_dirinfo.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_dumpmode.o -MD -MP -MF .deps/tif_dumpmode.Tpo -c -o tif_dumpmode.o tif_dumpmode.c mv -f .deps/tif_dumpmode.Tpo .deps/tif_dumpmode.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_error.o -MD -MP -MF .deps/tif_error.Tpo -c -o tif_error.o tif_error.c mv -f .deps/tif_error.Tpo .deps/tif_error.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_extension.o -MD -MP -MF .deps/tif_extension.Tpo -c -o tif_extension.o tif_extension.c mv -f .deps/tif_extension.Tpo .deps/tif_extension.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_flush.o -MD -MP -MF .deps/tif_flush.Tpo -c -o tif_flush.o tif_flush.c mv -f .deps/tif_flush.Tpo .deps/tif_flush.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_getimage.o -MD -MP -MF .deps/tif_getimage.Tpo -c -o tif_getimage.o tif_getimage.c mv -f .deps/tif_dirread.Tpo .deps/tif_dirread.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_jpeg.o -MD -MP -MF .deps/tif_jpeg.Tpo -c -o tif_jpeg.o tif_jpeg.c mv -f .deps/tif_dir.Tpo .deps/tif_dir.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_luv.o -MD -MP -MF .deps/tif_luv.Tpo -c -o tif_luv.o tif_luv.c mv -f .deps/tif_dirwrite.Tpo .deps/tif_dirwrite.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_lzw.o -MD -MP -MF .deps/tif_lzw.Tpo -c -o tif_lzw.o tif_lzw.c mv -f .deps/tif_lzw.Tpo .deps/tif_lzw.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_next.o -MD -MP -MF .deps/tif_next.Tpo -c -o tif_next.o tif_next.c mv -f .deps/tif_next.Tpo .deps/tif_next.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_ojpeg.o -MD -MP -MF .deps/tif_ojpeg.Tpo -c -o tif_ojpeg.o tif_ojpeg.c mv -f .deps/tif_ojpeg.Tpo .deps/tif_ojpeg.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_open.o -MD -MP -MF .deps/tif_open.Tpo -c -o tif_open.o tif_open.c mv -f .deps/tif_open.Tpo .deps/tif_open.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_packbits.o -MD -MP -MF .deps/tif_packbits.Tpo -c -o tif_packbits.o tif_packbits.c mv -f .deps/tif_jpeg.Tpo .deps/tif_jpeg.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_pixarlog.o -MD -MP -MF .deps/tif_pixarlog.Tpo -c -o tif_pixarlog.o tif_pixarlog.c mv -f .deps/tif_pixarlog.Tpo .deps/tif_pixarlog.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_predict.o -MD -MP -MF .deps/tif_predict.Tpo -c -o tif_predict.o tif_predict.c mv -f .deps/tif_packbits.Tpo .deps/tif_packbits.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_print.o -MD -MP -MF .deps/tif_print.Tpo -c -o tif_print.o tif_print.c mv -f .deps/tif_predict.Tpo .deps/tif_predict.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_read.o -MD -MP -MF .deps/tif_read.Tpo -c -o tif_read.o tif_read.c mv -f .deps/tif_luv.Tpo .deps/tif_luv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_strip.o -MD -MP -MF .deps/tif_strip.Tpo -c -o tif_strip.o tif_strip.c mv -f .deps/tif_print.Tpo .deps/tif_print.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_swab.o -MD -MP -MF .deps/tif_swab.Tpo -c -o tif_swab.o tif_swab.c mv -f .deps/tif_strip.Tpo .deps/tif_strip.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_thunder.o -MD -MP -MF .deps/tif_thunder.Tpo -c -o tif_thunder.o tif_thunder.c mv -f .deps/tif_read.Tpo .deps/tif_read.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_tile.o -MD -MP -MF .deps/tif_tile.Tpo -c -o tif_tile.o tif_tile.c mv -f .deps/tif_swab.Tpo .deps/tif_swab.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_unix.o -MD -MP -MF .deps/tif_unix.Tpo -c -o tif_unix.o tif_unix.c mv -f .deps/tif_thunder.Tpo .deps/tif_thunder.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_version.o -MD -MP -MF .deps/tif_version.Tpo -c -o tif_version.o tif_version.c mv -f .deps/tif_version.Tpo .deps/tif_version.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_warning.o -MD -MP -MF .deps/tif_warning.Tpo -c -o tif_warning.o tif_warning.c mv -f .deps/tif_unix.Tpo .deps/tif_unix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_write.o -MD -MP -MF .deps/tif_write.Tpo -c -o tif_write.o tif_write.c mv -f .deps/tif_tile.Tpo .deps/tif_tile.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../jpeg -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tif_zip.o -MD -MP -MF .deps/tif_zip.Tpo -c -o tif_zip.o tif_zip.c mv -f .deps/tif_warning.Tpo .deps/tif_warning.Po mv -f .deps/tif_zip.Tpo .deps/tif_zip.Po mv -f .deps/tif_write.Tpo .deps/tif_write.Po mv -f .deps/tif_getimage.Tpo .deps/tif_getimage.Po rm -f libtiff.a ar cru libtiff.a tif_aux.o tif_close.o tif_codec.o tif_color.o tif_compress.o tif_dir.o tif_dirinfo.o tif_dirread.o tif_dirwrite.o tif_dumpmode.o tif_error.o tif_extension.o tif_flush.o tif_getimage.o tif_jpeg.o tif_luv.o tif_lzw.o tif_next.o tif_ojpeg.o tif_open.o tif_packbits.o tif_pixarlog.o tif_predict.o tif_print.o tif_read.o tif_strip.o tif_swab.o tif_thunder.o tif_tile.o tif_unix.o tif_version.o tif_warning.o tif_write.o tif_zip.o ranlib libtiff.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/tiff' Making all in xml2 make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/xml2' gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT c14n.o -MD -MP -MF .deps/c14n.Tpo -c -o c14n.o c14n.c gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT catalog.o -MD -MP -MF .deps/catalog.Tpo -c -o catalog.o catalog.c gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT chvalid.o -MD -MP -MF .deps/chvalid.Tpo -c -o chvalid.o chvalid.c gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT debugXML.o -MD -MP -MF .deps/debugXML.Tpo -c -o debugXML.o debugXML.c mv -f .deps/chvalid.Tpo .deps/chvalid.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dict.o -MD -MP -MF .deps/dict.Tpo -c -o dict.o dict.c mv -f .deps/dict.Tpo .deps/dict.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT DOCBparser.o -MD -MP -MF .deps/DOCBparser.Tpo -c -o DOCBparser.o DOCBparser.c mv -f .deps/DOCBparser.Tpo .deps/DOCBparser.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encoding.o -MD -MP -MF .deps/encoding.Tpo -c -o encoding.o encoding.c mv -f .deps/c14n.Tpo .deps/c14n.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT entities.o -MD -MP -MF .deps/entities.Tpo -c -o entities.o entities.c mv -f .deps/entities.Tpo .deps/entities.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT error.o -MD -MP -MF .deps/error.Tpo -c -o error.o error.c mv -f .deps/catalog.Tpo .deps/catalog.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT globals.o -MD -MP -MF .deps/globals.Tpo -c -o globals.o globals.c mv -f .deps/encoding.Tpo .deps/encoding.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT hash.o -MD -MP -MF .deps/hash.Tpo -c -o hash.o hash.c mv -f .deps/debugXML.Tpo .deps/debugXML.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT HTMLparser.o -MD -MP -MF .deps/HTMLparser.Tpo -c -o HTMLparser.o HTMLparser.c mv -f .deps/globals.Tpo .deps/globals.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT HTMLtree.o -MD -MP -MF .deps/HTMLtree.Tpo -c -o HTMLtree.o HTMLtree.c mv -f .deps/error.Tpo .deps/error.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT list.o -MD -MP -MF .deps/list.Tpo -c -o list.o list.c mv -f .deps/list.Tpo .deps/list.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT nanoftp.o -MD -MP -MF .deps/nanoftp.Tpo -c -o nanoftp.o nanoftp.c mv -f .deps/hash.Tpo .deps/hash.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT nanohttp.o -MD -MP -MF .deps/nanohttp.Tpo -c -o nanohttp.o nanohttp.c mv -f .deps/HTMLtree.Tpo .deps/HTMLtree.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT parser.o -MD -MP -MF .deps/parser.Tpo -c -o parser.o parser.c mv -f .deps/nanoftp.Tpo .deps/nanoftp.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT parserInternals.o -MD -MP -MF .deps/parserInternals.Tpo -c -o parserInternals.o parserInternals.c mv -f .deps/nanohttp.Tpo .deps/nanohttp.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT pattern.o -MD -MP -MF .deps/pattern.Tpo -c -o pattern.o pattern.c mv -f .deps/parserInternals.Tpo .deps/parserInternals.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT relaxng.o -MD -MP -MF .deps/relaxng.Tpo -c -o relaxng.o relaxng.c mv -f .deps/pattern.Tpo .deps/pattern.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT SAX2.o -MD -MP -MF .deps/SAX2.Tpo -c -o SAX2.o SAX2.c mv -f .deps/HTMLparser.Tpo .deps/HTMLparser.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT SAX.o -MD -MP -MF .deps/SAX.Tpo -c -o SAX.o SAX.c mv -f .deps/SAX.Tpo .deps/SAX.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT schematron.o -MD -MP -MF .deps/schematron.Tpo -c -o schematron.o schematron.c mv -f .deps/SAX2.Tpo .deps/SAX2.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT threads.o -MD -MP -MF .deps/threads.Tpo -c -o threads.o threads.c mv -f .deps/threads.Tpo .deps/threads.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tree.o -MD -MP -MF .deps/tree.Tpo -c -o tree.o tree.c mv -f .deps/schematron.Tpo .deps/schematron.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT uri.o -MD -MP -MF .deps/uri.Tpo -c -o uri.o uri.c mv -f .deps/uri.Tpo .deps/uri.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT valid.o -MD -MP -MF .deps/valid.Tpo -c -o valid.o valid.c mv -f .deps/relaxng.Tpo .deps/relaxng.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xinclude.o -MD -MP -MF .deps/xinclude.Tpo -c -o xinclude.o xinclude.c mv -f .deps/valid.Tpo .deps/valid.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xlink.o -MD -MP -MF .deps/xlink.Tpo -c -o xlink.o xlink.c mv -f .deps/xinclude.Tpo .deps/xinclude.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlIO.o -MD -MP -MF .deps/xmlIO.Tpo -c -o xmlIO.o xmlIO.c mv -f .deps/xlink.Tpo .deps/xlink.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlmemory.o -MD -MP -MF .deps/xmlmemory.Tpo -c -o xmlmemory.o xmlmemory.c mv -f .deps/tree.Tpo .deps/tree.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlmodule.o -MD -MP -MF .deps/xmlmodule.Tpo -c -o xmlmodule.o xmlmodule.c mv -f .deps/parser.Tpo .deps/parser.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlreader.o -MD -MP -MF .deps/xmlreader.Tpo -c -o xmlreader.o xmlreader.c mv -f .deps/xmlmodule.Tpo .deps/xmlmodule.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlregexp.o -MD -MP -MF .deps/xmlregexp.Tpo -c -o xmlregexp.o xmlregexp.c mv -f .deps/xmlmemory.Tpo .deps/xmlmemory.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlsave.o -MD -MP -MF .deps/xmlsave.Tpo -c -o xmlsave.o xmlsave.c mv -f .deps/xmlIO.Tpo .deps/xmlIO.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlschemas.o -MD -MP -MF .deps/xmlschemas.Tpo -c -o xmlschemas.o xmlschemas.c mv -f .deps/xmlsave.Tpo .deps/xmlsave.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlschemastypes.o -MD -MP -MF .deps/xmlschemastypes.Tpo -c -o xmlschemastypes.o xmlschemastypes.c xmlschemastypes.c: In function ���xmlSchemaValidateLengthFacetInternal���: xmlschemastypes.c:5727:21: warning: comparison between ���xmlSchemaTypeType��� and ���enum ��� [-Wenum-compare] if (valType == XML_SCHEMAS_STRING) ^ xmlschemastypes.c:5758:5: warning: case value ���28��� not in enumerated type ���xmlSchemaTypeType��� [-Wswitch] case XML_SCHEMAS_NOTATION: ^ xmlschemastypes.c:5753:5: warning: case value ���29��� not in enumerated type ���xmlSchemaTypeType��� [-Wswitch] case XML_SCHEMAS_ANYURI: ^ mv -f .deps/xmlreader.Tpo .deps/xmlreader.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlstring.o -MD -MP -MF .deps/xmlstring.Tpo -c -o xmlstring.o xmlstring.c mv -f .deps/xmlstring.Tpo .deps/xmlstring.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlunicode.o -MD -MP -MF .deps/xmlunicode.Tpo -c -o xmlunicode.o xmlunicode.c mv -f .deps/xmlregexp.Tpo .deps/xmlregexp.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xmlwriter.o -MD -MP -MF .deps/xmlwriter.Tpo -c -o xmlwriter.o xmlwriter.c mv -f .deps/xmlunicode.Tpo .deps/xmlunicode.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xpath.o -MD -MP -MF .deps/xpath.Tpo -c -o xpath.o xpath.c xpath.c: In function ���xmlXPathNodeCollectAndTest���: xpath.c:13433:28: warning: comparison between ���xmlElementType��� and ���xmlXPathTypeVal��� [-Wenum-compare] else if (cur->type == type) ^ xpath.c:13435:20: warning: comparison between ���xmlXPathTypeVal��� and ���enum ��� [-Wenum-compare] if (type == XML_NAMESPACE_DECL) ^ mv -f .deps/xmlwriter.Tpo .deps/xmlwriter.Po gcc -DHAVE_CONFIG_H -I. -I.. -DHAVE_CONFIG_H -D_REENTRANT -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xpointer.o -MD -MP -MF .deps/xpointer.Tpo -c -o xpointer.o xpointer.c xpointer.c: In function ���xmlXPtrNewRangeNodePoint���: xpointer.c:478:19: warning: comparison between ���xmlElementType��� and ���enum ��� [-Wenum-compare] if (start->type != XPATH_POINT) ^ mv -f .deps/xmlschemastypes.Tpo .deps/xmlschemastypes.Po mv -f .deps/xpointer.Tpo .deps/xpointer.Po mv -f .deps/xpath.Tpo .deps/xpath.Po mv -f .deps/xmlschemas.Tpo .deps/xmlschemas.Po rm -f libxml2.a ar cru libxml2.a c14n.o catalog.o chvalid.o debugXML.o dict.o DOCBparser.o encoding.o entities.o error.o globals.o hash.o HTMLparser.o HTMLtree.o list.o nanoftp.o nanohttp.o parser.o parserInternals.o pattern.o relaxng.o SAX2.o SAX.o schematron.o threads.o tree.o uri.o valid.o xinclude.o xlink.o xmlIO.o xmlmemory.o xmlmodule.o xmlreader.o xmlregexp.o xmlsave.o xmlschemas.o xmlschemastypes.o xmlstring.o xmlunicode.o xmlwriter.o xpath.o xpointer.o ranlib libxml2.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/xml2' Making all in rgb make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/rgb' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT close.o -MD -MP -MF .deps/close.Tpo -c -o close.o close.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT name.o -MD -MP -MF .deps/name.Tpo -c -o name.o name.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rdwr.o -MD -MP -MF .deps/rdwr.Tpo -c -o rdwr.o rdwr.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT row.o -MD -MP -MF .deps/row.Tpo -c -o row.o row.c mv -f .deps/name.Tpo .deps/name.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT filbuf.o -MD -MP -MF .deps/filbuf.Tpo -c -o filbuf.o filbuf.c filbuf.c: In function ���ifilbuf���: filbuf.c:10:7: warning: variable ���size��� set but not used [-Wunused-but-set-variable] int size; ^ mv -f .deps/close.Tpo .deps/close.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT open.o -MD -MP -MF .deps/open.Tpo -c -o open.o open.c mv -f .deps/filbuf.Tpo .deps/filbuf.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rgbutils.o -MD -MP -MF .deps/rgbutils.Tpo -c -o rgbutils.o rgbutils.c mv -f .deps/rdwr.Tpo .deps/rdwr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT flsbuf.o -MD -MP -MF .deps/flsbuf.Tpo -c -o flsbuf.o flsbuf.c flsbuf.c: In function ���iflsbuf���: flsbuf.c:12:7: warning: variable ���size��� set but not used [-Wunused-but-set-variable] int size; ^ mv -f .deps/flsbuf.Tpo .deps/flsbuf.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT pix.o -MD -MP -MF .deps/pix.Tpo -c -o pix.o pix.c mv -f .deps/row.Tpo .deps/row.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rle.o -MD -MP -MF .deps/rle.Tpo -c -o rle.o rle.c mv -f .deps/pix.Tpo .deps/pix.Po mv -f .deps/rgbutils.Tpo .deps/rgbutils.Po mv -f .deps/open.Tpo .deps/open.Po mv -f .deps/rle.Tpo .deps/rle.Po rm -f librgb.a ar cru librgb.a close.o name.o rdwr.o row.o filbuf.o open.o rgbutils.o flsbuf.o pix.o rle.o ranlib librgb.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/rgb' Making all in log make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/log' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT congraph.o -MD -MP -MF .deps/congraph.Tpo -c -o congraph.o congraph.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT h_logz.o -MD -MP -MF .deps/h_logz.Tpo -c -o h_logz.o h_logz.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT map.o -MD -MP -MF .deps/map.Tpo -c -o map.o map.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT connect.o -MD -MP -MF .deps/connect.Tpo -c -o connect.o connect.c connect.c: In function ���ConnectedComponents���: connect.c:139:55: warning: variable ���color��� set but not used [-Wunused-but-set-variable] int ring, nobjects, spoke, nrings, nspokes, color, objno, freeno, ^ connect.c:139:46: warning: variable ���nspokes��� set but not used [-Wunused-but-set-variable] int ring, nobjects, spoke, nrings, nspokes, color, objno, freeno, ^ connect.c:139:38: warning: variable ���nrings��� set but not used [-Wunused-but-set-variable] int ring, nobjects, spoke, nrings, nspokes, color, objno, freeno, ^ connect.c: In function ���CobjAdd���: connect.c:450:34: warning: variable ���sfirst��� set but not used [-Wunused-but-set-variable] RLE *new, *rle, *prev, *first,sfirst ; ^ connect.c:450:9: warning: variable ���new��� set but not used [-Wunused-but-set-variable] RLE *new, *rle, *prev, *first,sfirst ; ^ connect.c:449:27: warning: variable ���which��� set but not used [-Wunused-but-set-variable] int end, added, rowno, which ; ^ connect.c: In function ���mergeObjectChain���: connect.c:631:13: warning: variable ���next��� set but not used [-Wunused-but-set-variable] COBJ *next ; ^ connect.c: In function ���ConnTableMatch���: connect.c:871:14: warning: variable ���std_dev_y��� set but not used [-Wunused-but-set-variable] std_dev_x, std_dev_y, nbad, ring ; ^ connect.c:871:3: warning: variable ���std_dev_x��� set but not used [-Wunused-but-set-variable] std_dev_x, std_dev_y, nbad, ring ; ^ map.c: In function ���MapSoapBubbleRelax���: map.c:310:11: warning: variable ���vcell��� set but not used [-Wunused-but-set-variable] UCHAR *vcell ; ^ map.c:309:10: warning: variable ���trialno��� set but not used [-Wunused-but-set-variable] *cell, trialno ; ^ h_logz.c: In function ���mapInitLogPix���: h_logz.c:915:3: warning: variable ���wscale��� set but not used [-Wunused-but-set-variable] wscale ; ^ h_logz.c:914:39: warning: variable ���ring_step��� set but not used [-Wunused-but-set-variable] double weight, max_ring, min_ring, ring_step, log_range, nrings_m1, ^ h_logz.c:913:36: warning: variable ���rval��� set but not used [-Wunused-but-set-variable] int i, j, ring, spoke, area, rval, nrings, rows, cols ; ^ congraph.c: In function ���initEightConnected���: congraph.c:400:12: warning: variable ���pix��� set but not used [-Wunused-but-set-variable] LOGPIX *pix ; ^ congraph.c:399:47: warning: variable ���nspokes��� set but not used [-Wunused-but-set-variable] int spoke, ring, ncols, nrows, nrings, nspokes ; ^ congraph.c:399:32: warning: variable ���nrows��� set but not used [-Wunused-but-set-variable] int spoke, ring, ncols, nrows, nrings, nspokes ; ^ congraph.c:399:25: warning: variable ���ncols��� set but not used [-Wunused-but-set-variable] int spoke, ring, ncols, nrows, nrings, nspokes ; ^ h_logz.c: In function ���LogMapDiffusePerona���: h_logz.c:1408:11: warning: variable ���weight��� set but not used [-Wunused-but-set-variable] float weight, c[NBD_SIZE], fvals[NBD_SIZE], dst_val, rho,time,end_time; ^ h_logz.c:1406:47: warning: variable ���nspokes��� set but not used [-Wunused-but-set-variable] end_ring, start_ring, nspokes, new_start_ring, new_end_ring, ^ h_logz.c:1405:37: warning: variable ���cols��� set but not used [-Wunused-but-set-variable] int ring, spoke = 0, i, rows, cols, n_ring, n_spoke, ci, j, ^ h_logz.c:1405:31: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int ring, spoke = 0, i, rows, cols, n_ring, n_spoke, ci, j, ^ mv -f .deps/map.Tpo .deps/map.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT lmedian.o -MD -MP -MF .deps/lmedian.Tpo -c -o lmedian.o lmedian.c mv -f .deps/congraph.Tpo .deps/congraph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT runfuncs.o -MD -MP -MF .deps/runfuncs.Tpo -c -o runfuncs.o runfuncs.c runfuncs.c: In function ���runput_1���: runfuncs.c:2965:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_2���: runfuncs.c:2974:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_3���: runfuncs.c:2984:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_4���: runfuncs.c:2995:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_5���: runfuncs.c:3007:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_6���: runfuncs.c:3020:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_7���: runfuncs.c:3034:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_8���: runfuncs.c:3049:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_9���: runfuncs.c:3065:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_10���: runfuncs.c:3082:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_11���: runfuncs.c:3100:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_12���: runfuncs.c:3119:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_13���: runfuncs.c:3139:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_14���: runfuncs.c:3160:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_15���: runfuncs.c:3182:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_16���: runfuncs.c:3205:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_17���: runfuncs.c:3229:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_18���: runfuncs.c:3254:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_19���: runfuncs.c:3280:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_20���: runfuncs.c:3307:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_21���: runfuncs.c:3335:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_22���: runfuncs.c:3364:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_23���: runfuncs.c:3394:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_24���: runfuncs.c:3425:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_25���: runfuncs.c:3457:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_26���: runfuncs.c:3490:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_27���: runfuncs.c:3524:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_28���: runfuncs.c:3559:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_29���: runfuncs.c:3595:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_30���: runfuncs.c:3632:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_31���: runfuncs.c:3670:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ runfuncs.c: In function ���runput_32���: runfuncs.c:3709:16: warning: variable ���sum��� set but not used [-Wunused-but-set-variable] register int sum; ^ mv -f .deps/lmedian.Tpo .deps/lmedian.Po mv -f .deps/connect.Tpo .deps/connect.Po mv -f .deps/runfuncs.Tpo .deps/runfuncs.Po mv -f .deps/h_logz.Tpo .deps/h_logz.Po rm -f liblog.a ar cru liblog.a congraph.o h_logz.o map.o connect.o lmedian.o runfuncs.o ranlib liblog.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/log' Making all in gpu_utils make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/gpu_utils' g++ -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -I/usr/local/cuda/include -DFS_CUDA -MT cudadetect-cudadetect.o -MD -MP -MF .deps/cudadetect-cudadetect.Tpo -c -o cudadetect-cudadetect.o `test -f 'cudadetect.cpp' || echo './'`cudadetect.cpp mv -f .deps/cudadetect-cudadetect.Tpo .deps/cudadetect-cudadetect.Po /bin/bash ../libtool --tag=CXX --mode=link g++ -I/usr/local/cuda/include -DFS_CUDA -rdynamic -ldl -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/lib -L/usr/lib64 -L/usr/X11R6/lib64 -fopenmp -fdata-sections -ffunction-sections -Wl,--gc-sections -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit -o cudadetect cudadetect-cudadetect.o -L/usr/local/cuda/lib -lcuda -lcudart /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKAlgorithms.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKCommon.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNumerics.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKMetaIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKniftiio.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNrrdIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkpng.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitksys.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitktiff.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkv3p_netlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkzlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkgdcm.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkopenjpeg.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg8.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg12.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg16.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKDICOMParser.a /usr/lib/x86_64-linux-gnu/libuuid.a -lz -lm -lcrypt -ldl -lpthread /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libvolume_io.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libminc.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libnetcdf.a -lvnl_algo -lvnl -lvcl -lnetlib -lv3p_netlib libtool: link: g++ -I/usr/local/cuda/include -DFS_CUDA -rdynamic -fopenmp -fdata-sections -ffunction-sections -Wl,--gc-sections -o cudadetect cudadetect-cudadetect.o -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/qt/4.7.1/lib -L/usr/lib64 -L/usr/X11R6/lib64 -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/lib -L/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit -L/usr/local/cuda/lib -lcuda -lcudart /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKAlgorithms.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKCommon.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNumerics.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKMetaIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKniftiio.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKNrrdIO.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkpng.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitksys.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitktiff.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkv3p_netlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkzlib.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkgdcm.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkopenjpeg.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg8.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg12.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libitkjpeg16.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/lib/InsightToolkit/libITKDICOMParser.a /usr/lib/x86_64-linux-gnu/libuuid.a -lz -lm -lcrypt -ldl -lpthread /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libvolume_io.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libminc.a /home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/lib/libnetcdf.a -lvnl_algo -lvnl -lvcl -lnetlib -lv3p_netlib -fopenmp make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/gpu_utils' Making all in opencl_algorithms make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/opencl_algorithms' g++ -DHAVE_CONFIG_H -I. -I.. -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT libopencl_algorithms_a-oclDijkstraKernel.o -MD -MP -MF .deps/libopencl_algorithms_a-oclDijkstraKernel.Tpo -c -o libopencl_algorithms_a-oclDijkstraKernel.o `test -f 'oclDijkstraKernel.cpp' || echo './'`oclDijkstraKernel.cpp mv -f .deps/libopencl_algorithms_a-oclDijkstraKernel.Tpo .deps/libopencl_algorithms_a-oclDijkstraKernel.Po rm -f libopencl_algorithms.a ar cru libopencl_algorithms.a libopencl_algorithms_a-oclDijkstraKernel.o ranlib libopencl_algorithms.a make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/opencl_algorithms' Making all in utils make[2]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/utils' Making all in . make[3]: Entering directory '/home/scanlab/Desktop/Derek/freesurfer/utils' gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT afni.o -MD -MP -MF .deps/afni.Tpo -c -o afni.o afni.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT annotation.o -MD -MP -MF .deps/annotation.Tpo -c -o annotation.o annotation.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT art1.o -MD -MP -MF .deps/art1.Tpo -c -o art1.o art1.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT artmap.o -MD -MP -MF .deps/artmap.Tpo -c -o artmap.o artmap.c art1.c: In function ���Art1Process���: art1.c:254:11: warning: variable ���nclass��� set but not used [-Wunused-but-set-variable] int nclass, i, class ; ^ art1.c: In function ���artFeedForward���: art1.c:372:11: warning: variable ���f2��� set but not used [-Wunused-but-set-variable] double f2, max_out ; ^ art1.c: In function ���artFastLearn���: art1.c:469:11: warning: variable ���norm_I_int_zj��� set but not used [-Wunused-but-set-variable] double norm_I_int_zj ; ^ artmap.c: In function ���artFeedForward���: artmap.c:465:11: warning: variable ���f2��� set but not used [-Wunused-but-set-variable] double f2, max_out ; ^ artmap.c: In function ���artFastLearn���: artmap.c:568:11: warning: variable ���norm_I_int_zj��� set but not used [-Wunused-but-set-variable] double norm_I_int_zj ; ^ annotation.c: In function ���MRISdivideAnnotationUnit���: annotation.c:479:41: warning: variable ���mx��� set but not used [-Wunused-but-set-variable] min_dot, max_dot, e1x, e1y, e1z, dot, mx ; ^ annotation.c: In function ���MRISmergeAnnotations���: annotation.c:624:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ afni.c: In function ���afniRead���: afni.c:680:7: warning: variable ���bytes��� set but not used [-Wunused-but-set-variable] int bytes; ^ mv -f .deps/art1.Tpo .deps/art1.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT aseg_edit_svm.o -MD -MP -MF .deps/aseg_edit_svm.Tpo -c -o aseg_edit_svm.o aseg_edit_svm.c mv -f .deps/artmap.Tpo .deps/artmap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT autoencoder.o -MD -MP -MF .deps/autoencoder.Tpo -c -o autoencoder.o autoencoder.c autoencoder.c: In function ���AEalloc���: autoencoder.c:211:16: warning: variable ���f1��� set but not used [-Wunused-but-set-variable] double f0, f1 ; ^ autoencoder.c:211:12: warning: variable ���f0��� set but not used [-Wunused-but-set-variable] double f0, f1 ; ^ autoencoder.c: In function ���SAEcomputeRMS���: autoencoder.c:409:11: warning: variable ���v_output��� set but not used [-Wunused-but-set-variable] VECTOR *v_output ; ^ autoencoder.c: In function ���SAEtrainFromMRI���: autoencoder.c:535:14: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:535:10: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:591:31: warning: variable ���init_total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:20: warning: variable ���total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:15: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:11: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:467:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma ; ^ autoencoder.c: In function ���SAEtrainFromVoxlist���: autoencoder.c:694:12: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:694:8: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:750:31: warning: variable ���init_total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:20: warning: variable ���total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:15: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:11: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:632:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma ; ^ autoencoder.c: In function ���aeApplyAccumulatedGradient���: autoencoder.c:1068:29: warning: variable ���orig_dt��� set but not used [-Wunused-but-set-variable] double beta, best_dt, orig_dt, rms, best_rms ; ^ autoencoder.c:1024:19: warning: variable ���nhidden��� set but not used [-Wunused-but-set-variable] int ninputs, nhidden, noutputs ; ^ autoencoder.c:1024:10: warning: variable ���ninputs��� set but not used [-Wunused-but-set-variable] int ninputs, nhidden, noutputs ; ^ autoencoder.c: In function ���AEtrain���: autoencoder.c:1416:29: warning: variable ���orig_dt��� set but not used [-Wunused-but-set-variable] double beta, best_dt, orig_dt, rms, best_rms ; ^ autoencoder.c: In function ���SAEwrite���: autoencoder.c:1628:12: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int i, n ; ^ autoencoder.c: In function ���SAEread���: autoencoder.c:1689:45: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int whalf, nencoders, i, type, nlevels, n ; ^ autoencoder.c: In function ���CSAEcreateOutputs���: autoencoder.c:1853:29: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int layer, x, y, z, h, whalf ; ^ autoencoder.c: In function ���CSAEaddLayer���: autoencoder.c:1889:9: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ autoencoder.c: In function ���CSAEtrainLayerFromVoxlist���: autoencoder.c:1907:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma, tol, min_rms ; ^ autoencoder.c: In function ���CSAElayerWeightsToMRI���: autoencoder.c:2054:15: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, whalf, whalf_prev, x, y, xk, yk, v, h, count, xp, yp,hp ; ^ mv -f .deps/aseg_edit_svm.Tpo .deps/aseg_edit_svm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT backprop.o -MD -MP -MF .deps/backprop.Tpo -c -o backprop.o backprop.c backprop.c: In function ���BackpropTrainEpoch���: backprop.c:798:32: warning: variable ���error_ratio��� set but not used [-Wunused-but-set-variable] float *inputs, *targets, error_ratio ; ^ backprop.c: In function ���BackpropLearn���: backprop.c:920:11: warning: variable ���bpClass��� set but not used [-Wunused-but-set-variable] int bpClass, i ; ^ mv -f .deps/annotation.Tpo .deps/annotation.Po backprop.c: In function ���BackpropError���: backprop.c:1259:19: warning: variable ���total��� set but not used [-Wunused-but-set-variable] float bpError, total, error ; ^ gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT bfileio.o -MD -MP -MF .deps/bfileio.Tpo -c -o bfileio.o bfileio.c mv -f .deps/afni.Tpo .deps/afni.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT box.o -MD -MP -MF .deps/box.Tpo -c -o box.o box.c mv -f .deps/box.Tpo .deps/box.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT Bruker.o -MD -MP -MF .deps/Bruker.Tpo -c -o Bruker.o Bruker.c Bruker.c: In function ���readBrukerD3proc���: Bruker.c:336:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead; ^ Bruker.c: In function ���readBrukerAcqp���: Bruker.c:534:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead=0; ^ Bruker.c: In function ���readBrukerReco���: Bruker.c:668:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead=0; ^ Bruker.c: In function ���readBrukerVolume���: Bruker.c:800:7: warning: variable ���size��� set but not used [-Wunused-but-set-variable] int size; ^ mv -f .deps/backprop.Tpo .deps/backprop.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT chklc.o -MD -MP -MF .deps/chklc.Tpo -c -o chklc.o chklc.c mv -f .deps/Bruker.Tpo .deps/Bruker.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT chronometer.o -MD -MP -MF .deps/chronometer.Tpo -c -o chronometer.o chronometer.c mv -f .deps/chronometer.Tpo .deps/chronometer.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cluster.o -MD -MP -MF .deps/cluster.Tpo -c -o cluster.o cluster.c mv -f .deps/bfileio.Tpo .deps/bfileio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT class_array.o -MD -MP -MF .deps/class_array.Tpo -c -o class_array.o class_array.c mv -f .deps/chklc.Tpo .deps/chklc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cma.o -MD -MP -MF .deps/cma.Tpo -c -o cma.o cma.c mv -f .deps/cluster.Tpo .deps/cluster.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cmat.o -MD -MP -MF .deps/cmat.Tpo -c -o cmat.o cmat.c mv -f .deps/cmat.Tpo .deps/cmat.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cmdargs.o -MD -MP -MF .deps/cmdargs.Tpo -c -o cmdargs.o cmdargs.c mv -f .deps/cmdargs.Tpo .deps/cmdargs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT colortab.o -MD -MP -MF .deps/colortab.Tpo -c -o colortab.o colortab.c colortab.c: In function ���CTABfindEntryByName���: colortab.c:1862:11: warning: the comparison will always evaluate as ���false��� for the address of ���index��� will never be NULL [-Waddress] if (NULL==index) ^ mv -f .deps/class_array.Tpo .deps/class_array.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT connectcomp.o -MD -MP -MF .deps/connectcomp.Tpo -c -o connectcomp.o connectcomp.c mv -f .deps/autoencoder.Tpo .deps/autoencoder.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT corio.o -MD -MP -MF .deps/corio.Tpo -c -o corio.o corio.c mv -f .deps/corio.Tpo .deps/corio.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT cpputils.o -MD -MP -MF .deps/cpputils.Tpo -c -o cpputils.o cpputils.cpp mv -f .deps/cma.Tpo .deps/cma.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ctrpoints.o -MD -MP -MF .deps/ctrpoints.Tpo -c -o ctrpoints.o ctrpoints.c ctrpoints.c: In function ���MRIreadControlPoints���: ctrpoints.c:46:7: warning: variable ���numpoints��� set but not used [-Wunused-but-set-variable] int numpoints; ^ mv -f .deps/ctrpoints.Tpo .deps/ctrpoints.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT cvector.o -MD -MP -MF .deps/cvector.Tpo -c -o cvector.o cvector.c In file included from ../include/MRISOBBTree.h:57:0, from cpputils.cpp:42: ../include/utilsmath.h: In function ���MRI* Math::MRISbshell(MRI*, MRI_SURFACE*, MRI*, int)���: ../include/utilsmath.h:626:9: warning: variable ���imnr0��� set but not used [-Wunused-but-set-variable] int imnr0; ^ ../include/utilsmath.h:627:12: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:15: warning: variable ���st��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:18: warning: variable ���xx0��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:22: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:26: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:30: warning: variable ���yy1��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:34: warning: variable ���zz0��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ ../include/utilsmath.h:627:38: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] double ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2; ^ mv -f .deps/colortab.Tpo .deps/colortab.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dcdflib.o -MD -MP -MF .deps/dcdflib.Tpo -c -o dcdflib.o dcdflib.c mv -f .deps/connectcomp.Tpo .deps/connectcomp.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dct.o -MD -MP -MF .deps/dct.Tpo -c -o dct.o dct.c dcdflib.c: In function ���E0000���: dcdflib.c:6473:58: warning: variable ���qok��� set but not used [-Wunused-but-set-variable] static unsigned long qbdd,qcond,qdum1,qdum2,qincr,qlim,qok,qup; ^ mv -f .deps/cvector.Tpo .deps/cvector.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT density.o -MD -MP -MF .deps/density.Tpo -c -o density.o density.c mv -f .deps/dct.Tpo .deps/dct.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT diag.o -MD -MP -MF .deps/diag.Tpo -c -o diag.o diag.c diag.c: In function ���DiagDrawBox���: diag.c:220:7: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int i; ^ mv -f .deps/diag.Tpo .deps/diag.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT DICOMRead.o -MD -MP -MF .deps/DICOMRead.Tpo -c -o DICOMRead.o DICOMRead.c mv -f .deps/density.Tpo .deps/density.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT diffuse.o -MD -MP -MF .deps/diffuse.Tpo -c -o diffuse.o diffuse.c DICOMRead.c: In function ���sdcmLoadVolumeAutoScale���: DICOMRead.c:583:15: warning: variable ���nthdir��� set but not used [-Wunused-but-set-variable] int nnlist, nthdir; ^ DICOMRead.c: In function ���sdfiAssignRunNo���: DICOMRead.c:3715:9: warning: variable ���tmpstr��� set but not used [-Wunused-but-set-variable] char *tmpstr; ^ DICOMRead.c: In function ���DICOMRead2���: DICOMRead.c:5919:37: warning: variable ���nvox��� set but not used [-Wunused-but-set-variable] int ndcmfiles, nthfile, mritype=0,nvox,IsDWI,IsPhilipsDWI; ^ DICOMRead.c: In function ���DICOMInfo2MRI���: DICOMRead.c:6915:11: warning: variable ���nvox��� set but not used [-Wunused-but-set-variable] long n, nvox; ^ DICOMRead.c: In function ���DICOMRead���: DICOMRead.c:6996:7: warning: variable ���inputImageNumber��� set but not used [-Wunused-but-set-variable] int inputImageNumber; ^ DICOMRead.c:6987:55: warning: variable ���error��� set but not used [-Wunused-but-set-variable] int i, NumberOfFiles, NumberOfDICOMFiles, nStudies, error; ^ mv -f .deps/diffuse.Tpo .deps/diffuse.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dti.o -MD -MP -MF .deps/dti.Tpo -c -o dti.o dti.c mv -f .deps/cpputils.Tpo .deps/cpputils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dtk.fs.o -MD -MP -MF .deps/dtk.fs.Tpo -c -o dtk.fs.o dtk.fs.c mv -f .deps/dti.Tpo .deps/dti.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT error.o -MD -MP -MF .deps/error.Tpo -c -o error.o error.c mv -f .deps/error.Tpo .deps/error.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT evschutils.o -MD -MP -MF .deps/evschutils.Tpo -c -o evschutils.o evschutils.c evschutils.c: In function ���EVSdesignMtxStats���: evschutils.c:850:21: warning: variable ���nNuisAvgs��� set but not used [-Wunused-but-set-variable] int r,m,nTaskAvgs,nNuisAvgs,nAvgs,Cfree,J; ^ mv -f .deps/dtk.fs.Tpo .deps/dtk.fs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fcd.o -MD -MP -MF .deps/fcd.Tpo -c -o fcd.o fcd.c mv -f .deps/evschutils.Tpo .deps/evschutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fftutils.o -MD -MP -MF .deps/fftutils.Tpo -c -o fftutils.o fftutils.c mv -f .deps/dcdflib.Tpo .deps/dcdflib.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT field_code.o -MD -MP -MF .deps/field_code.Tpo -c -o field_code.o field_code.c mv -f .deps/fcd.Tpo .deps/fcd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT filter.o -MD -MP -MF .deps/filter.Tpo -c -o filter.o filter.c mv -f .deps/field_code.Tpo .deps/field_code.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fio.o -MD -MP -MF .deps/fio.Tpo -c -o fio.o fio.c filter.c: In function ���ImageCorrelateRegion���: filter.c:2448:31: warning: variable ���colend��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:21: warning: variable ���colstart��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:13: warning: variable ���rowend��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:3: warning: variable ���rowstart��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ fio.c: In function ���freadInt���: fio.c:204:11: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int i, nread ; ^ fio.c: In function ���freadLong���: fio.c:215:8: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int nread ; ^ fio.c: In function ���znzreadInt���: fio.c:477:11: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int i, nread ; ^ fio.c: In function ���znzreadLong���: fio.c:489:8: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int nread ; ^ mv -f .deps/fftutils.Tpo .deps/fftutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT flash.o -MD -MP -MF .deps/flash.Tpo -c -o flash.o flash.c mv -f .deps/fio.Tpo .deps/fio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fmarchmesh.o -MD -MP -MF .deps/fmarchmesh.Tpo -c -o fmarchmesh.o fmarchmesh.c flash.c: In function ���compute_T1_PD���: flash.c:166:56: warning: variable ���best_sse��� set but not used [-Wunused-but-set-variable] double best_T1, best_PD, norm_im, norm_pred, sse, best_sse, T1, ^ mv -f .deps/DICOMRead.Tpo .deps/DICOMRead.Po mv -f .deps/flash.Tpo .deps/flash.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fmriutils.o -MD -MP -MF .deps/fmriutils.Tpo -c -o fmriutils.o fmriutils.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fsenv.o -MD -MP -MF .deps/fsenv.Tpo -c -o fsenv.o fsenv.c mv -f .deps/fmarchmesh.Tpo .deps/fmarchmesh.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fsglm.o -MD -MP -MF .deps/fsglm.Tpo -c -o fsglm.o fsglm.c mv -f .deps/fsenv.Tpo .deps/fsenv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fsPrintHelp.o -MD -MP -MF .deps/fsPrintHelp.Tpo -c -o fsPrintHelp.o fsPrintHelp.c mv -f .deps/fsPrintHelp.Tpo .deps/fsPrintHelp.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fsinit.o -MD -MP -MF .deps/fsinit.Tpo -c -o fsinit.o fsinit.c fsinit.c: In function ���FSinit���: fsinit.c:13:9: warning: variable ���cp��� set but not used [-Wunused-but-set-variable] char *cp ; ^ mv -f .deps/fsinit.Tpo .deps/fsinit.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gcaboundary.o -MD -MP -MF .deps/gcaboundary.Tpo -c -o gcaboundary.o gcaboundary.c gcaboundary.c: In function ���GCABgetProbability���: gcaboundary.c:226:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:225:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:225:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:225:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:224:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:224:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:224:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPin���: gcaboundary.c:426:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:425:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:425:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:425:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:424:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:424:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:424:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPout���: gcaboundary.c:626:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:625:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:625:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:625:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:624:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:624:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:624:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPgrad���: gcaboundary.c:826:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:825:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:825:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:825:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:824:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:824:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:824:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABwrite���: gcaboundary.c:1126:9: warning: variable ���where��� set but not used [-Wunused-but-set-variable] long where ; ^ gcaboundary.c: In function ���GCABread���: gcaboundary.c:1217:11: warning: variable ���where��� set but not used [-Wunused-but-set-variable] long where ; ^ gcaboundary.c:1212:75: warning: variable ���nvertices��� set but not used [-Wunused-but-set-variable] int x, y, z, vno, i1, i2, spacing, ico_order, nibins, ngbins, label, nvertices ; ^ gcaboundary.c: In function ���gcabUpdateDistributions���: gcaboundary.c:1297:42: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1297:38: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1297:34: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1295:54: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c:1295:50: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c:1295:46: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c: In function ���gcabUpdateNodeIout���: gcaboundary.c:1406:15: warning: variable ���i2u��� set but not used [-Wunused-but-set-variable] int i2b, i2u ; ^ gcaboundary.c:1405:20: warning: variable ���i2d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i2d, gbinf ; ^ gcaboundary.c: In function ���gcabUpdateNodeIin���: gcaboundary.c:1448:15: warning: variable ���i1u��� set but not used [-Wunused-but-set-variable] int i1b, i1u ; ^ gcaboundary.c:1447:20: warning: variable ���i1d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, gbinf ; ^ gcaboundary.c: In function ���gcabUpdateNode���: gcaboundary.c:1491:37: warning: variable ���gbinu��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1491:25: warning: variable ���i2u��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1491:20: warning: variable ���i1u��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1490:37: warning: variable ���gbind��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c:1490:25: warning: variable ���i2d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c:1490:20: warning: variable ���i1d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c: In function ���gcabSmoothPDF���: gcaboundary.c:1718:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ gcaboundary.c:1718:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ gcaboundary.c:1718:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ mv -f .deps/fsglm.Tpo .deps/fsglm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gca.o -MD -MP -MF .deps/gca.Tpo -c -o gca.o gca.c gca.c: In function ���GCAgetPriorToSourceVoxelMatrix���: gca.c:1698:50: warning: variable ���m_voxsize��� set but not used [-Wunused-but-set-variable] MATRIX *m_prior2voxel, *m_prior2source_voxel, *m_voxsize, *m_tmp ; ^ gca.c: In function ���GCAread���: gca.c:2936:40: warning: variable ���prior_depth��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c:2936:26: warning: variable ���prior_height��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c:2936:13: warning: variable ���prior_width��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c: In function ���GCAcompleteMeanTraining���: gca.c:3824:21: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int r, i ; ^ gca.c: In function ���GCAcompleteCovarianceTraining���: gca.c:3868:25: warning: variable ���holes_filled��� set but not used [-Wunused-but-set-variable] int x, y, z, n, holes_filled, r, c,v, nregs = 0, nsamples ; ^ gca.c: In function ���GCAlabel���: gca.c:4121:21: warning: variable ���max_gc��� set but not used [-Wunused-but-set-variable] GC1D *gc, *max_gc ; ^ gca.c:4117:25: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int y, z, n, label, max_n, xn, yn, zn ; ^ gca.c: In function ���GCAlabelProbabilities���: gca.c:4325:16: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c:4322:15: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int y, z, label, xn, yn, zn, n ; ^ gca.c: In function ���GCAcomputeProbabilities���: gca.c:4483:14: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c: In function ���GCAclassify���: gca.c:4884:14: warning: variable ���max_p��� set but not used [-Wunused-but-set-variable] float max_p, p, total_p ; ^ gca.c:4883:15: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c: In function ���GCAremoveOutlyingSamples���: gca.c:5000:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5000:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5000:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c: In function ���GCAnormalizedLogSampleProbability���: gca.c:5079:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5079:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5079:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c: In function ���GCAcomputeLogSampleProbabilityLongitudinal���: gca.c:5294:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:5294:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:5294:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c: In function ���GCAcomputeLogSampleProbabilityUsingCoords���: gca.c:5406:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c:5406:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c:5406:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c: In function ���GCAtransformSamples���: gca.c:5637:14: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c:5634:20: warning: variable ���min_v��� set but not used [-Wunused-but-set-variable] float max_p, min_v, vscale, min_y, prior ; ^ gca.c: In function ���GCAfindStableSamples���: gca.c:6421:9: warning: variable ���best_mean_dist��� set but not used [-Wunused-but-set-variable] float best_mean_dist; ^ gca.c: In function ���gcaFindBestSample���: gca.c:7428:25: warning: variable ���min_var��� set but not used [-Wunused-but-set-variable] float max_prior, min_var, prior ; ^ gca.c:7425:14: warning: variable ���best_n��� set but not used [-Wunused-but-set-variable] best_n, best_x, best_y, best_z, xn, yn, zn, r, c, v ; ^ gca.c: In function ���GCAtransformAndWriteSampleMeans���: gca.c:7794:14: warning: variable ���gcap��� set but not used [-Wunused-but-set-variable] GCA_PRIOR *gcap ; ^ gca.c: In function ���GCAanneal���: gca.c:8467:50: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, label, val, iter, ^ gca.c: In function ���GCAreclassifyUsingGibbsPriors���: gca.c:8854:16: warning: variable ���val��� set but not used [-Wunused-but-set-variable] float val ; ^ gca.c: In function ���GCAexpandVentricle���: gca.c:10260:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c:10257:46: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c:10257:38: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c:10257:31: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c: In function ���GCAexpandCortex���: gca.c:10672:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAnormalizeSamples���: gca.c:11222:63: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] float wm_means[MAX_GCA_INPUTS], tmp[MAX_GCA_INPUTS], max_wm ; ^ gca.c: In function ���GCAlabelProbability���: gca.c:12250:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCArelabel_cortical_gray_and_white���: gca.c:13835:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���gcaExtractThresholdedRegionLabelAsSamples���: gca.c:14202:33: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c:14202:25: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c:14202:18: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c: In function ���GCAhistoScaleImageIntensities���: gca.c:15973:38: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] scales[MAX_GCA_INPUTS], max_wm/*, scale*/ ; ^ gca.c: In function ���GCAhistoScaleImageIntensitiesLongitudinal���: gca.c:16252:38: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] scales[MAX_GCA_INPUTS], max_wm/*, scale*/ ; ^ gca.c: In function ���GCAfindAllSamples���: gca.c:16957:14: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] max_n, max_label, nsamples, r, c, v ; ^ gca.c:16956:48: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, n, label, i, ^ gca.c: In function ���GCAmapRenormalizeWithHistograms���: gca.c:21035:27: warning: variable ���upper_thresh��� set but not used [-Wunused-but-set-variable] lower_thresh, upper_thresh ; ^ gca.c:21035:13: warning: variable ���lower_thresh��� set but not used [-Wunused-but-set-variable] lower_thresh, upper_thresh ; ^ gca.c: In function ���GCAapplyRenormalization���: gca.c:24034:16: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c:24029:45: warning: variable ���scales��� set but not used [-Wunused-but-set-variable] means_after[MAX_GCA_LABELS], scales[MAX_GCA_LABELS]; ^ gca.c: In function ���GCAmapRenormalize���: gca.c:24446:18: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c: In function ���GCAmapRenormalizeByClass���: gca.c:24949:18: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c:24633:45: warning: variable ���label��� set but not used [-Wunused-but-set-variable] xn, yn, zn, num, frame, bin, n, label, c, max_label ; ^ gca.c: In function ���GCArelabelNonbrain���: gca.c:25076:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAbuildMostLikelyLabelVolume���: gca.c:26637:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAbuildMostLikelyLabelProbabilityVolume���: gca.c:26731:13: warning: variable ���max_label��� set but not used [-Wunused-but-set-variable] int max_label ; ^ gca.c:26727:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAcomputeLabelMeansAndCovariances���: gca.c:26804:12: warning: variable ���var��� set but not used [-Wunused-but-set-variable] double var, dof, total_dof ; ^ gca.c: In function ���GCAlabelWMandWMSAs���: gca.c:26907:67: warning: variable ���m_I��� set but not used [-Wunused-but-set-variable] MATRIX *m_cov_wm, *m_cov_wmsa, *m_inv_cov_wmsa, *m_inv_cov_wm, *m_I, ^ gca.c: In function ���GCAcomputeMeanEntropy���: gca.c:28283:44: warning: variable ���max_c��� set but not used [-Wunused-but-set-variable] int x, y, z, c, xn, yn, zn, num, max_c ; ^ gca.c: In function ���GCAreclassifyUnlikelyVoxels���: gca.c:29349:30: warning: variable ���d_new��� set but not used [-Wunused-but-set-variable] double p, max_p, d_old, d_new ; ^ gca.c:29348:66: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int xp, yp, zp, xn, yn, zn, width, height, depth, label, max_n, n ; ^ gca.c:29346:27: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan_total, *gcan ; ^ gca.c: In function ���GCAreclassifyVoxelsAtOptimalScale���: gca.c:29696:66: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int xp, yp, zp, xn, yn, zn, width, height, depth, label, max_n, n ; ^ gca.c: In function ���GCAsourceVoxelToPriorReal���: gca.c:30165:11: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int retval ; ^ gca.c: In function ���GCAcomputeNumberOfGoodFittingSamples���: gca.c:30370:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:30370:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:30370:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c: In function ���MRIwmsaHalo���: gca.c:31006:16: warning: variable ���nwm��� set but not used [-Wunused-but-set-variable] int h, label, nwm, nwmsa, ngm, x, y, z, wmsa_label, wm_label, gm_label, a, b, changed; ^ mv -f .deps/filter.Tpo .deps/filter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gcamorph.o -MD -MP -MF .deps/gcamorph.Tpo -c -o gcamorph.o gcamorph.c gcamorph.c: In function ���GCAMregister���: gcamorph.c:998:63: warning: variable ���rzmin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c:998:56: warning: variable ���rymin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c:998:49: warning: variable ���rxmin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c: In function ���gcamVolumeChangeTermAtNode���: gcamorph.c:3520:25: warning: variable ���orig_area��� set but not used [-Wunused-but-set-variable] double area, orig_area, del_v_scale, uk, image_val, error ; ^ gcamorph.c:3520:19: warning: variable ���area��� set but not used [-Wunused-but-set-variable] double area, orig_area, del_v_scale, uk, image_val, error ; ^ gcamorph.c: In function ���GCAMregisterLevel���: gcamorph.c:5647:52: warning: variable ���reduced��� set but not used [-Wunused-but-set-variable] max_small, increasing, good_step,reduced, good_step_ever ; ^ gcamorph.c: In function ���gcamLimitGradientMagnitude���: gcamorph.c:7092:18: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] float dt ; ^ gcamorph.c: In function ���gcamSpringTerm���: gcamorph.c:7814:67: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7814:59: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7814:52: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c: In function ���gcamSpringEnergy���: gcamorph.c:7998:67: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7998:59: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7998:52: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c: In function ���GCAMinvert���: gcamorph.c:8612:57: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c:8612:53: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c:8612:49: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c: In function ���gcamFindOptimalTimeStep���: gcamorph.c:9389:32: warning: variable ���bad��� set but not used [-Wunused-but-set-variable] int N, i, Gxs, Gys, Gzs,bad, suppressed=0, prev_neg ; ^ gcamorph.c:9387:50: warning: variable ���pct_change��� set but not used [-Wunused-but-set-variable] a, b, c, max_dt, start_dt, start_rms, pct_change ; ^ gcamorph.c: In function ���gcamMapTerm���: gcamorph.c:10783:20: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan=NULL ; ^ gcamorph.c: In function ���gcamMapEnergy���: gcamorph.c:10933:20: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gcamorph.c: In function ���gcamAreaIntensityEnergy���: gcamorph.c:11974:90: warning: variable ���zmax��� set but not used [-Wunused-but-set-variable] x1, y1, z1, xk, yk, zk, xi, yi, zi, xmax, ymax, zmax; ^ gcamorph.c:11973:42: warning: variable ���debug��� set but not used [-Wunused-but-set-variable] int x, y, z, xn, yn, zn, i, debug = 0, nbrs=0, ^ gcamorph.c:11972:80: warning: variable ���z0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcamorph.c:11972:76: warning: variable ���y0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcamorph.c:11972:72: warning: variable ���x0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcamorph.c: In function ���gcamComputeMostLikelyDirection���: gcamorph.c:15367:54: warning: variable ���max_z��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcamorph.c:15367:47: warning: variable ���max_y��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcamorph.c:15367:40: warning: variable ���max_x��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcamorph.c: In function ���gcamConstrainJacobian���: gcamorph.c:15731:40: warning: variable ���start_rms��� set but not used [-Wunused-but-set-variable] min_jacobian, max_jacobian, start_rms ; ^ gcamorph.c:15730:52: warning: variable ���rms��� set but not used [-Wunused-but-set-variable] double alpha, delta, lower_alpha, upper_alpha, rms, ^ gcamorph.c: In function ���gcamExpansionTerm���: gcamorph.c:16886:13: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double sse, error_0, error_n, dx, dy, dz ; ^ gcamorph.c: In function ���GCAMlogPosterior���: gcamorph.c:18720:28: warning: variable ���best_label��� set but not used [-Wunused-but-set-variable] int xn, yn, zn, n, best_label ; ^ gcamorph.c: In function ���MRIcomputeGaussNewtonStep���: gcamorph.c:19054:33: warning: variable ���m_I��� set but not used [-Wunused-but-set-variable] MATRIX *m_J, *m_J_t, *m_inv, *m_I, *m_tmp = NULL, *v_r, *v_v, *m_tmp2 = NULL, *m_D ; ^ gcamorph.c: In function ���MRIcomputeDistanceTransformStep���: gcamorph.c:20003:30: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c:20003:26: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c:20003:22: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c: In function ���GCAMSreclassifyUsingGibbsPriors���: gcamorph.c:20465:21: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gcamorph.c:20269:50: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, label, val, iter, ^ gcamorph.c: In function ���GCAMcomputeVentricleExpansionGradient���: gcamorph.c:21359:24: warning: variable ���outside_scale��� set but not used [-Wunused-but-set-variable] double val, outside_scale ; ^ gcamorph.c: In function ���GCAMregisterVentricles���: gcamorph.c:21458:103: warning: variable ���l_orig_elastic��� set but not used [-Wunused-but-set-variable] double val, base_sigma, pct_change, rms, last_rms = 0.0, orig_dt, l_orig_smooth, min_dt, l_orig_elastic, l_elastic, tol, ^ mv -f .deps/gcaboundary.Tpo .deps/gcaboundary.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gcarray.o -MD -MP -MF .deps/gcarray.Tpo -c -o gcarray.o gcarray.c gcarray.c: In function ���GCarrayClassify���: gcarray.c:507:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth ; ^ gcarray.c: In function ���GCarrayUpdateMeans���: gcarray.c:886:38: warning: variable ���overlap��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap ; ^ gcarray.c:886:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap ; ^ gcarray.c: In function ���GCarrayUpdateCovariances���: gcarray.c:998:38: warning: variable ���overlap��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap, col, row ; ^ gcarray.c:998:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap, col, row ; ^ gcamorph.c: In function ���GCAMdownsample2���: gcamorph.c:21192:21: warning: iteration 5117u invokes undefined behavior [-Waggressive-loop-optimizations] if (labels[l] > max_count) ^ gcamorph.c:21191:9: note: containing loop for (l = 1 ; l <= MAX_CMA_LABELS ; l++) ^ mv -f .deps/fmriutils.Tpo .deps/fmriutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gclass.o -MD -MP -MF .deps/gclass.Tpo -c -o gclass.o gclass.c mv -f .deps/gcarray.Tpo .deps/gcarray.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gcsa.o -MD -MP -MF .deps/gcsa.Tpo -c -o gcsa.o gcsa.c gcsa.c: In function ���GCSAlabel���: gcsa.c:940:15: warning: variable ���cp��� set but not used [-Wunused-but-set-variable] CP *cp ; ^ gcsa.c: In function ���GCSAreclassifyUsingGibbsPriors���: gcsa.c:1297:15: warning: variable ���gcsan��� set but not used [-Wunused-but-set-variable] GCSA_NODE *gcsan ; ^ mv -f .deps/gclass.Tpo .deps/gclass.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT getdelim.o -MD -MP -MF .deps/getdelim.Tpo -c -o getdelim.o getdelim.c mv -f .deps/getdelim.Tpo .deps/getdelim.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT getline.o -MD -MP -MF .deps/getline.Tpo -c -o getline.o getline.c mv -f .deps/getline.Tpo .deps/getline.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gifti_io.o -MD -MP -MF .deps/gifti_io.Tpo -c -o gifti_io.o gifti_io.c gifti_io.c: In function ���gifti_compare_nvpairs���: gifti_io.c:3094:15: warning: variable ���len��� set but not used [-Wunused-but-set-variable] int c, len, diffs = 0; ^ gifti_io.c: In function ���compare_labeltables���: gifti_io.c:3189:12: warning: variable ���roff��� set but not used [-Wunused-but-set-variable] int c, roff, offset, diffs = 0; ^ gifti_io.c: In function ���gifti_clear_gifti_image���: gifti_io.c:4096:26: warning: argument to ���sizeof��� in ���memset��� call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] memset(gim, 0, sizeof(gim)); ^ mv -f .deps/gcsa.Tpo .deps/gcsa.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gifti_local.o -MD -MP -MF .deps/gifti_local.Tpo -c -o gifti_local.o gifti_local.c gifti_local.c: In function ���mrisReadGIFTIdanum���: gifti_local.c:472:32: warning: argument to ���sizeof��� in ���memset��� call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] memset(ct->entries,0,sizeof(ct->entries)); ^ mv -f .deps/gifti_local.Tpo .deps/gifti_local.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gifti_xml.o -MD -MP -MF .deps/gifti_xml.Tpo -c -o gifti_xml.o gifti_xml.c gifti_xml.c: In function ���decode_b64���: gifti_xml.c:2056:29: warning: variable ���c��� set but not used [-Wunused-but-set-variable] unsigned char a, b, c; ^ gcamorph.c: In function ���GCAMmorphSurf���: gcamorph.c:6741:7: warning: ���My��� may be used uninitialized in this function [-Wmaybe-uninitialized] printf(" Avxyz = (%g,%g,%g), Mvxyz = (%g,%g,%g), \n", ^ gcamorph.c:6741:7: warning: ���Mz��� may be used uninitialized in this function [-Wmaybe-uninitialized] gcamorph.c:6741:7: warning: ���Mx��� may be used uninitialized in this function [-Wmaybe-uninitialized] mv -f .deps/gifti_io.Tpo .deps/gifti_io.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gtm.o -MD -MP -MF .deps/gtm.Tpo -c -o gtm.o gtm.c mv -f .deps/gifti_xml.Tpo .deps/gifti_xml.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gw_ic2562.o -MD -MP -MF .deps/gw_ic2562.Tpo -c -o gw_ic2562.o gw_ic2562.c mv -f .deps/gw_ic2562.Tpo .deps/gw_ic2562.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gw_utils.o -MD -MP -MF .deps/gw_utils.Tpo -c -o gw_utils.o gw_utils.c gw_utils.c: In function ���MRIFromMHTandMRIS���: gw_utils.c:207:7: warning: variable ���fno_usage��� set but not used [-Wunused-but-set-variable] int fno_usage; // ^ gw_utils.c: In function ���nowstr���: gw_utils.c:317:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mv -f .deps/gw_utils.Tpo .deps/gw_utils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT handle.o -MD -MP -MF .deps/handle.Tpo -c -o handle.o handle.c mv -f .deps/handle.Tpo .deps/handle.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT heap.o -MD -MP -MF .deps/heap.Tpo -c -o heap.o heap.c heap.c: In function ���xhInsert���: heap.c:430:17: warning: variable ���a��� set but not used [-Wunused-but-set-variable] XheapElement *a, v; ^ mv -f .deps/heap.Tpo .deps/heap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT hippo.o -MD -MP -MF .deps/hippo.Tpo -c -o hippo.o hippo.c mv -f .deps/hippo.Tpo .deps/hippo.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT histo.o -MD -MP -MF .deps/histo.Tpo -c -o histo.o histo.c histo.c: In function ���HISTOfindHighestPeakInRegion���: histo.c:1089:11: warning: variable ���nbins��� set but not used [-Wunused-but-set-variable] int b, nbins, max_count_bin ; ^ histo.c: In function ���HISTOfindCurrentPeak���: histo.c:1411:13: warning: variable ���bv��� set but not used [-Wunused-but-set-variable] int bv ; ^ histo.c:1445:13: warning: variable ���bv��� set but not used [-Wunused-but-set-variable] int bv ; ^ mv -f .deps/gtm.Tpo .deps/gtm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ic163842.o -MD -MP -MF .deps/ic163842.Tpo -c -o ic163842.o ic163842.c mv -f .deps/ic163842.Tpo .deps/ic163842.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ic2562.o -MD -MP -MF .deps/ic2562.Tpo -c -o ic2562.o ic2562.c mv -f .deps/ic2562.Tpo .deps/ic2562.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ic642.o -MD -MP -MF .deps/ic642.Tpo -c -o ic642.o ic642.c mv -f .deps/ic642.Tpo .deps/ic642.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ic42.o -MD -MP -MF .deps/ic42.Tpo -c -o ic42.o ic42.c mv -f .deps/ic42.Tpo .deps/ic42.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ic12.o -MD -MP -MF .deps/ic12.Tpo -c -o ic12.o ic12.c mv -f .deps/ic12.Tpo .deps/ic12.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT icosahedron.o -MD -MP -MF .deps/icosahedron.Tpo -c -o icosahedron.o icosahedron.c mv -f .deps/icosahedron.Tpo .deps/icosahedron.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT image.o -MD -MP -MF .deps/image.Tpo -c -o image.o image.c image.c: In function ���ImageThreshold���: image.c:202:12: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode ; ^ image.c: In function ���ImageScaleRange���: image.c:1302:43: warning: variable ���dlow��� set but not used [-Wunused-but-set-variable] double *dsrc, dval, dmin, dmax, dnorm, dlow ; ^ image.c: In function ���ImageReflect���: image.c:2030:32: warning: variable ���itmp��� set but not used [-Wunused-but-set-variable] unsigned int *isrc, *idst, *itmp ; ^ image.c:2029:30: warning: variable ���tmp��� set but not used [-Wunused-but-set-variable] unsigned char *src, *dst, *tmp ; ^ mv -f .deps/histo.Tpo .deps/histo.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT imageio.o -MD -MP -MF .deps/imageio.Tpo -c -o imageio.o imageio.c imageio.c: In function ���ImageWrite���: imageio.c:107:9: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode ; ^ imageio.c: In function ���TiffReadImage���: imageio.c:852:26: warning: variable ���extra_samples��� set but not used [-Wunused-but-set-variable] int scanlinesize, extra_samples; ^ imageio.c: In function ���TiffReadHeader���: imageio.c:1243:46: warning: variable ���extra_samples��� set but not used [-Wunused-but-set-variable] int ret, width, height, bits_per_sample, extra_samples ; ^ imageio.c:1243:9: warning: variable ���ret��� set but not used [-Wunused-but-set-variable] int ret, width, height, bits_per_sample, extra_samples ; ^ mv -f .deps/imageio.Tpo .deps/imageio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT imautils.o -MD -MP -MF .deps/imautils.Tpo -c -o imautils.o imautils.c mv -f .deps/imautils.Tpo .deps/imautils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT intensity_eig.o -MD -MP -MF .deps/intensity_eig.Tpo -c -o intensity_eig.o intensity_eig.c mv -f .deps/intensity_eig.Tpo .deps/intensity_eig.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT inverse.o -MD -MP -MF .deps/inverse.Tpo -c -o inverse.o inverse.c mv -f .deps/inverse.Tpo .deps/inverse.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ipmpar.o -MD -MP -MF .deps/ipmpar.Tpo -c -o ipmpar.o ipmpar.c mv -f .deps/ipmpar.Tpo .deps/ipmpar.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT kernel.o -MD -MP -MF .deps/kernel.Tpo -c -o kernel.o kernel.c mv -f .deps/kernel.Tpo .deps/kernel.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT kinput.o -MD -MP -MF .deps/kinput.Tpo -c -o kinput.o kinput.c mv -f .deps/kinput.Tpo .deps/kinput.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT label.o -MD -MP -MF .deps/label.Tpo -c -o label.o label.c mv -f .deps/image.Tpo .deps/image.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT lpafile.o -MD -MP -MF .deps/lpafile.Tpo -c -o lpafile.o lpafile.c lpafile.c: In function ���LPAFresetImageAnswer���: lpafile.c:152:11: warning: variable ���lpb��� set but not used [-Wunused-but-set-variable] LP_BOX *lpb ; ^ mv -f .deps/lpafile.Tpo .deps/lpafile.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT machine.o -MD -MP -MF .deps/machine.Tpo -c -o machine.o machine.c mv -f .deps/machine.Tpo .deps/machine.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT MARS_DT_Boundary.o -MD -MP -MF .deps/MARS_DT_Boundary.Tpo -c -o MARS_DT_Boundary.o MARS_DT_Boundary.c mv -f .deps/MARS_DT_Boundary.Tpo .deps/MARS_DT_Boundary.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT matfile.o -MD -MP -MF .deps/matfile.Tpo -c -o matfile.o matfile.c matfile.c: In function ���MatlabRead���: matfile.c:88:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col ; ^ matfile.c: In function ���MatFileRead���: matfile.c:174:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col ; ^ matfile.c:171:13: warning: variable ���name��� set but not used [-Wunused-but-set-variable] char *name ; ^ matfile.c: In function ���ReadMatlabFileContents���: matfile.c:654:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col, len ; ^ matfile.c: In function ���MatlabRead2���: matfile.c:887:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col; ^ mv -f .deps/gcamorph.Tpo .deps/gcamorph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT matrix.o -MD -MP -MF .deps/matrix.Tpo -c -o matrix.o matrix.c matrix.c: In function ���MatrixInverse���: matrix.c:115:17: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float **a, **y; ^ matrix.c:115:12: warning: variable ���a��� set but not used [-Wunused-but-set-variable] float **a, **y; ^ matrix.c: In function ���MatrixClear���: matrix.c:1159:10: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int rows, row, cols ; ^ mv -f .deps/matfile.Tpo .deps/matfile.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mgh_filter.o -MD -MP -MF .deps/mgh_filter.Tpo -c -o mgh_filter.o mgh_filter.c mgh_filter.c: In function ���bandpass���: mgh_filter.c:117:9: warning: variable ���norm��� set but not used [-Wunused-but-set-variable] float norm,f,fl,fh,w,wh,wl; ^ mv -f .deps/mgh_filter.Tpo .deps/mgh_filter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mgh_matrix.o -MD -MP -MF .deps/mgh_matrix.Tpo -c -o mgh_matrix.o mgh_matrix.c mv -f .deps/label.Tpo .deps/label.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT min_heap.o -MD -MP -MF .deps/min_heap.Tpo -c -o min_heap.o min_heap.c mv -f .deps/min_heap.Tpo .deps/min_heap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mincutils.o -MD -MP -MF .deps/mincutils.Tpo -c -o mincutils.o mincutils.c mv -f .deps/mincutils.Tpo .deps/mincutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT minmaxrc.o -MD -MP -MF .deps/minmaxrc.Tpo -c -o minmaxrc.o minmaxrc.c mv -f .deps/mgh_matrix.Tpo .deps/mgh_matrix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT morph.o -MD -MP -MF .deps/morph.Tpo -c -o morph.o morph.c mv -f .deps/minmaxrc.Tpo .deps/minmaxrc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mosaic.o -MD -MP -MF .deps/mosaic.Tpo -c -o mosaic.o mosaic.c morph.c: In function ���ImageDilate���: morph.c:666:10: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode, center_row, center_col ; ^ morph.c: In function ���ImageErode���: morph.c:733:10: warning: variable ���tmp��� set but not used [-Wunused-but-set-variable] IMAGE *tmp; ^ morph.c:732:7: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int i=which; /* prevents warning */ ^ morph.c: In function ���morphFilter���: morph.c:911:51: warning: variable ���endpix��� set but not used [-Wunused-but-set-variable] row_start, row_end, col_start, col_end, *dpix, *endpix ; ^ morph.c:910:40: warning: variable ���row_pix��� set but not used [-Wunused-but-set-variable] int rows, cols, row, col, row_pix, ^ morph.c: In function ���morphApplyLut���: morph.c:956:35: warning: variable ���endpix��� set but not used [-Wunused-but-set-variable] register unsigned char *dpix, *endpix ; ^ mosaic.c: In function ���VolSS2MosSS���: mosaic.c:89:15: warning: variable ���nrtmos��� set but not used [-Wunused-but-set-variable] int nctmos, nrtmos; ^ mosaic.c: In function ���MosSS2VolSS���: mosaic.c:146:15: warning: variable ���nrtmos��� set but not used [-Wunused-but-set-variable] int nctmos, nrtmos; ^ mv -f .deps/mosaic.Tpo .deps/mosaic.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri2.o -MD -MP -MF .deps/mri2.Tpo -c -o mri2.o mri2.c mv -f .deps/morph.Tpo .deps/morph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri.o -MD -MP -MF .deps/mri.Tpo -c -o mri.o mri.c mri2.c: In function ���mri_rescale���: mri2.c:267:30: warning: variable ���volrange��� set but not used [-Wunused-but-set-variable] float val, volmin, volmax, volrange, range; ^ mri2.c: In function ���MRIannot2CorticalSeg���: mri2.c:4756:58: warning: variable ���wmval��� set but not used [-Wunused-but-set-variable] int r,s,asegv,annot,annotid,vtxno,wvtxno,pvtxno,segv,wmval; ^ mri.c: In function ���MRIrmsDifferenceNonzero���: mri.c:1510:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, frame, nvox ; ^ mri.c: In function ���MRIrotateX���: mri.c:7053:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7053:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7053:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateY���: mri.c:7092:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7092:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7092:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateZ���: mri.c:7132:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7132:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7132:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateX_I���: mri.c:7169:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7169:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7169:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateY_I���: mri.c:7202:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7202:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7202:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateZ_I���: mri.c:7235:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7235:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7235:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���ImageToMRI���: mri.c:8013:21: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8013:18: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8013:15: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:23: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:20: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:17: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8032:17: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int val ; ^ mri.c: In function ���MRIextractTalairachPlane���: mri.c:9274:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, x0, y0, z0 ; ^ mri.c: In function ���MRIeraseTalairachPlaneNew���: mri.c:9439:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, xt0, yt0, zt0 ; ^ mri.c: In function ���MRIeraseTalairachPlane���: mri.c:9550:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len ; ^ mri.c: In function ���MRIfillPlane���: mri.c:9720:28: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height ; ^ mri.c:9720:21: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height ; ^ mri.c: In function ���MRIinterpolate���: mri.c:9842:18: warning: variable ���outval��� set but not used [-Wunused-but-set-variable] float vals[8], outval ; ^ mri.c: In function ���MRItrilinKernel���: mri.c:10895:30: warning: variable ���zp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c:10895:22: warning: variable ���yp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c:10895:14: warning: variable ���xp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c: In function ���MRIsincSampleVolume���: mri.c:11276:22: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11276:16: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11276:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c: In function ���MRIsincSampleVolumeFrame���: mri.c:11408:22: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11408:16: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11408:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c: In function ���MRIsampleVolumeGradient���: mri.c:11878:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11878:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11878:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIsampleVolumeGradientFrame���: mri.c:11945:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11945:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11945:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mv -f .deps/matrix.Tpo .deps/matrix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriBSpline.o -MD -MP -MF .deps/mriBSpline.Tpo -c -o mriBSpline.o mriBSpline.c mv -f .deps/mri2.Tpo .deps/mri2.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriclass.o -MD -MP -MF .deps/mriclass.Tpo -c -o mriclass.o mriclass.c mriclass.c: In function ���MRICclassify���: mriclass.c:492:37: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c:492:30: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c:492:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c: In function ���MRICupdateStatistics���: mriclass.c:1254:31: warning: variable ���src��� set but not used [-Wunused-but-set-variable] BUFTYPE *psrc, *ptarget, src ; ^ mriclass.c:1252:57: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:49: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:42: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:32: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c: In function ���MRICbuildScatterPlot���: mriclass.c:1938:59: warning: variable ���bin_offset��� set but not used [-Wunused-but-set-variable] int obs_no = 0, i, x, y, nbins, half_bins, bin_offset ; ^ mv -f .deps/mriBSpline.Tpo .deps/mriBSpline.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_conform.o -MD -MP -MF .deps/mri_conform.Tpo -c -o mri_conform.o mri_conform.c mri_conform.c: In function ���MRIconform���: mri_conform.c:86:7: warning: variable ���KeepDC��� set but not used [-Wunused-but-set-variable] int KeepDC; ^ mri_conform.c:85:10: warning: variable ���conform_size��� set but not used [-Wunused-but-set-variable] double conform_size; ^ mri_conform.c:84:7: warning: variable ���conform_width��� set but not used [-Wunused-but-set-variable] int conform_width; ^ mv -f .deps/mri_conform.Tpo .deps/mri_conform.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mricurv.o -MD -MP -MF .deps/mricurv.Tpo -c -o mricurv.o mricurv.c mriclass.c:1997:13: warning: ���z[1]��� may be used uninitialized in this function [-Wmaybe-uninitialized] y = z[1]*(nbins-1)+1 ; ^ mriclass.c:1996:13: warning: ���z[0]��� may be used uninitialized in this function [-Wmaybe-uninitialized] x = z[0]*(nbins-1)+1 ; ^ mv -f .deps/mriclass.Tpo .deps/mriclass.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriflood.o -MD -MP -MF .deps/mriflood.Tpo -c -o mriflood.o mriflood.c mriflood.c: In function ���MRISshell���: mriflood.c:199:35: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:31: warning: variable ���zz0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:27: warning: variable ���yy1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:23: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:19: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:15: warning: variable ���xx0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:12: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:9: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:198:7: warning: variable ���imnr0��� set but not used [-Wunused-but-set-variable] int imnr0; ^ mriflood.c: In function ���MRISpartialshell���: mriflood.c:632:35: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:31: warning: variable ���zz0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:27: warning: variable ���yy1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:23: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:19: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:15: warning: variable ���xx0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:12: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:9: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:631:7: warning: variable ���imnr0��� set but not used [-Wunused-but-set-variable] int imnr0; ^ mriflood.c: In function ���MRIbitwiseor���: mriflood.c:746:20: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:746:16: warning: variable ���p2��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:746:12: warning: variable ���p1��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c: In function ���MRIbitwiseand���: mriflood.c:776:20: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:776:16: warning: variable ���p2��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:776:12: warning: variable ���p1��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mv -f .deps/mricurv.Tpo .deps/mricurv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriFunctionalDataAccess.o -MD -MP -MF .deps/mriFunctionalDataAccess.Tpo -c -o mriFunctionalDataAccess.o mriFunctionalDataAccess.c In file included from ../include/mriTransform.h:35:0, from ../include/mriFunctionalDataAccess.h:31, from mriFunctionalDataAccess.c:34: mriFunctionalDataAccess.c: In function ���FunD_New���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:210:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Delete���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:280:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ReshapeIfScalar_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:355:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_FindAndParseStemHeader_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:554:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GuessMetaInformation_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:588:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ParseRegistrationAndInitMatricies_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:784:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_RestoreRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:811:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetClientCoordBounds���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:862:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetConversionMethod���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:892:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:922:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:951:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ClientSpaceIsTkRegRAS���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:989:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_IsScalar���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1025:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetData���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1108:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSampledData���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1187:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDataForAllTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1251:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDeviation���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1325:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDeviationForAllTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1399:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Smooth���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1442:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_NormalizeOverAll���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1472:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ConvertTimePointToSecond���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1511:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ConvertSecondToTimePoint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1542:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetTimeResolution���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1572:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetNumPreStimTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1602:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSubjectName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1632:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1662:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumConditions���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1692:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetTimeResolution���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1723:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumPreStimTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1754:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetValueRange���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1786:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_IsErrorDataPresent���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1816:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetBoundsInClientSpace���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1884:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetValueAtPercentile���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1952:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_CalcFDRThreshold���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2106:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SaveRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2246:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetRegistrationToIdentity���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2279:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ApplyTransformToRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2324:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_TranslateRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2365:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_RotateRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2426:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ScaleRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2462:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_DebugPrint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2507:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ResampleData_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2615:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_CalcFrequencies_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2695:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Verify���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3138:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_VerifyTimePoint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3186:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_VerifyCondition���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3210:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mv -f .deps/mriflood.Tpo .deps/mriflood.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriHeadPointList.o -MD -MP -MF .deps/mriHeadPointList.Tpo -c -o mriHeadPointList.o mriHeadPointList.c In file included from ../include/mriTransform.h:35:0, from ../include/mriHeadPointList.h:30, from mriHeadPointList.c:28: mriHeadPointList.c: In function ���HPtL_New���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:132:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mriHeadPointList.c: In function ���HPtL_CreateTransform_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:447:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mriHeadPointList.c: In function ���HPtL_ConvertListToClientSpace_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:527:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mv -f .deps/mriHeadPointList.Tpo .deps/mriHeadPointList.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrihisto.o -MD -MP -MF .deps/mrihisto.Tpo -c -o mrihisto.o mrihisto.c mrihisto.c: In function ���MRIhistogramRegion���: mrihisto.c:121:27: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] BUFTYPE bmin, bmax ; ^ mrihisto.c:121:21: warning: variable ���bmin��� set but not used [-Wunused-but-set-variable] BUFTYPE bmin, bmax ; ^ mrihisto.c: In function ���mriHistogramLabel���: mrihisto.c:243:29: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c:243:21: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c:243:14: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c: In function ���mriHistogramRegion���: mrihisto.c:356:32: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] BUFTYPE val, *psrc, bmin, bmax ; ^ mrihisto.c:356:26: warning: variable ���bmin��� set but not used [-Wunused-but-set-variable] BUFTYPE val, *psrc, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistogramLabelRegion���: mrihisto.c:848:25: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] int val, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistogramLabel���: mrihisto.c:923:25: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] int val, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistoSegment���: mrihisto.c:1029:31: warning: variable ���thresh��� set but not used [-Wunused-but-set-variable] valley, wm_peak, gray_peak, thresh, nlabeled ; ^ mrihisto.c: In function ���MRIhistoSegmentVoxel���: mrihisto.c:1203:57: warning: variable ���thresh��� set but not used [-Wunused-but-set-variable] int whalf, in_val, valley, wm_peak, gray_peak, thresh/*, npeaks, ^ mv -f .deps/mriFunctionalDataAccess.Tpo .deps/mriFunctionalDataAccess.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_identify.o -MD -MP -MF .deps/mri_identify.Tpo -c -o mri_identify.o mri_identify.c mri_identify.c: In function ���is_mgh���: mri_identify.c:868:53: warning: variable ���dof��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mri_identify.c:868:47: warning: variable ���type��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mri_identify.c:868:7: warning: variable ���version��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mv -f .deps/gca.Tpo .deps/gca.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT MRIio_old.o -MD -MP -MF .deps/MRIio_old.Tpo -c -o MRIio_old.o MRIio_old.c mv -f .deps/MRIio_old.Tpo .deps/MRIio_old.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriio.o -MD -MP -MF .deps/mriio.Tpo -c -o mriio.o mriio.c mriio.c: In function ���MRIfindRightSize���: mriio.c:403:24: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c:403:17: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c:403:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c: In function ���analyzeRead���: mriio.c:6284:21: warning: variable ���signZ��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mriio.c:6284:14: warning: variable ���signY��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mriio.c:6284:7: warning: variable ���signX��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mv -f .deps/mri_identify.Tpo .deps/mri_identify.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_level_set.o -MD -MP -MF .deps/mri_level_set.Tpo -c -o mri_level_set.o mri_level_set.c mriio.c: In function ���list_labels_in_otl_file���: mriio.c:8830:7: warning: variable ���empty_label_flag��� set but not used [-Wunused-but-set-variable] int empty_label_flag; ^ mriio.c: In function ���MRISreadCurvAsMRI���: mriio.c:9630:23: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int magno,k,vnum,fnum, vals_per_vertex ; ^ mv -f .deps/mrihisto.Tpo .deps/mrihisto.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrifilter.o -MD -MP -MF .deps/mrifilter.Tpo -c -o mrifilter.o mrifilter.c mrifilter.c: In function ���MRImeanInMask���: mrifilter.c:2166:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed; ^ mrifilter.c: In function ���MRImean���: mrifilter.c:2334:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed; ^ mrifilter.c: In function ���MRIconvolveGaussian���: mrifilter.c:2979:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen; ^ mrifilter.c:2979:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen; ^ mrifilter.c:2979:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen; ^ mrifilter.c: In function ���MRIreduce2D���: mrifilter.c:3403:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mrifilter.c: In function ���MRInxcorrWindow���: mrifilter.c:4815:23: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] float dst, norm, *pdst ; ^ mrifilter.c: In function ���MRIborderClassifyVoxel���: mrifilter.c:5394:27: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c:5394:19: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c:5394:12: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c: In function ���MRIclassifyAmbiguous���: mrifilter.c:5634:13: warning: variable ���psrc��� set but not used [-Wunused-but-set-variable] BUFTYPE *psrc, *plabeled, *pdst, label, new_label ; ^ mv -f .deps/mri_level_set.Tpo .deps/mri_level_set.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrimorph.o -MD -MP -MF .deps/mrimorph.Tpo -c -o mrimorph.o mrimorph.c mrimorph.c: In function ���MRIinitScaling���: mrimorph.c:1128:35: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c:1128:31: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c:1128:27: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c: In function ���writeSnapshot���: mrimorph.c:1664:13: warning: variable ���transform��� set but not used [-Wunused-but-set-variable] TRANSFORM transform ; ^ mrimorph.c: In function ���ltaGradientStep���: mrimorph.c:1731:19: warning: variable ���m_L��� set but not used [-Wunused-but-set-variable] MATRIX *m_tmp, *m_L, *m_dT_X_T ; ^ mrimorph.c:1730:23: warning: variable ���v_Yk��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_Yk ; /* original and transformed coordinate systems */ ^ mrimorph.c: In function ���m3dDistanceSSE���: mrimorph.c:2202:44: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] double dist, xd, yd, zd, delta, sse, node_spacing ; ^ mrimorph.c: In function ���m3dNonlinearAreaSSE���: mrimorph.c:2291:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c:2289:26: warning: variable ���n3��� set but not used [-Wunused-but-set-variable] double sse, delta, n3, ratio, exponent ; ^ mrimorph.c: In function ���m3dAreaSSE���: mrimorph.c:2354:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRI3Dmorph���: mrimorph.c:2690:20: warning: variable ���base_intensity��� set but not used [-Wunused-but-set-variable] double dt, base_intensity, base_sigma, sigma, base_tol, max_thick ; ^ mrimorph.c:2690:16: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, base_intensity, base_sigma, sigma, base_tol, max_thick ; ^ mrimorph.c:2686:40: warning: variable ���navgs��� set but not used [-Wunused-but-set-variable] int nlevels, i, max_levels, navgs, base_avgs ; ^ mrimorph.c: In function ���m3dAreaTerm���: mrimorph.c:3656:25: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] float delta, node_spacing, n3 /*, odx, ody, odz*/ ; ^ mrimorph.c:3655:36: warning: variable ���mnpk��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c:3655:30: warning: variable ���mnpj��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c:3655:24: warning: variable ���mnpi��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c: In function ���m3dNonlinearAreaTerm���: mrimorph.c:3914:45: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] float delta, delta_scale, ratio, node_spacing, n3 ; ^ mrimorph.c: In function ���m3dInitDistances���: mrimorph.c:4351:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���m3dscaleDeltaT���: mrimorph.c:4931:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRI3DreadSmall���: mrimorph.c:5085:53: warning: variable ���version��� set but not used [-Wunused-but-set-variable] int i, j, k, width, height, depth, magic, version ; ^ mrimorph.c: In function ���m3dblurGradient���: mrimorph.c:5788:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRISshrinkWrapSkull���: mrimorph.c:6058:42: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float radius, max_radius, scale, x0, y0, z0, sx, sy, sz, thick; ^ mrimorph.c: In function ���m3dNodeAverageExpansion���: mrimorph.c:6433:33: warning: variable ���xgrad��� set but not used [-Wunused-but-set-variable] double dx, dy, dz, dist, xgrad, ygrad, zgrad, avg_expansion ; ^ mrimorph.c: In function ���m3dCompressionSSE���: mrimorph.c:6520:44: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] double dist, xd, yd, zd, delta, sse, node_spacing, expansion ; ^ mrimorph.c: In function ���MRIeraseNeck���: mrimorph.c:6648:17: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c:6648:13: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c:6648:9: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c: In function ���m3dblurDx���: mrimorph.c:6783:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���m3dMorphSkull���: mrimorph.c:6978:48: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c:6978:44: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c:6978:40: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c: In function ���computeRigidAlignmentGradient���: mrimorph.c:7597:23: warning: variable ���v_Yk��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_Yk ; /* original and transformed coordinate systems */ ^ mrimorph.c: In function ���computeEMAlignmentGradient���: mrimorph.c:7960:17: warning: variable ���v_Y��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_means, *v_X_T ; /* original and transformed coordinate systems */ ^ mrimorph.c:7959:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c:7959:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c:7959:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c: In function ���computeEMAlignmentErrorFunctional���: mrimorph.c:8108:12: warning: variable ���mri_inputs��� set but not used [-Wunused-but-set-variable] MRI *mri_inputs ; ^ mrimorph.c: In function ���powell_minimize���: mrimorph.c:8736:47: warning: variable ���min_sse��� set but not used [-Wunused-but-set-variable] float *p, **xi, fret, fstart, scale_factor, min_sse; ^ mrimorph.c: In function ���mriQuasiNewtonEMAlignPyramidLevel���: mrimorph.c:8947:35: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int row, col, i, iter, steps, retval ; ^ mrimorph.c: In function ���compute_label_likelihood���: mrimorph.c:9357:20: warning: variable ���hdepth��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mrimorph.c:9357:11: warning: variable ���hheight��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mrimorph.c:9357:3: warning: variable ���hwidth��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mv -f .deps/mriio.Tpo .deps/mriio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrinorm.o -MD -MP -MF .deps/mrinorm.Tpo -c -o mrinorm.o mrinorm.c mrinorm.c: In function ���MRIbuildBiasImage���: mrinorm.c:1937:26: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c:1937:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c:1937:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramShort���: mrinorm.c:2299:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramFloat���: mrinorm.c:2481:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramUchar���: mrinorm.c:2663:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���find_tissue_intensities���: mrinorm.c:4720:58: warning: variable ���wm_valley��� set but not used [-Wunused-but-set-variable] int csf_peak, thresh_bin /*, bg_end*/, wm_peak, wm_valley; ^ mrinorm.c: In function ���MRInormalizeHighSignalLowStd���: mrinorm.c:4958:12: warning: variable ���nctrl��� set but not used [-Wunused-but-set-variable] int nctrl, x, y, z, width, depth, height ; ^ mv -f .deps/mrimorph.Tpo .deps/mrimorph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mripolv.o -MD -MP -MF .deps/mripolv.Tpo -c -o mripolv.o mripolv.c mv -f .deps/mrifilter.Tpo .deps/mrifilter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriprob.o -MD -MP -MF .deps/mriprob.Tpo -c -o mriprob.o mriprob.c mripolv.c: In function ���MRIcountPlanarAboveThreshold���: mripolv.c:883:28: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int whalf, xk, yk, n,xi,yi,zi, ^ mripolv.c: In function ���MRIplaneOfLeastVarianceNormal���: mripolv.c:942:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi ; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormal���: mripolv.c:1055:19: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE *pdst, max_val ; ^ mripolv.c:1053:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val, ^ mripolv.c:1052:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi, xi, yi, zi, *pxi, *pyi, *pzi, x1, y1, z1, x0, y0,z0; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormalMarked���: mripolv.c:1232:19: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE *pdst, max_val, *pmask ; ^ mripolv.c:1230:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val; ^ mripolv.c:1229:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi, xi, yi, zi, *pxi, *pyi, *pzi, x1, y1, z1, x0, y0,z0; ^ mripolv.c: In function ���MRIfindThinWMStrands���: mripolv.c:1517:54: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, yk, n, vertex,xi,yi,zi, ^ mripolv.c:1517:43: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, yk, n, vertex,xi,yi,zi, ^ mripolv.c: In function ���MRIresegmentThinWMStrands���: mripolv.c:1602:31: warning: variable ���max_dist��� set but not used [-Wunused-but-set-variable] double val, xf, yf, zf, max_dist, up_dist, down_dist ; ^ mripolv.c: In function ���MRIthickenThinWMStrands���: mripolv.c:1986:18: warning: variable ���mseg��� set but not used [-Wunused-but-set-variable] MRI_SEGMENT *mseg ; ^ mripolv.c:2010:18: warning: variable ���mseg��� set but not used [-Wunused-but-set-variable] MRI_SEGMENT *mseg ; ^ mripolv.c:1866:31: warning: variable ���max_dist��� set but not used [-Wunused-but-set-variable] double val, xf, yf, zf, max_dist, up_dist, down_dist /*, xt, yt, zt*/ ; ^ mripolv.c: In function ���MRIpolvCount���: mripolv.c:2308:58: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, xk, yk, n, vertex,xi,yi,zi, ^ mripolv.c: In function ���MRIwmfilterMarked���: mripolv.c:2736:43: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, vertex, num_on, ^ mripolv.c: In function ���MRIneighborhoodPlanarDirection���: mripolv.c:3804:58: warning: variable ���max_count��� set but not used [-Wunused-but-set-variable] x0, x1, y0, y1, z0, z1, x, y, z, num_white, num_black, max_count ; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormalVoxel���: mripolv.c:4384:12: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE max_val ; ^ mripolv.c:4383:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val; ^ mripolv.c:4382:15: warning: variable ���max_vertex��� set but not used [-Wunused-but-set-variable] min_vertex, max_vertex, xi, yi, zi, *pxi, *pyi, *pzi; ^ mripolv.c:4381:27: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c:4381:19: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c:4381:12: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c: In function ���MRIcpolvMedianCurveVoxel���: mripolv.c:4543:3: warning: variable ���min_val_dist��� set but not used [-Wunused-but-set-variable] min_val_dist ; ^ mripolv.c: In function ���MRIremoveIslands���: mripolv.c:4801:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed ; ^ mv -f .deps/mriprob.Tpo .deps/mriprob.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrisbiorthogonalwavelets.o -MD -MP -MF .deps/mrisbiorthogonalwavelets.Tpo -c -o mrisbiorthogonalwavelets.o mrisbiorthogonalwavelets.c mv -f .deps/mri.Tpo .deps/mri.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrisegment.o -MD -MP -MF .deps/mrisegment.Tpo -c -o mrisegment.o mrisegment.c mrisegment.c: In function ���MRImaxSegmentArea���: mrisegment.c:81:7: warning: variable ���max��� set but not used [-Wunused-but-set-variable] int max=-1; ^ mv -f .deps/mrisbiorthogonalwavelets.Tpo .deps/mrisbiorthogonalwavelets.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriset.o -MD -MP -MF .deps/mriset.Tpo -c -o mriset.o mriset.c mriset.c: In function ���MRImeanMask���: mriset.c:2624:12: warning: variable ���pmask��� set but not used [-Wunused-but-set-variable] BUFTYPE *pmask ; ^ mriset.c: In function ���MRIdivideAseg���: mriset.c:4058:49: warning: variable ���mx��� set but not used [-Wunused-but-set-variable] float evalues[3], dx, dy, dz, e1x, e1y, e1z, mx ; ^ mv -f .deps/mrisegment.Tpo .deps/mrisegment.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrishash.o -MD -MP -MF .deps/mrishash.Tpo -c -o mrishash.o mrishash.c mrishash.c: In function ���MHTfindClosestVertex���: mrishash.c:2047:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestFaceToVertex���: mrishash.c:2076:9: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestVertexSet���: mrishash.c:2127:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestVertexInTable���: mrishash.c:2230:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt, i; ^ mv -f .deps/mrinorm.Tpo .deps/mrinorm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrisp.o -MD -MP -MF .deps/mrisp.Tpo -c -o mrisp.o mrisp.c mrisp.c: In function ���MRIStoParameterization���: mrisp.c:398:17: warning: variable ���fp��� set but not used [-Wunused-but-set-variable] **distances, *fp ; ^ mrisp.c: In function ���MRISfromParameterization���: mrisp.c:941:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c:941:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c: In function ���MRIScoordsFromParameterization���: mrisp.c:1038:31: warning: variable ���val4��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:25: warning: variable ���val3��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:19: warning: variable ���val2��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:13: warning: variable ���val1��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1037:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, origx, origy, ^ mrisp.c:1037:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, origx, origy, ^ mrisp.c: In function ���MRISnormalizeFromParameterization���: mrisp.c:1175:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d, var ; ^ mrisp.c:1175:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d, var ; ^ mrisp.c: In function ���MRISgradientToParameterization���: mrisp.c:1269:23: warning: variable ���two_sigma_sq��� set but not used [-Wunused-but-set-variable] **distances, sigma, two_sigma_sq ; ^ mrisp.c: In function ���MRISgradientFromParameterization���: mrisp.c:1466:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, d ; ^ mrisp.c:1466:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, d ; ^ mrisp.c: In function ���MRISPconvolveGaussian���: mrisp.c:1712:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mrisp.c: In function ���MRISPblur���: mrisp.c:1892:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mrisp.c: In function ���MRISPcombine���: mrisp.c:2161:17: warning: variable ���nframes��� set but not used [-Wunused-but-set-variable] int u, v, nframes ; ^ mrisp.c: In function ���MRISPorLabel���: mrisp.c:2295:14: warning: variable ���vno��� set but not used [-Wunused-but-set-variable] int n, vno, u, v ; ^ mrisp.c: In function ���MRISPandLabel���: mrisp.c:2330:14: warning: variable ���vno��� set but not used [-Wunused-but-set-variable] int n, vno, u, v ; ^ mrisp.c: In function ���MRISPaccumulate���: mrisp.c:2425:17: warning: variable ���nframes��� set but not used [-Wunused-but-set-variable] int u, v, nframes ; ^ mrisp.c: In function ���MRISfromParameterizations���: mrisp.c:2572:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c:2572:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c: In function ���MRISPblurFrames���: mrisp.c:2886:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mv -f .deps/mripolv.Tpo .deps/mripolv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriSurface.o -MD -MP -MF .deps/mriSurface.Tpo -c -o mriSurface.o mriSurface.c In file included from ../include/mriTransform.h:35:0, from ../include/mriSurface.h:30, from mriSurface.c:25: mriSurface.c: In function ���Surf_CopyGeometryInformation���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Surf_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriSurface.c:801:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Surf_tErr_NoErr, Surf_GetErrorString ); ^ mriSurface.c: In function ���Surf_TransformToVolumeGeometry���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Surf_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriSurface.c:863:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Surf_tErr_NoErr, Surf_GetErrorString ); ^ mv -f .deps/mrishash.Tpo .deps/mrishash.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrisurf.o -MD -MP -MF .deps/mrisurf.Tpo -c -o mrisurf.o mrisurf.c mv -f .deps/mriSurface.Tpo .deps/mriSurface.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrisutils.o -MD -MP -MF .deps/mrisutils.Tpo -c -o mrisutils.o mrisutils.c mrisurf.c: In function ���MRISremoveRipped���: mrisurf.c:3539:16: warning: variable ���vn��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn ; ^ mrisutils.c: In function ���mrisRmsValError���: mrisutils.c:590:27: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisutils.c:590:23: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisutils.c:590:19: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c: In function ���MRISreadFloatFile���: mrisurf.c:5060:19: warning: variable ���fmax��� set but not used [-Wunused-but-set-variable] float f, fmin, fmax; ^ mrisurf.c:5060:13: warning: variable ���fmin��� set but not used [-Wunused-but-set-variable] float f, fmin, fmax; ^ mrisutils.c: In function ���MRISmatchSurfaceToLabel���: mrisutils.c:1167:47: warning: variable ���delta_t��� set but not used [-Wunused-but-set-variable] double sse,last_sse,rms,last_rms,base_dt,dt,delta_t=0.0; ^ mrisurf.c: In function ���MRISregister���: mrisurf.c:6512:23: warning: variable ���done��� set but not used [-Wunused-but-set-variable] int i, start_t, done, sno, ino, msec, min_averages=0, ^ mrisutils.c: In function ���MRISfindPath���: mrisurf.c: In function ���MRISvectorRegister���: mrisutils.c:2256:21: warning: variable ���vu_z��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisurf.c:7114:7: warning: variable ���pdone��� set but not used [-Wunused-but-set-variable] int pdone = 1 ; ^ mrisutils.c:2256:15: warning: variable ���vu_y��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisutils.c:2256:9: warning: variable ���vu_x��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisurf.c:7104:24: warning: variable ���done��� set but not used [-Wunused-but-set-variable] int i,/*steps,*/ done, msec ; ^ mrisutils.c:2254:7: warning: variable ���num_path��� set but not used [-Wunused-but-set-variable] int num_path = 0; ^ mrisurf.c: In function ���MRISunfold���: mrisurf.c:7593:37: warning: variable ���l_area��� set but not used [-Wunused-but-set-variable] double starting_sse, ending_sse, l_area, pct_error ; ^ mrisutils.c: In function ���MRIScomputeFlattenedVolume���: mrisutils.c:2377:53: warning: variable ���outside_samples��� set but not used [-Wunused-but-set-variable] int uk, vk, ui, vi, whalf = 3, nv, wm_samples, outside_samples ; ^ mrisurf.c:7593:11: warning: variable ���starting_sse��� set but not used [-Wunused-but-set-variable] double starting_sse, ending_sse, l_area, pct_error ; ^ mrisutils.c:2377:41: warning: variable ���wm_samples��� set but not used [-Wunused-but-set-variable] int uk, vk, ui, vi, whalf = 3, nv, wm_samples, outside_samples ; ^ mrisurf.c: In function ���MRISintegrate���: mrisurf.c:8670:32: warning: variable ���pct_neg_area��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8670:23: warning: variable ���pct_neg��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8669:27: warning: variable ���l_spring��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8669:19: warning: variable ���l_area��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8669:11: warning: variable ���l_dist��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c: In function ���MRIScomputeTriangleProperties���: mrisurf.c:11337:38: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float area, angle, dot, cross, dz ; ^ mrisurf.c: In function ���mrisAsynchronousTimeStepNew���: mrisurf.c:11703:21: warning: variable ���dot��� set but not used [-Wunused-but-set-variable] float dist, dot, dx, dy, dz ; ^ mrisurf.c:11703:15: warning: variable ���dist��� set but not used [-Wunused-but-set-variable] float dist, dot, dx, dy, dz ; ^ mrisurf.c: In function ���MRISreadCTABFromAnnotationIfPresent���: mrisurf.c:14207:9: warning: variable ���skip��� set but not used [-Wunused-but-set-variable] int skip,j,num; ^ mrisurf.c: In function ���MRISisCTABPresentInAnnotation���: mrisurf.c:14283:9: warning: variable ���skip��� set but not used [-Wunused-but-set-variable] int skip,j,num; ^ mrisurf.c: In function ���MRISreadValuesIntoArray���: mrisurf.c:14459:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���MRISreadValuesBak���: mrisurf.c:14656:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���MRISreadImagValues���: mrisurf.c:14702:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���mrisComputeQuadraticCurvatureSSE���: mrisurf.c:16339:20: warning: variable ���a��� set but not used [-Wunused-but-set-variable] float ui, vi, a, e ; ^ mrisurf.c: In function ���mrisRemoveEdge���: mrisurf.c:17180:17: warning: variable ���v2��� set but not used [-Wunused-but-set-variable] VERTEX *v1, *v2 ; ^ mrisurf.c: In function ���MRISinflateBrain���: mrisurf.c:18603:58: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double delta_t = 0.0, rms_height, desired_rms_height, sse, l_dist ; ^ mrisurf.c: In function ���MRISinflateToSphere���: mrisurf.c:18782:44: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double delta_t = 0.0, rms_radial_error, sse, base_dt ; ^ mrisurf.c: In function ���mrisLabelVertices���: mrisurf.c:19878:22: warning: variable ���d��� set but not used [-Wunused-but-set-variable] float xd, yd, zd, d ; ^ mrisurf.c: In function ���mrisComputeDuraError���: mrisurf.c:20660:17: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:20660:14: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:20660:11: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c: In function ���mrisComputeMaxSpringTerm���: mrisurf.c:21968:16: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int vno, n, m, m_max ; ^ mrisurf.c: In function ���mrisComputeDistanceTerm���: mrisurf.c:22627:32: warning: variable ���vsmooth��� set but not used [-Wunused-but-set-variable] float d0, dt, delta, nc, vsmooth = 1.0 ; ^ mrisurf.c:22554:26: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] float l_dist, scale, max_del, norm ; ^ mrisurf.c: In function ���mrisComputeDistanceError���: mrisurf.c:23257:33: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] double dist_scale, sse_dist, max_del ; ^ mrisurf.c:23256:16: warning: variable ���max_v��� set but not used [-Wunused-but-set-variable] int vno, max_v, max_n, err_cnt, max_errs ; ^ mrisurf.c: In function ���mrisComputeNonlinearDistanceSSE���: mrisurf.c:23443:47: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] double dist_scale, sse_dist, delta, v_sse, max_del, ratio ; ^ mrisurf.c:23442:30: warning: variable ���max_v��� set but not used [-Wunused-but-set-variable] int vno, n, nvertices, max_v, max_n ; ^ mrisurf.c: In function ���ashburnerTriangleEnergy���: mrisurf.c:23905:52: warning: variable ���m_V��� set but not used [-Wunused-but-set-variable] static MATRIX *m_x, *m_x_inv, *m_y, *m_J, *m_U, *m_V, *m_m, ^ mrisurf.c:23905:46: warning: variable ���m_U��� set but not used [-Wunused-but-set-variable] static MATRIX *m_x, *m_x_inv, *m_y, *m_J, *m_U, *m_V, *m_m, ^ mrisurf.c: In function ���mrisComputeThicknessNormalEnergy���: mrisurf.c:24187:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeThicknessParallelEnergy���: mrisurf.c:24363:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeAshburnerTriangleEnergy���: mrisurf.c:24426:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno = -1 ; ^ mrisurf.c: In function ���mrisComputeThicknessSpringTerm���: mrisurf.c:25045:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeRepulsiveEnergy���: mrisurf.c:25323:21: warning: variable ���min_vno��� set but not used [-Wunused-but-set-variable] int vno, num, min_vno, i, n ; ^ mrisurf.c:25323:16: warning: variable ���num��� set but not used [-Wunused-but-set-variable] int vno, num, min_vno, i, n ; ^ mrisurf.c: In function ���mrisComputeThicknessSmoothnessTerm���: mrisurf.c:25556:29: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c:25556:26: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c:25556:23: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c: In function ���mrisComputeNonlinearSpringTerm���: mrisurf.c:26142:23: warning: variable ���sse_spring��� set but not used [-Wunused-but-set-variable] double area_scale, sse_spring, E, F, f, rmin, rmax ; ^ mrisurf.c:26142:11: warning: variable ���area_scale��� set but not used [-Wunused-but-set-variable] double area_scale, sse_spring, E, F, f, rmin, rmax ; ^ mrisurf.c: In function ���MRIScomputeMetricProperties���: mrisurf.c:27362:12: warning: variable ���old_area��� set but not used [-Wunused-but-set-variable] double old_area ; ^ mrisurf.c: In function ���MRISwritePatchAscii���: mrisurf.c:29083:43: warning: variable ���type��� set but not used [-Wunused-but-set-variable] int vno, fno, n, nvertices, nfaces, type ; ^ mrisurf.c: In function ���mrisReadGeoFile���: mrisurf.c:29290:43: warning: variable ���patch��� set but not used [-Wunused-but-set-variable] int vno, fno, n, nvertices, nfaces, patch, vertices_per_face, nedges ; ^ mrisurf.c: In function ���mrisReadGeoFilePositions���: mrisurf.c:29371:35: warning: variable ���patch��� set but not used [-Wunused-but-set-variable] int vno, nvertices, nfaces, patch, vertices_per_face, nedges ; ^ mrisurf.c: In function ���mrisComputeCorrelationError���: mrisurf.c:29868:17: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeVectorCorrelationTerm���: mrisurf.c:30253:35: warning: variable ���vm1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:30: warning: variable ���vp1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:25: warning: variable ���um1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:20: warning: variable ���up1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c: In function ���mrisComputePolarCorrelationTerm���: mrisurf.c:30540:17: warning: variable ���fno��� set but not used [-Wunused-but-set-variable] int vno, fno ; ^ mrisurf.c: In function ���MRISuseCurvatureStretch���: mrisurf.c:33225:40: warning: variable ���curv��� set but not used [-Wunused-but-set-variable] float kmin, kmax, dist, dist_orig, curv, dist_scale, max_stretch, stretch ; ^ mrisurf.c: In function ���MRISremoveCompressedRegions���: mrisurf.c:33848:21: warning: variable ���delta_t��� set but not used [-Wunused-but-set-variable] double delta_t, l_spring, l_convex, l_max_spring ; ; ^ mrisurf.c: In function ���MRISpositionSurfaces���: mrisurf.c:33954:37: warning: variable ���l_intensity��� set but not used [-Wunused-but-set-variable] dt, l_intensity, base_dt, last_sse, rms, mle_sse, last_mle_sse, ^ mrisurf.c: In function ���MRISpositionSurface���: mrisurf.c:34318:37: warning: variable ���last_sse��� set but not used [-Wunused-but-set-variable] l_intensity, base_dt, last_sse,last_rms, max_mm; ^ mrisurf.c: In function ���MRISpositionSurface_mef���: mrisurf.c:34803:15: warning: variable ���last_sse��� set but not used [-Wunused-but-set-variable] sse, last_sse, delta_rms ; ^ mrisurf.c: In function ���mrisDirectionTriangleIntersection���: mrisurf.c:36220:30: warning: variable ���lastz��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36220:23: warning: variable ���lasty��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36220:16: warning: variable ���lastx��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36219:16: warning: variable ���last_bucket��� set but not used [-Wunused-but-set-variable] static MHBT *last_bucket = NULL ; ^ mrisurf.c: In function ���MRIScomputeInvertedGrayWhiteBorderValues���: mrisurf.c:38462:32: warning: variable ���inward_increasing��� set but not used [-Wunused-but-set-variable] int total_vertices, vno, inward_increasing, ngray, nwhite ; ^ mrisurf.c: In function ���MRIScomputeMaxGradBorderValues���: mrisurf.c:38634:42: warning: variable ���std_wm_val��� set but not used [-Wunused-but-set-variable] float min_wm_val, mean_wm_val, std_wm_val ; ^ mrisurf.c:38567:14: warning: variable ���box��� set but not used [-Wunused-but-set-variable] MRI_REGION box ; ^ mrisurf.c: In function ���MRIScomputeMaxGradBorderValuesPial���: mrisurf.c:38864:14: warning: variable ���box��� set but not used [-Wunused-but-set-variable] MRI_REGION box ; ^ mrisurf.c: In function ���MRIScomputeInvertedPialBorderValues���: mrisurf.c:39321:28: warning: variable ���inward_increasing��� set but not used [-Wunused-but-set-variable] int total_vertices, vno, inward_increasing, ngray, ncsf ; ^ mrisurf.c: In function ���mrisRmsValError���: mrisurf.c:40653:27: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c:40653:23: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c:40653:19: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c: In function ���mrisRmsValError_mef���: mrisurf.c:40717:19: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, n, max_vno; //, xv, yv, zv ; ^ mrisurf.c: In function ���MRISstoreAnalyticDistances���: mrisurf.c:40933:24: warning: variable ���smean_orig_error��� set but not used [-Wunused-but-set-variable] smean_error, smean_orig_error ; ^ mrisurf.c:40932:32: warning: variable ���mean_orig_error��� set but not used [-Wunused-but-set-variable] double pct_orig, pct, mean, mean_orig_error, mean_error, ^ mrisurf.c: In function ���mrisComputeIntensityError���: mrisurf.c:41459:17: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:41459:14: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:41459:11: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c: In function ���mrisDivideFace���: mrisurf.c:43597:11: warning: variable ���v1��� set but not used [-Wunused-but-set-variable] VERTEX *v1, *v2, *v3, *vnew ; ^ mrisurf.c: In function ���MRISmarkPatchVertices���: mrisurf.c:48580:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���computeVolumeLikelihood���: mrisurf.c:48718:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c:48712:21: warning: variable ���gray_mean��� set but not used [-Wunused-but-set-variable] double white_mean,gray_mean,white_vol,gray_vol; ^ mrisurf.c:48712:10: warning: variable ���white_mean��� set but not used [-Wunused-but-set-variable] double white_mean,gray_mean,white_vol,gray_vol; ^ mrisurf.c:48710:36: warning: variable ���delta��� set but not used [-Wunused-but-set-variable] double int_g,int_w,val,val2,dval,delta,delta_ll; ^ mrisurf.c: In function ���MRIScomputeFitness���: mrisurf.c:48835:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���saveSegmentation���: mrisurf.c:49763:11: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c:49763:9: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c:49763:7: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c: In function ���retessellateDefect���: mrisurf.c:52844:24: warning: variable ���max_added��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index,ndiscarded; ^ mrisurf.c:52844:17: warning: variable ���max_i��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index,ndiscarded; ^ mrisurf.c: In function ���MRISmarkAmbiguousVertices���: mrisurf.c:56725:10: warning: variable ���area_scale��� set but not used [-Wunused-but-set-variable] double area_scale ; ^ mrisurf.c: In function ���mrisSegmentDefect���: mrisurf.c:57026:19: warning: variable ���vadded��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn,*vadded ; ^ mrisurf.c:57025:49: warning: variable ���vno1��� set but not used [-Wunused-but-set-variable] int vlist[200000], i, j,n, nfilled ,nadded,vno1,m; ^ mrisurf.c: In function ���MRISbinarizeVolume���: mrisurf.c:58571:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c: In function ���MRIScomputeDistanceVolume���: mrisurf.c:59666:8: warning: variable ���ffrom��� set but not used [-Wunused-but-set-variable] int *ffrom, *fto,*vfrom, *vto; ^ mrisurf.c:59658:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c: In function ���mrisComputeDefectMRILogUnlikelihood���: mrisurf.c:60324:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c:60309:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���mrisFindOptimalDefectMapping���: mrisurf.c:63004:38: warning: variable ���first_border_vertex��� set but not used [-Wunused-but-set-variable] int vno,n,m,i, first_inside_vertex,first_border_vertex; ^ mrisurf.c: In function ���mrisTessellateDefect���: mrisurf.c:63440:34: warning: variable ���val0��� set but not used [-Wunused-but-set-variable] double x, y, z, xv, yv, zv, val0, val, ^ mrisurf.c: In function ���mrisCountIntersectingFaces���: mrisurf.c:64336:21: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] double d0,d1,d2,d,scale,SCALE_FACTOR; ^ mrisurf.c: In function ���mrisComputeRandomRetessellation���: mrisurf.c:66004:37: warning: variable ���last_euthanasia��� set but not used [-Wunused-but-set-variable] int *overlap ,ngenerations,nbests,last_euthanasia; ^ mrisurf.c:66003:21: warning: variable ���best_i��� set but not used [-Wunused-but-set-variable] int niters,m, tmp,best_i, i,j, k,noverlap ; ^ mrisurf.c: In function ���mrisRetessellateDefect���: mrisurf.c:66486:24: warning: variable ���max_added��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index ; ^ mrisurf.c:66486:17: warning: variable ���max_i��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index ; ^ mrisurf.c: In function ���mrisAddAllDefectFaces���: mrisurf.c:67951:11: warning: variable ���edge��� set but not used [-Wunused-but-set-variable] EDGE edge ; ^ mrisurf.c: In function ���MRISmarkOrientationChanges���: mrisurf.c:68786:33: warning: variable ���d1��� set but not used [-Wunused-but-set-variable] int face1,face2,vn0,p,vn1,vn2,d1,d2,count; ^ mrisurf.c: In function ���MRISdilateConfined���: mrisurf.c:70230:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisurf.c: In function ���MRISfbirnMask_SFG_Cing���: mrisurf.c:70312:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisurf.c: In function ���MRISfbirnMask_MOF_RACing���: mrisurf.c:70370:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisurf.c: In function ���MRISreadNewCurvatureFile���: mrisurf.c:72823:17: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int k,vnum,fnum, vals_per_vertex ; ^ mrisurf.c: In function ���MRISreadNewCurvatureIntoArray���: mrisurf.c:72954:17: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int k,vnum,fnum; ^ mrisurf.c: In function ���MRISpaintVolume���: mrisurf.c:73027:32: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisurf.c:73027:24: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisurf.c:73027:17: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisurf.c: In function ���MRISsmoothMRIFast���: mrisurf.c:73978:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISsmoothMRIFastD���: mrisurf.c:74152:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISsmoothMRIFastFrame���: mrisurf.c:74301:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISgaussianSmooth���: mrisurf.c:76201:10: warning: variable ���err��� set but not used [-Wunused-but-set-variable] int n, err, nXNbrs, *XNbrVtxNo, frame; ^ mrisurf.c: In function ���MRISdistSphere���: mrisurf.c:76627:10: warning: variable ���err��� set but not used [-Wunused-but-set-variable] int n, err, *nXNbrs, nXNbrsMax; ^ mv -f .deps/mrisp.Tpo .deps/mrisp.Po mrisurf.c: In function ���MRISaverageMarkedVertexPositions���: mrisurf.c:77605:10: warning: variable ���nmarked��� set but not used [-Wunused-but-set-variable] int nmarked ; ^ mrisurf.c: In function ���MRISfillWhiteMatterInterior���: gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_tess.o -MD -MP -MF .deps/mri_tess.Tpo -c -o mri_tess.o mri_tess.c mrisurf.c:78628:11: warning: variable ���vox_volume��� set but not used [-Wunused-but-set-variable] double vox_volume ; ^ mrisurf.c: In function ���FACES_aroundVertex_reorder���: mrisurf.c:79929:9: warning: variable ���b_borderFound��� set but not used [-Wunused-but-set-variable] short b_borderFound = 0; ^ mrisurf.c: In function ���FACES_angleNormal_find���: mrisurf.c:80008:19: warning: variable ���pv_crossIJ��� set but not used [-Wunused-but-set-variable] static VECTOR* pv_crossIJ = NULL; // Cross product of input vectors ^ mrisurf.c: In function ���mrisComputeSurfaceRepulsionEnergy���: mrisurf.c:80716:22: warning: variable ���max_dot��� set but not used [-Wunused-but-set-variable] float max_scale, max_dot ; ^ mrisurf.c:80714:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno, i ; ^ mrisurf.c: In function ���MRISsampleFace���: mrisurf.c:81894:15: warning: variable ���ret��� set but not used [-Wunused-but-set-variable] int n, ret ; ^ mrisurf.c: In function ���MRISsampleFaceNormal���: mrisurf.c:81928:35: warning: variable ���xc��� set but not used [-Wunused-but-set-variable] float d, dtotal, dx, dy, dz, xc, yc, zc ; ^ mrisurf.c: In function ���MRISlaplacian���: mrisurf.c:82104:15: warning: variable ���vn��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn ; ^ mrisurf.c:82103:24: warning: variable ���num��� set but not used [-Wunused-but-set-variable] int vno, vno2, i, num, n ; ^ mrisurf.c: In function ���MRISsampleValue���: mrisurf.c:82146:15: warning: variable ���dy1��� set but not used [-Wunused-but-set-variable] dx1, dy1, dx2, dy2, e1x, e1y, e1z, e2x, e2y, e2z, x0, y0, a0, a1, a2, ^ mrisurf.c: In function ���MRIcomputeLaminarVolumeFractions���: mrisurf.c:83202:26: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c:83202:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c:83202:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c: In function ���vlst_loglikelihood2D���: mrisurf.c:83535:45: warning: variable ���dist��� set but not used [-Wunused-but-set-variable] double ll = 0.0, dot, dx, dy, dz, pval, dist ; ^ mrisurf.c: In function ���mrisComputePosterior2DTerm���: mrisurf.c:85164:14: warning: variable ���best_dn��� set but not used [-Wunused-but-set-variable] double best_dn = 0, best_ll = -1e10 ; ^ mri_tess.c: In function ���freeTesselationParms���: mri_tess.c:360:13: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int depth,width,height; ^ mri_tess.c: In function ���saveTesselation���: mri_tess.c:529:23: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:19: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:15: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:12: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:9: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c: In function ���make_surface_with_connectivity���: mri_tess.c:1062:39: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int imnr,i,j,k,f_pack,v_ind,f,a,b,c,label,nlabels,comp,m; ^ mv -f .deps/mriset.Tpo .deps/mriset.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_topology.o -MD -MP -MF .deps/mri_topology.Tpo -c -o mri_topology.o mri_topology.c mri_topology.c: In function ���guessSegmentation���: mri_topology.c:2376:16: warning: variable ���pis��� set but not used [-Wunused-but-set-variable] float ps,pcs,pis,pi,psi,pcsi; ^ mri_topology.c:2376:12: warning: variable ���pcs��� set but not used [-Wunused-but-set-variable] float ps,pcs,pis,pi,psi,pcsi; ^ mri_topology.c: In function ���segmentVoxel���: mri_topology.c:3267:24: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int max,width,height,depth,nvox,x,y,z,label,a,b,c,val,sval,i,j,k,n; ^ mri_topology.c:3267:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int max,width,height,depth,nvox,x,y,z,label,a,b,c,val,sval,i,j,k,n; ^ mri_topology.c:3267:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int max,width,height,depth,nvox,x,y,z,label,a,b,c,val,sval,i,j,k,n; ^ mri_topology.c: In function ���segmentConnectedComponents���: mri_topology.c:3481:47: warning: variable ���connectivity��� set but not used [-Wunused-but-set-variable] , border_labels[27], nlabels, label, nvox,m,connectivity,con,max; ^ mri_topology.c:3480:35: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int sum,x, y, z, width, height, depth, xi, yi, zi, xk, yk, zk ^ mri_topology.c:3480:27: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int sum,x, y, z, width, height, depth, xi, yi, zi, xk, yk, zk ^ mri_topology.c:3480:20: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int sum,x, y, z, width, height, depth, xi, yi, zi, xk, yk, zk ^ mri_topology.c: In function ���mergeRCC���: mri_topology.c:3715:23: warning: variable ���component��� set but not used [-Wunused-but-set-variable] ConnectedComponent *component; ^ mri_topology.c: In function ���findandRemoveComponents���: mri_topology.c:4077:81: warning: variable ���mri_dist��� set but not used [-Wunused-but-set-variable] MRI *mri=parms->mri_bin,*mri_labeled=parms->mri_labeled,*mri_prior,*mri_cost,*mri_dist; ^ mri_topology.c: In function ���finalConditionalExpansion���: mri_topology.c:4522:28: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int width,height,depth,n,label,ref,x,y,z,xinit,yinit,zinit,i,j,k,val; ^ mv -f .deps/mrisutils.Tpo .deps/mrisutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mri_transform.o -MD -MP -MF .deps/mri_transform.Tpo -c -o mri_transform.o mri_transform.c mri_transform.c: In function ���trans_VoxelIndexToRAS���: mri_transform.c:88:26: warning: variable ���irVoxZ��� set but not used [-Wunused-but-set-variable] double irVoxX, irVoxY, irVoxZ ; ^ mri_transform.c:88:18: warning: variable ���irVoxY��� set but not used [-Wunused-but-set-variable] double irVoxX, irVoxY, irVoxZ ; ^ mri_transform.c:88:10: warning: variable ���irVoxX��� set but not used [-Wunused-but-set-variable] double irVoxX, irVoxY, irVoxZ ; ^ mv -f .deps/mri_transform.Tpo .deps/mri_transform.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriTransform.o -MD -MP -MF .deps/mriTransform.Tpo -c -o mriTransform.o mriTransform.c mv -f .deps/mri_tess.Tpo .deps/mri_tess.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriVolume.o -MD -MP -MF .deps/mriVolume.Tpo -c -o mriVolume.o mriVolume.c In file included from ../include/mriTransform.h:35:0, from ../include/mriVolume.h:33, from mriVolume.c:30: mriVolume.c: In function ���Volm_New���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:146:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Delete���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:236:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_DeepClone���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:365:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CreateFromVolume���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:441:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ImportData���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:489:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetFromMRI_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:597:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CalculateMRIIdxToAnaIdx_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:694:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetMaxValueAtMRIIdx_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:744:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ExportNormToCOR���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:788:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Save���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:837:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_LoadDisplayTransform���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:945:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_UnloadDisplayTransform���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:984:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CopyGeometryInformation���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1014:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetDimensions���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1121:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetNumberOfFrames���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1151:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1182:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetValueMinMax���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1214:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetResampleMethod���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1244:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetResampleMethod���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1294:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1324:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1353:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetValueAtIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1387:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetValueAtIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1439:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetValueAtIdxFrame���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1476:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetValueAtIdxFrame���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1522:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetValueAtMRIIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1554:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetValueAtMRIIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1596:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_HasTalTransform���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1632:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertIdxToRAS���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1680:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertRASToIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1725:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertIdxToMNITal���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1772:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertIdxToTal���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1829:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertTalToIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1884:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertIdxToScanner���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1921:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertMRIIdxToScanner���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1953:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertIdxToMRIIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:1988:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertMRIIdxToIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2023:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertMRIIdxToRAS���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2065:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertRASToMRIIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2104:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertMRIIdxToSurfaceRAS���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2147:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ConvertSurfaceRASToMRIIdx���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2186:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetMRIIdxToAnaIdxTransform���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2219:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Flood���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2460:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_VisitAllVoxels���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2540:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_FindMaxValues���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2644:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_MakeColorTable���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2723:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetBrightnessAndContrast���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2756:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetColorMinMax���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2800:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_GetBrightnessAndContrast���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2830:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SaveToSnapshot���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2885:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_RestoreFromSnapshot���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2935:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Rotate���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:2989:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Threshold���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3037:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Flip���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3128:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetAllValues���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3153:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CopySubjectName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3183:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CopyVolumeName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3213:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_CopySourceDir���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3243:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3266:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetSubjectName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3294:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetVolumeName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3322:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ExtractAndSetSubjectName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3449:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_ExtractAndSetVolumeName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3501:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_SetMinVoxelSizeToOne���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3554:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Conform���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3586:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mriVolume.c: In function ���Volm_Verify���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Volm_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriVolume.c:3998:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Volm_tErr_NoErr, Volm_GetErrorString ); ^ mv -f .deps/mriTransform.Tpo .deps/mriTransform.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mrivoxel.o -MD -MP -MF .deps/mrivoxel.Tpo -c -o mrivoxel.o mrivoxel.c mrivoxel.c: In function ���MRIvoxelDx���: mrivoxel.c:62:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, xm1, xp1, ym1, yp1 ; ^ mrivoxel.c:62:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, xm1, xp1, ym1, yp1 ; ^ mrivoxel.c: In function ���MRIvoxelDy���: mrivoxel.c:97:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, xm1, xp1, ym1, yp1 ; ^ mrivoxel.c:97:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, xm1, xp1, ym1, yp1 ; ^ mrivoxel.c: In function ���MRIvoxelDz���: mrivoxel.c:132:18: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, depth, xm1, xp1, zm1, zp1 ; ^ mrivoxel.c:132:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, depth, xm1, xp1, zm1, zp1 ; ^ mrivoxel.c: In function ���MRIvoxelMean���: mrivoxel.c:188:12: warning: variable ���psrc��� set but not used [-Wunused-but-set-variable] BUFTYPE *psrc ; ^ mrivoxel.c: In function ���MRIvoxelDirection���: mrivoxel.c:354:55: warning: variable ���total��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth, x, y, z, npix, total, xmin, xmax, ^ mrivoxel.c:354:49: warning: variable ���npix��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth, x, y, z, npix, total, xmin, xmax, ^ mrivoxel.c: In function ���MRIvoxelGradientDir2ndDerivative���: mrivoxel.c:434:33: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth ; ^ mrivoxel.c:434:25: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth ; ^ mrivoxel.c:434:18: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth ; ^ mrivoxel.c: In function ���MRIvoxelMedian���: mrivoxel.c:522:49: warning: variable ���npix��� set but not used [-Wunused-but-set-variable] int whalf, width, height, depth, x, y, z, npix, xmin, xmax, median_index, ^ mv -f .deps/mrivoxel.Tpo .deps/mrivoxel.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT nifti1_io.o -MD -MP -MF .deps/nifti1_io.Tpo -c -o nifti1_io.o nifti1_io.c nifti1_io.c: In function ���nifti_image_from_ascii���: nifti1_io.c:5894:24: warning: variable ���slen��� set but not used [-Wunused-but-set-variable] int ii , spos, nn , slen ; ^ mv -f .deps/mriVolume.Tpo .deps/mriVolume.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT offset.o -MD -MP -MF .deps/offset.Tpo -c -o offset.o offset.c mv -f .deps/offset.Tpo .deps/offset.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT path.o -MD -MP -MF .deps/path.Tpo -c -o path.o path.c mv -f .deps/path.Tpo .deps/path.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT pdf.o -MD -MP -MF .deps/pdf.Tpo -c -o pdf.o pdf.c mv -f .deps/pdf.Tpo .deps/pdf.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT pgmstubs.o -MD -MP -MF .deps/pgmstubs.Tpo -c -o pgmstubs.o pgmstubs.c mv -f .deps/pgmstubs.Tpo .deps/pgmstubs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT prime.o -MD -MP -MF .deps/prime.Tpo -c -o prime.o prime.c mv -f .deps/prime.Tpo .deps/prime.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT Progname.o -MD -MP -MF .deps/Progname.Tpo -c -o Progname.o Progname.c mv -f .deps/Progname.Tpo .deps/Progname.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT queue.o -MD -MP -MF .deps/queue.Tpo -c -o queue.o queue.c queue.c: In function ���Qalloc���: queue.c:80:7: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int i=max_elts; ^ mv -f .deps/nifti1_io.Tpo .deps/nifti1_io.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT randomfields.o -MD -MP -MF .deps/randomfields.Tpo -c -o randomfields.o randomfields.c mv -f .deps/queue.Tpo .deps/queue.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rbf.o -MD -MP -MF .deps/rbf.Tpo -c -o rbf.o rbf.c rbf.c: In function ���rbfAdjustOutputWeights���: rbf.c:679:10: warning: variable ���dE_dwi��� set but not used [-Wunused-but-set-variable] float dE_dwi, Gi, delta_wij, one_minus_momentum, trate, ^ rbf.c: In function ���rbfComputeCurrentError���: rbf.c:1286:31: warning: variable ���rms��� set but not used [-Wunused-but-set-variable] float error, sse, obs_no, rms ; ^ mv -f .deps/mri_topology.Tpo .deps/mri_topology.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rbm.o -MD -MP -MF .deps/rbm.Tpo -c -o rbm.o rbm.c rbm.c: In function ���RBMactivateBackward���: rbm.c:561:14: warning: variable ���var��� set but not used [-Wunused-but-set-variable] double var ; ^ rbm.c: In function ���RBMtrainFromVoxlistImage���: rbm.c:1079:5: warning: variable ���mean��� set but not used [-Wunused-but-set-variable] mean, var ; ^ rbm.c:1076:12: warning: variable ���sparsity��� set but not used [-Wunused-but-set-variable] double sparsity, training_rate, last_rms, pct_diff, rms, momentum, delta,min_rms, ^ rbm.c: In function ���DBNtrainFromVoxlistImage���: rbm.c:1532:5: warning: variable ���mean��� set but not used [-Wunused-but-set-variable] mean, var ; ^ rbm.c:1529:12: warning: variable ���sparsity��� set but not used [-Wunused-but-set-variable] double sparsity, training_rate, last_rms, pct_diff, rms, momentum, delta,min_rms, ^ rbm.c: In function ���reset_hidden_nodes���: rbm.c:2152:10: warning: variable ���wt_lim��� set but not used [-Wunused-but-set-variable] double wt_lim ; ^ rbm.c: In function ���CDBNtrainFromVoxlistImage���: rbm.c:2200:74: warning: variable ���saved_rms��� set but not used [-Wunused-but-set-variable] mean, var, label_rms, min_label_rms, last_label_rms, label_pct_diff, saved_rms ; ^ rbm.c: In function ���CDBNvoxlistRMS���: rbm.c:2539:22: warning: variable ���f��� set but not used [-Wunused-but-set-variable] int i, x, y, z, f, n, ind, h, v, nvox, current_label, l ; ^ rbm.c: In function ���CDBNcomputeGradients���: rbm.c:2629:22: warning: variable ���f��� set but not used [-Wunused-but-set-variable] int i, x, y, z, f, n, v, h, ind, current_label ; ^ rbm.c: In function ���CDBNcomputeDiscriminativeGradients���: rbm.c:2812:25: warning: variable ���f��� set but not used [-Wunused-but-set-variable] int l, i, x, y, z, f, n, v, h, ind, current_label ; ^ rbm.c: In function ���CDBNcomputeLabelGradients���: rbm.c:2935:25: warning: variable ���f��� set but not used [-Wunused-but-set-variable] int l, i, x, y, z, f, n, v, h, ind, current_label ; ^ mv -f .deps/randomfields.Tpo .deps/randomfields.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rec.o -MD -MP -MF .deps/rec.Tpo -c -o rec.o rec.c mv -f .deps/rbf.Tpo .deps/rbf.Po mv -f .deps/rec.Tpo .deps/rec.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT region.o -MD -MP -MF .deps/region.Tpo -c -o region.o region.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT registerio.o -MD -MP -MF .deps/registerio.Tpo -c -o registerio.o registerio.c mv -f .deps/region.Tpo .deps/region.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT resample.o -MD -MP -MF .deps/resample.Tpo -c -o resample.o resample.c mv -f .deps/registerio.Tpo .deps/registerio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rescale.o -MD -MP -MF .deps/rescale.Tpo -c -o rescale.o rescale.c resample.c: In function ���MRISapplyReg���: resample.c:910:30: warning: variable ���nunmapped��� set but not used [-Wunused-but-set-variable] int npairs, kS, kT, nhits, nunmapped; ^ resample.c: In function ���surf2surf_nnfr_jac���: resample.c:1318:24: warning: variable ���nunmapped��� set but not used [-Wunused-but-set-variable] int svtx, tvtx, f,n, nunmapped, nrevhits,nSrcLost,nhits; ^ mv -f .deps/rescale.Tpo .deps/rescale.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT retinotopy.o -MD -MP -MF .deps/retinotopy.Tpo -c -o retinotopy.o retinotopy.c mv -f .deps/retinotopy.Tpo .deps/retinotopy.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rfa.o -MD -MP -MF .deps/rfa.Tpo -c -o rfa.o rfa.c rfa.c: In function ���RFAsourceVoxelToNode���: rfa.c:169:11: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int retval ; ^ mv -f .deps/rfa.Tpo .deps/rfa.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rfutils.o -MD -MP -MF .deps/rfutils.Tpo -c -o rfutils.o rfutils.c mv -f .deps/rfutils.Tpo .deps/rfutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT rforest.o -MD -MP -MF .deps/rforest.Tpo -c -o rforest.o rforest.c mv -f .deps/resample.Tpo .deps/resample.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT selxavgio.o -MD -MP -MF .deps/selxavgio.Tpo -c -o selxavgio.o selxavgio.c mv -f .deps/selxavgio.Tpo .deps/selxavgio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT sig.o -MD -MP -MF .deps/sig.Tpo -c -o sig.o sig.c mv -f .deps/sig.Tpo .deps/sig.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT signa.o -MD -MP -MF .deps/signa.Tpo -c -o signa.o signa.c mv -f .deps/signa.Tpo .deps/signa.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT stats.o -MD -MP -MF .deps/stats.Tpo -c -o stats.o stats.c stats.c: In function ���StatFree���: stats.c:722:29: warning: variable ���nslices��� set but not used [-Wunused-but-set-variable] int event, width, height, nslices ; ^ stats.c:722:21: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int event, width, height, nslices ; ^ stats.c:722:14: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int event, width, height, nslices ; ^ stats.c: In function ���StatAccumulateSurfaceVolume���: stats.c:881:19: warning: variable ���szoff��� set but not used [-Wunused-but-set-variable] sxoff, syoff, szoff, xs, ys, zs ; ^ stats.c:881:12: warning: variable ���syoff��� set but not used [-Wunused-but-set-variable] sxoff, syoff, szoff, xs, ys, zs ; ^ stats.c:881:5: warning: variable ���sxoff��� set but not used [-Wunused-but-set-variable] sxoff, syoff, szoff, xs, ys, zs ; ^ stats.c:880:69: warning: variable ���zoff��� set but not used [-Wunused-but-set-variable] float mean, surf_mean, std, surf_std, surf_dof, dof, xoff, yoff, zoff, ^ stats.c:880:63: warning: variable ���yoff��� set but not used [-Wunused-but-set-variable] float mean, surf_mean, std, surf_std, surf_dof, dof, xoff, yoff, zoff, ^ stats.c:880:57: warning: variable ���xoff��� set but not used [-Wunused-but-set-variable] float mean, surf_mean, std, surf_std, surf_dof, dof, xoff, yoff, zoff, ^ stats.c: In function ���StatAccumulateTalairachVolume���: stats.c:1096:21: warning: variable ���mri_std��� set but not used [-Wunused-but-set-variable] MRI *mri_avg, *mri_std ; ^ stats.c:1094:12: warning: variable ���szoff��� set but not used [-Wunused-but-set-variable] syoff, szoff ; ^ stats.c:1094:5: warning: variable ���syoff��� set but not used [-Wunused-but-set-variable] syoff, szoff ; ^ stats.c:1093:72: warning: variable ���sxoff��� set but not used [-Wunused-but-set-variable] float mean, tal_mean, std, tal_std, tal_dof, dof, xoff, yoff, zoff, sxoff, ^ stats.c:1093:66: warning: variable ���zoff��� set but not used [-Wunused-but-set-variable] float mean, tal_mean, std, tal_std, tal_dof, dof, xoff, yoff, zoff, sxoff, ^ stats.c:1093:60: warning: variable ���yoff��� set but not used [-Wunused-but-set-variable] float mean, tal_mean, std, tal_std, tal_dof, dof, xoff, yoff, zoff, sxoff, ^ stats.c:1093:54: warning: variable ���xoff��� set but not used [-Wunused-but-set-variable] float mean, tal_mean, std, tal_std, tal_dof, dof, xoff, yoff, zoff, sxoff, ^ stats.c: In function ���StatWriteVolume���: stats.c:1282:45: warning: variable ���nslices��� set but not used [-Wunused-but-set-variable] int event_number, width, height, nslices, t, ^ mv -f .deps/rforest.Tpo .deps/rforest.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT stc.o -MD -MP -MF .deps/stc.Tpo -c -o stc.o stc.c mv -f .deps/rbm.Tpo .deps/rbm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT surfcluster.o -MD -MP -MF .deps/surfcluster.Tpo -c -o surfcluster.o surfcluster.c mv -f .deps/stc.Tpo .deps/stc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT svm.o -MD -MP -MF .deps/svm.Tpo -c -o svm.o svm.c svm.c: In function ���SVMread���: svm.c:581:23: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int i, ninputs, retval, j, ntraining ; ^ mv -f .deps/stats.Tpo .deps/stats.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tags.o -MD -MP -MF .deps/tags.Tpo -c -o tags.o tags.c mv -f .deps/svm.Tpo .deps/svm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT talairachex.o -MD -MP -MF .deps/talairachex.Tpo -c -o talairachex.o talairachex.c tags.c: In function ���TAGwriteEnd���: tags.c:107:13: warning: variable ���here��� set but not used [-Wunused-but-set-variable] long long here ; ^ tags.c: In function ���znzTAGwriteEnd���: tags.c:260:13: warning: variable ���here��� set but not used [-Wunused-but-set-variable] long long here ; ^ tags.c: In function ���znzWriteMatrix���: tags.c:286:13: warning: variable ���here��� set but not used [-Wunused-but-set-variable] long long here, len ; ^ tags.c: In function ���znzReadMatrix���: tags.c:334:13: warning: variable ���here��� set but not used [-Wunused-but-set-variable] long long here, len ; ^ tags.c:333:8: warning: variable ���ret��� set but not used [-Wunused-but-set-variable] int ret ; ^ talairachex.c: In function ���MRIextractTalairachPlaneEx���: talairachex.c:411:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, x0, y0, z0 ; ^ talairachex.c: In function ���MRIeraseTalairachPlaneNewEx���: talairachex.c:525:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, xt0, yt0, zt0 ; ^ mv -f .deps/tags.Tpo .deps/tags.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT thread.o -MD -MP -MF .deps/thread.Tpo -c -o thread.o thread.c mv -f .deps/surfcluster.Tpo .deps/surfcluster.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT timer.o -MD -MP -MF .deps/timer.Tpo -c -o timer.o timer.c mv -f .deps/timer.Tpo .deps/timer.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT transform.o -MD -MP -MF .deps/transform.Tpo -c -o transform.o transform.c transform.c: In function ���TransformCopyVolGeomToMRI���: transform.c:330:14: warning: variable ���gcam��� set but not used [-Wunused-but-set-variable] GCA_MORPH *gcam ; ^ transform.c: In function ���readVolGeom���: transform.c:393:8: warning: variable ���fail��� set but not used [-Wunused-but-set-variable] int fail = 0; ^ transform.c: In function ���TransformSampleInverse���: transform.c:2684:19: warning: variable ���m_L_inv��� set but not used [-Wunused-but-set-variable] static MATRIX *m_L_inv ; ^ transform.c: In function ���TransformSampleInverseFloat���: transform.c:2776:19: warning: variable ���m_L_inv��� set but not used [-Wunused-but-set-variable] static MATRIX *m_L_inv ; ^ transform.c: In function ���mincFindVolume���: transform.c:3155:7: warning: variable ���mncorig��� set but not used [-Wunused-but-set-variable] int mncorig = 0; ^ transform.c: In function ���mincGetVolInfo���: transform.c:3367:7: warning: variable ���retVal��� set but not used [-Wunused-but-set-variable] int retVal; ^ transform.c: In function ���ltaReadFileEx���: transform.c:3548:15: warning: variable ���p��� set but not used [-Wunused-but-set-variable] char *p; ^ transform.c: In function ���LTAreduce���: transform.c:3926:9: warning: variable ���nx��� set but not used [-Wunused-but-set-variable] int n,nx,DoInv=0; ^ mv -f .deps/talairachex.Tpo .deps/talairachex.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tritri.o -MD -MP -MF .deps/tritri.Tpo -c -o tritri.o tritri.c mv -f .deps/thread.Tpo .deps/thread.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT tukey.o -MD -MP -MF .deps/tukey.Tpo -c -o tukey.o tukey.c tritri.c: In function ���triangle_ray_intersect���: tritri.c:362:62: warning: variable ���b��� set but not used [-Wunused-but-set-variable] double basis1[3], basis2[3], tmp[3], L0[3], L1[3], len, a, b, t, dot, ^ tritri.c:362:59: warning: variable ���a��� set but not used [-Wunused-but-set-variable] double basis1[3], basis2[3], tmp[3], L0[3], L1[3], len, a, b, t, dot, ^ mv -f .deps/tukey.Tpo .deps/tukey.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT utils.o -MD -MP -MF .deps/utils.Tpo -c -o utils.o utils.c mv -f .deps/tritri.Tpo .deps/tritri.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT version.o -MD -MP -MF .deps/version.Tpo -c -o version.o version.c mv -f .deps/version.Tpo .deps/version.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT volcluster.o -MD -MP -MF .deps/volcluster.Tpo -c -o volcluster.o volcluster.c mv -f .deps/utils.Tpo .deps/utils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT voxlist.o -MD -MP -MF .deps/voxlist.Tpo -c -o voxlist.o voxlist.c mv -f .deps/voxlist.Tpo .deps/voxlist.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT x3DList.o -MD -MP -MF .deps/x3DList.Tpo -c -o x3DList.o x3DList.c mv -f .deps/volcluster.Tpo .deps/volcluster.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xDebug.o -MD -MP -MF .deps/xDebug.Tpo -c -o xDebug.o xDebug.c mv -f .deps/x3DList.Tpo .deps/x3DList.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xGLutWindow.o -MD -MP -MF .deps/xGLutWindow.Tpo -c -o xGLutWindow.o xGLutWindow.c mv -f .deps/xDebug.Tpo .deps/xDebug.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xGrowableArray.o -MD -MP -MF .deps/xGrowableArray.Tpo -c -o xGrowableArray.o xGrowableArray.c mv -f .deps/xGrowableArray.Tpo .deps/xGrowableArray.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xSparseVolume.o -MD -MP -MF .deps/xSparseVolume.Tpo -c -o xSparseVolume.o xSparseVolume.c mv -f .deps/xList.Tpo .deps/xList.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xUndoList.o -MD -MP -MF .deps/xUndoList.Tpo -c -o xUndoList.o xUndoList.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xUtilities.o -MD -MP -MF .deps/xUtilities.Tpo -c -o xUtilities.o xUtilities.c mv -f .deps/transform.Tpo .deps/transform.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT xVoxel.o -MD -MP -MF .deps/xVoxel.Tpo -c -o xVoxel.o xVoxel.c mv -f .deps/xUtilities.Tpo .deps/xUtilities.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT znzlib.o -MD -MP -MF .deps/znzlib.Tpo -c -o znzlib.o znzlib.c mv -f .deps/xUndoList.Tpo .deps/xUndoList.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT fs_lbfgs.o -MD -MP -MF .deps/fs_lbfgs.Tpo -c -o fs_lbfgs.o fs_lbfgs.cpp mv -f .deps/znzlib.Tpo .deps/znzlib.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT fs_lbfgs_observer.o -MD -MP -MF .deps/fs_lbfgs_observer.Tpo -c -o fs_lbfgs_observer.o fs_lbfgs_observer.cpp mv -f .deps/fs_cost_function.Tpo .deps/fs_cost_function.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT fs_lbfgs_subject.o -MD -MP -MF .deps/fs_lbfgs_subject.Tpo -c -o fs_lbfgs_subject.o fs_lbfgs_subject.cpp mv -f .deps/fs_lbfgs_observer.Tpo .deps/fs_lbfgs_observer.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT fs_powell.o -MD -MP -MF .deps/fs_powell.Tpo -c -o fs_powell.o fs_powell.cpp mv -f .deps/fs_lbfgs.Tpo .deps/fs_lbfgs.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT mri_fastmarching.o -MD -MP -MF .deps/mri_fastmarching.Tpo -c -o mri_fastmarching.o mri_fastmarching.cpp mv -f .deps/fs_lbfgs_subject.Tpo .deps/fs_lbfgs_subject.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mriio_nrrd.o -MD -MP -MF .deps/mriio_nrrd.Tpo -c -o mriio_nrrd.o mriio_nrrd.c mv -f .deps/mriio_nrrd.Tpo .deps/mriio_nrrd.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT mriio_nrrd_itk.o -MD -MP -MF .deps/mriio_nrrd_itk.Tpo -c -o mriio_nrrd_itk.o mriio_nrrd_itk.cpp mv -f .deps/fs_powell.Tpo .deps/fs_powell.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT numerics.o -MD -MP -MF .deps/numerics.Tpo -c -o numerics.o numerics.cpp In file included from /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkImageHelper.h:20:0, from /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkImageBase.h:35, from /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkImage.h:20, from mriio_nrrd_itk.cpp:99: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h: In member function ���void itk::Concept::HasNumericTraits::Constraints::constraints()���: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:558:59: warning: typedef ���ValueType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::ValueType ValueType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:559:59: warning: typedef ���PrintType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::PrintType PrintType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:560:59: warning: typedef ���AbsType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::AbsType AbsType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:561:59: warning: typedef ���AccumulateType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::AccumulateType AccumulateType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:562:59: warning: typedef ���RealType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::RealType RealType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:563:59: warning: typedef ���ScalarRealType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::ScalarRealType ScalarRealType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:564:59: warning: typedef ���FloatType��� locally defined but not used [-Wunused-local-typedefs] typedef typename NumericTraits::FloatType FloatType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h: In member function ���void itk::Concept::HasPixelTraits::Constraints::constraints()���: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:591:50: warning: typedef ���ValueType��� locally defined but not used [-Wunused-local-typedefs] typedef typename PixelTraits::ValueType ValueType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h: In member function ���void itk::Concept::HasValueType::Constraints::constraints()���: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:608:37: warning: typedef ���ValueType��� locally defined but not used [-Wunused-local-typedefs] typedef typename T::ValueType ValueType; ^ /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h: In member function ���void itk::Concept::HasJoinTraits::Constraints::constraints()���: /home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common/itkConceptChecking.h:641:54: warning: typedef ���ValueType��� locally defined but not used [-Wunused-local-typedefs] typedef typename JoinTraits::ValueType ValueType; ^ mv -f .deps/numerics.Tpo .deps/numerics.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT chronometerpp.o -MD -MP -MF .deps/chronometerpp.Tpo -c -o chronometerpp.o chronometerpp.cpp mv -f .deps/chronometerpp.Tpo .deps/chronometerpp.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT gcamorphtestutils.o -MD -MP -MF .deps/gcamorphtestutils.Tpo -c -o gcamorphtestutils.o gcamorphtestutils.cpp mv -f .deps/mri_fastmarching.Tpo .deps/mri_fastmarching.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT gcautils.o -MD -MP -MF .deps/gcautils.Tpo -c -o gcautils.o gcautils.cpp mv -f .deps/gcautils.Tpo .deps/gcautils.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT gcalinearnode.o -MD -MP -MF .deps/gcalinearnode.Tpo -c -o gcalinearnode.o gcalinearnode.cpp mrisurf.c: In function ���MRISprintTessellationStats���: mrisurf.c:46396:3: warning: ���vno2��� may be used uninitialized in this function [-Wmaybe-uninitialized] fprintf(fp, "vertex spacing %2.2f +- %2.2f (%2.2f-->%2.2f) " ^ mrisurf.c:46409:9: warning: ���vno��� may be used uninitialized in this function [-Wmaybe-uninitialized] v = &mris->vertices[vno] ; ^ mv -f .deps/gcalinearnode.Tpo .deps/gcalinearnode.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT gcalinearprior.o -MD -MP -MF .deps/gcalinearprior.Tpo -c -o gcalinearprior.o gcalinearprior.cpp mrisurf.c: In function ���mrisTessellateDefect.isra.190���: mrisurf.c:65701:12: warning: assuming signed overflow does not occur when assuming that (X + c) < X is always false [-Wstrict-overflow] if (last_euthanasia+NEXT <= ngenerations) ^ mv -f .deps/mriio_nrrd_itk.Tpo .deps/mriio_nrrd_itk.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mris_compVolFrac.o -MD -MP -MF .deps/mris_compVolFrac.Tpo -c -o mris_compVolFrac.o mris_compVolFrac.c mris_compVolFrac.c: In function ���octTreeVoxelDivide���: mris_compVolFrac.c:211:3: warning: ���vox_new[2]��� may be used uninitialized in this function [-Wmaybe-uninitialized] return v; ^ mris_compVolFrac.c:216:10: note: ���vox_new[2]��� was declared here double vox_new[3]; ^ mris_compVolFrac.c:211:3: warning: ���vox_new[1]��� may be used uninitialized in this function [-Wmaybe-uninitialized] return v; ^ mris_compVolFrac.c:216:10: note: ���vox_new[1]��� was declared here double vox_new[3]; ^ mris_compVolFrac.c:211:3: warning: ���vox_new[0]��� may be used uninitialized in this function [-Wmaybe-uninitialized] return v; ^ mris_compVolFrac.c:216:10: note: ���vox_new[0]��� was declared here double vox_new[3]; ^ mv -f .deps/mris_compVolFrac.Tpo .deps/mris_compVolFrac.Po g++ -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DGCAMORPH_ON_GPU -DFS_CUDA -DCUDA_FORCE_SYNC -DCUDA_SHOW_TIMINGS -MT gcamcomputeLabelsLinearCPU.o -MD -MP -MF .deps/gcamcomputeLabelsLinearCPU.Tpo -c -o gcamcomputeLabelsLinearCPU.o gcamcomputeLabelsLinearCPU.cpp mv -f .deps/gcalinearprior.Tpo .deps/gcalinearprior.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT bdtr.o -MD -MP -MF .deps/bdtr.Tpo -c -o bdtr.o `test -f './cephes/bdtr.c' || echo './'`./cephes/bdtr.c mv -f .deps/bdtr.Tpo .deps/bdtr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT chdtr.o -MD -MP -MF .deps/chdtr.Tpo -c -o chdtr.o `test -f './cephes/chdtr.c' || echo './'`./cephes/chdtr.c mv -f .deps/chdtr.Tpo .deps/chdtr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT const.o -MD -MP -MF .deps/const.Tpo -c -o const.o `test -f './cephes/const.c' || echo './'`./cephes/const.c mv -f .deps/const.Tpo .deps/const.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT fdtr.o -MD -MP -MF .deps/fdtr.Tpo -c -o fdtr.o `test -f './cephes/fdtr.c' || echo './'`./cephes/fdtr.c mv -f .deps/gcamorphtestutils.Tpo .deps/gcamorphtestutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gamma.o -MD -MP -MF .deps/gamma.Tpo -c -o gamma.o `test -f './cephes/gamma.c' || echo './'`./cephes/gamma.c mv -f .deps/fdtr.Tpo .deps/fdtr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT igam.o -MD -MP -MF .deps/igam.Tpo -c -o igam.o `test -f './cephes/igam.c' || echo './'`./cephes/igam.c mv -f .deps/igam.Tpo .deps/igam.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT igami.o -MD -MP -MF .deps/igami.Tpo -c -o igami.o `test -f './cephes/igami.c' || echo './'`./cephes/igami.c mv -f .deps/gamma.Tpo .deps/gamma.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT incbet.o -MD -MP -MF .deps/incbet.Tpo -c -o incbet.o `test -f './cephes/incbet.c' || echo './'`./cephes/incbet.c mv -f .deps/igami.Tpo .deps/igami.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT incbi.o -MD -MP -MF .deps/incbi.Tpo -c -o incbi.o `test -f './cephes/incbi.c' || echo './'`./cephes/incbi.c mv -f .deps/incbet.Tpo .deps/incbet.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mtherr.o -MD -MP -MF .deps/mtherr.Tpo -c -o mtherr.o `test -f './cephes/mtherr.c' || echo './'`./cephes/mtherr.c mv -f .deps/gcamcomputeLabelsLinearCPU.Tpo .deps/gcamcomputeLabelsLinearCPU.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ndtr.o -MD -MP -MF .deps/ndtr.Tpo -c -o ndtr.o `test -f './cephes/ndtr.c' || echo './'`./cephes/ndtr.c mv -f .deps/mtherr.Tpo .deps/mtherr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT ndtri.o -MD -MP -MF .deps/ndtri.Tpo -c -o ndtri.o `test -f './cephes/ndtri.c' || echo './'`./cephes/ndtri.c mv -f .deps/incbi.Tpo .deps/incbi.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT polevl.o -MD -MP -MF .deps/polevl.Tpo -c -o polevl.o `test -f './cephes/polevl.c' || echo './'`./cephes/polevl.c mv -f .deps/ndtri.Tpo .deps/ndtri.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT stdtr.o -MD -MP -MF .deps/stdtr.Tpo -c -o stdtr.o `test -f './cephes/stdtr.c' || echo './'`./cephes/stdtr.c mv -f .deps/polevl.Tpo .deps/polevl.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT 754.o -MD -MP -MF .deps/754.Tpo -c -o 754.o `test -f './NrrdIO/754.c' || echo './'`./NrrdIO/754.c mv -f .deps/ndtr.Tpo .deps/ndtr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatPNG.o -MD -MP -MF .deps/formatPNG.Tpo -c -o formatPNG.o `test -f './NrrdIO/formatPNG.c' || echo './'`./NrrdIO/formatPNG.c mv -f .deps/stdtr.Tpo .deps/stdtr.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT accessors.o -MD -MP -MF .deps/accessors.Tpo -c -o accessors.o `test -f './NrrdIO/accessors.c' || echo './'`./NrrdIO/accessors.c mv -f .deps/formatPNG.Tpo .deps/formatPNG.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatPNM.o -MD -MP -MF .deps/formatPNM.Tpo -c -o formatPNM.o `test -f './NrrdIO/formatPNM.c' || echo './'`./NrrdIO/formatPNM.c mv -f .deps/754.Tpo .deps/754.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT array.o -MD -MP -MF .deps/array.Tpo -c -o array.o `test -f './NrrdIO/array.c' || echo './'`./NrrdIO/array.c mv -f .deps/formatPNM.Tpo .deps/formatPNM.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatText.o -MD -MP -MF .deps/formatText.Tpo -c -o formatText.o `test -f './NrrdIO/formatText.c' || echo './'`./NrrdIO/formatText.c mv -f .deps/formatText.Tpo .deps/formatText.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT arraysNrrd.o -MD -MP -MF .deps/arraysNrrd.Tpo -c -o arraysNrrd.o `test -f './NrrdIO/arraysNrrd.c' || echo './'`./NrrdIO/arraysNrrd.c mv -f .deps/array.Tpo .deps/array.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatVTK.o -MD -MP -MF .deps/formatVTK.Tpo -c -o formatVTK.o `test -f './NrrdIO/formatVTK.c' || echo './'`./NrrdIO/formatVTK.c mv -f .deps/arraysNrrd.Tpo .deps/arraysNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT axis.o -MD -MP -MF .deps/axis.Tpo -c -o axis.o `test -f './NrrdIO/axis.c' || echo './'`./NrrdIO/axis.c mv -f .deps/formatVTK.Tpo .deps/formatVTK.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT gzio.o -MD -MP -MF .deps/gzio.Tpo -c -o gzio.o `test -f './NrrdIO/gzio.c' || echo './'`./NrrdIO/gzio.c mv -f .deps/accessors.Tpo .deps/accessors.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT biffbiff.o -MD -MP -MF .deps/biffbiff.Tpo -c -o biffbiff.o `test -f './NrrdIO/biffbiff.c' || echo './'`./NrrdIO/biffbiff.c mv -f .deps/gzio.Tpo .deps/gzio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT keyvalue.o -MD -MP -MF .deps/keyvalue.Tpo -c -o keyvalue.o `test -f './NrrdIO/keyvalue.c' || echo './'`./NrrdIO/keyvalue.c mv -f .deps/keyvalue.Tpo .deps/keyvalue.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT comment.o -MD -MP -MF .deps/comment.Tpo -c -o comment.o `test -f './NrrdIO/comment.c' || echo './'`./NrrdIO/comment.c mv -f .deps/comment.Tpo .deps/comment.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT methodsNrrd.o -MD -MP -MF .deps/methodsNrrd.Tpo -c -o methodsNrrd.o `test -f './NrrdIO/methodsNrrd.c' || echo './'`./NrrdIO/methodsNrrd.c mv -f .deps/biffbiff.Tpo .deps/biffbiff.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT defaultsNrrd.o -MD -MP -MF .deps/defaultsNrrd.Tpo -c -o defaultsNrrd.o `test -f './NrrdIO/defaultsNrrd.c' || echo './'`./NrrdIO/defaultsNrrd.c mv -f .deps/defaultsNrrd.Tpo .deps/defaultsNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT miscAir.o -MD -MP -MF .deps/miscAir.Tpo -c -o miscAir.o `test -f './NrrdIO/miscAir.c' || echo './'`./NrrdIO/miscAir.c mv -f .deps/axis.Tpo .deps/axis.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT dio.o -MD -MP -MF .deps/dio.Tpo -c -o dio.o `test -f './NrrdIO/dio.c' || echo './'`./NrrdIO/dio.c mv -f .deps/miscAir.Tpo .deps/miscAir.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT mop.o -MD -MP -MF .deps/mop.Tpo -c -o mop.o `test -f './NrrdIO/mop.c' || echo './'`./NrrdIO/mop.c mv -f .deps/dio.Tpo .deps/dio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encodingAscii.o -MD -MP -MF .deps/encodingAscii.Tpo -c -o encodingAscii.o `test -f './NrrdIO/encodingAscii.c' || echo './'`./NrrdIO/encodingAscii.c mv -f .deps/encodingAscii.Tpo .deps/encodingAscii.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT parseAir.o -MD -MP -MF .deps/parseAir.Tpo -c -o parseAir.o `test -f './NrrdIO/parseAir.c' || echo './'`./NrrdIO/parseAir.c mv -f .deps/mop.Tpo .deps/mop.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encodingBzip2.o -MD -MP -MF .deps/encodingBzip2.Tpo -c -o encodingBzip2.o `test -f './NrrdIO/encodingBzip2.c' || echo './'`./NrrdIO/encodingBzip2.c mv -f .deps/methodsNrrd.Tpo .deps/methodsNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT parseNrrd.o -MD -MP -MF .deps/parseNrrd.Tpo -c -o parseNrrd.o `test -f './NrrdIO/parseNrrd.c' || echo './'`./NrrdIO/parseNrrd.c mv -f .deps/encodingBzip2.Tpo .deps/encodingBzip2.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encoding.o -MD -MP -MF .deps/encoding.Tpo -c -o encoding.o `test -f './NrrdIO/encoding.c' || echo './'`./NrrdIO/encoding.c mv -f .deps/parseAir.Tpo .deps/parseAir.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encodingGzip.o -MD -MP -MF .deps/encodingGzip.Tpo -c -o encodingGzip.o `test -f './NrrdIO/encodingGzip.c' || echo './'`./NrrdIO/encodingGzip.c mv -f .deps/encoding.Tpo .deps/encoding.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encodingHex.o -MD -MP -MF .deps/encodingHex.Tpo -c -o encodingHex.o `test -f './NrrdIO/encodingHex.c' || echo './'`./NrrdIO/encodingHex.c mv -f .deps/encodingGzip.Tpo .deps/encodingGzip.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT read.o -MD -MP -MF .deps/read.Tpo -c -o read.o `test -f './NrrdIO/read.c' || echo './'`./NrrdIO/read.c mv -f .deps/encodingHex.Tpo .deps/encodingHex.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT encodingRaw.o -MD -MP -MF .deps/encodingRaw.Tpo -c -o encodingRaw.o `test -f './NrrdIO/encodingRaw.c' || echo './'`./NrrdIO/encodingRaw.c mv -f .deps/encodingRaw.Tpo .deps/encodingRaw.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT reorder.o -MD -MP -MF .deps/reorder.Tpo -c -o reorder.o `test -f './NrrdIO/reorder.c' || echo './'`./NrrdIO/reorder.c mv -f .deps/read.Tpo .deps/read.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT endianAir.o -MD -MP -MF .deps/endianAir.Tpo -c -o endianAir.o `test -f './NrrdIO/endianAir.c' || echo './'`./NrrdIO/endianAir.c mv -f .deps/endianAir.Tpo .deps/endianAir.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT endianNrrd.o -MD -MP -MF .deps/endianNrrd.Tpo -c -o endianNrrd.o `test -f './NrrdIO/endianNrrd.c' || echo './'`./NrrdIO/endianNrrd.c mv -f .deps/parseNrrd.Tpo .deps/parseNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT sane.o -MD -MP -MF .deps/sane.Tpo -c -o sane.o `test -f './NrrdIO/sane.c' || echo './'`./NrrdIO/sane.c mv -f .deps/endianNrrd.Tpo .deps/endianNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT enum.o -MD -MP -MF .deps/enum.Tpo -c -o enum.o `test -f './NrrdIO/enum.c' || echo './'`./NrrdIO/enum.c mv -f .deps/sane.Tpo .deps/sane.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT simple.o -MD -MP -MF .deps/simple.Tpo -c -o simple.o `test -f './NrrdIO/simple.c' || echo './'`./NrrdIO/simple.c mv -f .deps/reorder.Tpo .deps/reorder.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT enumsNrrd.o -MD -MP -MF .deps/enumsNrrd.Tpo -c -o enumsNrrd.o `test -f './NrrdIO/enumsNrrd.c' || echo './'`./NrrdIO/enumsNrrd.c mv -f .deps/enumsNrrd.Tpo .deps/enumsNrrd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT string.o -MD -MP -MF .deps/string.Tpo -c -o string.o `test -f './NrrdIO/string.c' || echo './'`./NrrdIO/string.c mv -f .deps/enum.Tpo .deps/enum.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT format.o -MD -MP -MF .deps/format.Tpo -c -o format.o `test -f './NrrdIO/format.c' || echo './'`./NrrdIO/format.c mv -f .deps/format.Tpo .deps/format.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT subset.o -MD -MP -MF .deps/subset.Tpo -c -o subset.o `test -f './NrrdIO/subset.c' || echo './'`./NrrdIO/subset.c mv -f .deps/string.Tpo .deps/string.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatEPS.o -MD -MP -MF .deps/formatEPS.Tpo -c -o formatEPS.o `test -f './NrrdIO/formatEPS.c' || echo './'`./NrrdIO/formatEPS.c mv -f .deps/formatEPS.Tpo .deps/formatEPS.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT write.o -MD -MP -MF .deps/write.Tpo -c -o write.o `test -f './NrrdIO/write.c' || echo './'`./NrrdIO/write.c mv -f .deps/subset.Tpo .deps/subset.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -MT formatNRRD.o -MD -MP -MF .deps/formatNRRD.Tpo -c -o formatNRRD.o `test -f './NrrdIO/formatNRRD.c' || echo './'`./NrrdIO/formatNRRD.c mv -f .deps/simple.Tpo .deps/simple.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-afni.o -MD -MP -MF .deps/libutils_cuda_a-afni.Tpo -c -o libutils_cuda_a-afni.o `test -f 'afni.c' || echo './'`afni.c mv -f .deps/formatNRRD.Tpo .deps/formatNRRD.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-annotation.o -MD -MP -MF .deps/libutils_cuda_a-annotation.Tpo -c -o libutils_cuda_a-annotation.o `test -f 'annotation.c' || echo './'`annotation.c afni.c: In function ���afniRead���: afni.c:680:7: warning: variable ���bytes��� set but not used [-Wunused-but-set-variable] int bytes; ^ mv -f .deps/write.Tpo .deps/write.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-art1.o -MD -MP -MF .deps/libutils_cuda_a-art1.Tpo -c -o libutils_cuda_a-art1.o `test -f 'art1.c' || echo './'`art1.c annotation.c: In function ���MRISdivideAnnotationUnit���: annotation.c:479:41: warning: variable ���mx��� set but not used [-Wunused-but-set-variable] min_dot, max_dot, e1x, e1y, e1z, dot, mx ; ^ annotation.c: In function ���MRISmergeAnnotations���: annotation.c:624:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ art1.c: In function ���Art1Process���: art1.c:254:11: warning: variable ���nclass��� set but not used [-Wunused-but-set-variable] int nclass, i, class ; ^ art1.c: In function ���artFeedForward���: art1.c:372:11: warning: variable ���f2��� set but not used [-Wunused-but-set-variable] double f2, max_out ; ^ art1.c: In function ���artFastLearn���: art1.c:469:11: warning: variable ���norm_I_int_zj��� set but not used [-Wunused-but-set-variable] double norm_I_int_zj ; ^ mv -f .deps/libutils_cuda_a-art1.Tpo .deps/libutils_cuda_a-art1.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-artmap.o -MD -MP -MF .deps/libutils_cuda_a-artmap.Tpo -c -o libutils_cuda_a-artmap.o `test -f 'artmap.c' || echo './'`artmap.c artmap.c: In function ���artFeedForward���: artmap.c:465:11: warning: variable ���f2��� set but not used [-Wunused-but-set-variable] double f2, max_out ; ^ artmap.c: In function ���artFastLearn���: artmap.c:568:11: warning: variable ���norm_I_int_zj��� set but not used [-Wunused-but-set-variable] double norm_I_int_zj ; ^ mv -f .deps/libutils_cuda_a-afni.Tpo .deps/libutils_cuda_a-afni.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-aseg_edit_svm.o -MD -MP -MF .deps/libutils_cuda_a-aseg_edit_svm.Tpo -c -o libutils_cuda_a-aseg_edit_svm.o `test -f 'aseg_edit_svm.c' || echo './'`aseg_edit_svm.c mv -f .deps/libutils_cuda_a-annotation.Tpo .deps/libutils_cuda_a-annotation.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-autoencoder.o -MD -MP -MF .deps/libutils_cuda_a-autoencoder.Tpo -c -o libutils_cuda_a-autoencoder.o `test -f 'autoencoder.c' || echo './'`autoencoder.c autoencoder.c: In function ���AEalloc���: autoencoder.c:211:16: warning: variable ���f1��� set but not used [-Wunused-but-set-variable] double f0, f1 ; ^ autoencoder.c:211:12: warning: variable ���f0��� set but not used [-Wunused-but-set-variable] double f0, f1 ; ^ autoencoder.c: In function ���SAEcomputeRMS���: autoencoder.c:409:11: warning: variable ���v_output��� set but not used [-Wunused-but-set-variable] VECTOR *v_output ; ^ autoencoder.c: In function ���SAEtrainFromMRI���: autoencoder.c:535:14: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:535:10: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:591:31: warning: variable ���init_total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:20: warning: variable ���total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:15: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:591:11: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:467:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma ; ^ autoencoder.c: In function ���SAEtrainFromVoxlist���: autoencoder.c:694:12: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:694:8: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out ; ^ autoencoder.c:750:31: warning: variable ���init_total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:20: warning: variable ���total_rms��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:15: warning: variable ���out��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:750:11: warning: variable ���in��� set but not used [-Wunused-but-set-variable] float in, out, total_rms, init_total_rms ; ^ autoencoder.c:632:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma ; ^ autoencoder.c: In function ���aeApplyAccumulatedGradient���: autoencoder.c:1068:29: warning: variable ���orig_dt��� set but not used [-Wunused-but-set-variable] double beta, best_dt, orig_dt, rms, best_rms ; ^ autoencoder.c:1024:19: warning: variable ���nhidden��� set but not used [-Wunused-but-set-variable] int ninputs, nhidden, noutputs ; ^ autoencoder.c:1024:10: warning: variable ���ninputs��� set but not used [-Wunused-but-set-variable] int ninputs, nhidden, noutputs ; ^ mv -f .deps/libutils_cuda_a-aseg_edit_svm.Tpo .deps/libutils_cuda_a-aseg_edit_svm.Po autoencoder.c: In function ���AEtrain���: autoencoder.c:1416:29: warning: variable ���orig_dt��� set but not used [-Wunused-but-set-variable] double beta, best_dt, orig_dt, rms, best_rms ; ^ autoencoder.c: In function ���SAEwrite���: autoencoder.c:1628:12: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int i, n ; ^ autoencoder.c: In function ���SAEread���: autoencoder.c:1689:45: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int whalf, nencoders, i, type, nlevels, n ; ^ gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-backprop.o -MD -MP -MF .deps/libutils_cuda_a-backprop.Tpo -c -o libutils_cuda_a-backprop.o `test -f 'backprop.c' || echo './'`backprop.c autoencoder.c: In function ���CSAEcreateOutputs���: autoencoder.c:1853:29: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int layer, x, y, z, h, whalf ; ^ autoencoder.c: In function ���CSAEaddLayer���: autoencoder.c:1889:9: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ autoencoder.c: In function ���CSAEtrainLayerFromVoxlist���: autoencoder.c:1907:10: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, acceptance_sigma, proposal_sigma, tol, min_rms ; ^ autoencoder.c: In function ���CSAElayerWeightsToMRI���: autoencoder.c:2054:15: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, whalf, whalf_prev, x, y, xk, yk, v, h, count, xp, yp,hp ; ^ mv -f .deps/libutils_cuda_a-artmap.Tpo .deps/libutils_cuda_a-artmap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-bfileio.o -MD -MP -MF .deps/libutils_cuda_a-bfileio.Tpo -c -o libutils_cuda_a-bfileio.o `test -f 'bfileio.c' || echo './'`bfileio.c backprop.c: In function ���BackpropTrainEpoch���: backprop.c:798:32: warning: variable ���error_ratio��� set but not used [-Wunused-but-set-variable] float *inputs, *targets, error_ratio ; ^ backprop.c: In function ���BackpropLearn���: backprop.c:920:11: warning: variable ���bpClass��� set but not used [-Wunused-but-set-variable] int bpClass, i ; ^ backprop.c: In function ���BackpropError���: backprop.c:1259:19: warning: variable ���total��� set but not used [-Wunused-but-set-variable] float bpError, total, error ; ^ mv -f .deps/libutils_cuda_a-backprop.Tpo .deps/libutils_cuda_a-backprop.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-box.o -MD -MP -MF .deps/libutils_cuda_a-box.Tpo -c -o libutils_cuda_a-box.o `test -f 'box.c' || echo './'`box.c mv -f .deps/libutils_cuda_a-box.Tpo .deps/libutils_cuda_a-box.Po mv -f .deps/libutils_cuda_a-bfileio.Tpo .deps/libutils_cuda_a-bfileio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-Bruker.o -MD -MP -MF .deps/libutils_cuda_a-Bruker.Tpo -c -o libutils_cuda_a-Bruker.o `test -f 'Bruker.c' || echo './'`Bruker.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-chklc.o -MD -MP -MF .deps/libutils_cuda_a-chklc.Tpo -c -o libutils_cuda_a-chklc.o `test -f 'chklc.c' || echo './'`chklc.c Bruker.c: In function ���readBrukerD3proc���: Bruker.c:336:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead; ^ Bruker.c: In function ���readBrukerAcqp���: Bruker.c:534:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead=0; ^ Bruker.c: In function ���readBrukerReco���: Bruker.c:668:7: warning: variable ���lRead��� set but not used [-Wunused-but-set-variable] int lRead=0; ^ Bruker.c: In function ���readBrukerVolume���: Bruker.c:800:7: warning: variable ���size��� set but not used [-Wunused-but-set-variable] int size; ^ mv -f .deps/libutils_cuda_a-chklc.Tpo .deps/libutils_cuda_a-chklc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-chronometer.o -MD -MP -MF .deps/libutils_cuda_a-chronometer.Tpo -c -o libutils_cuda_a-chronometer.o `test -f 'chronometer.c' || echo './'`chronometer.c mv -f .deps/libutils_cuda_a-chronometer.Tpo .deps/libutils_cuda_a-chronometer.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-cluster.o -MD -MP -MF .deps/libutils_cuda_a-cluster.Tpo -c -o libutils_cuda_a-cluster.o `test -f 'cluster.c' || echo './'`cluster.c mv -f .deps/libutils_cuda_a-Bruker.Tpo .deps/libutils_cuda_a-Bruker.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-class_array.o -MD -MP -MF .deps/libutils_cuda_a-class_array.Tpo -c -o libutils_cuda_a-class_array.o `test -f 'class_array.c' || echo './'`class_array.c mv -f .deps/libutils_cuda_a-cluster.Tpo .deps/libutils_cuda_a-cluster.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-cma.o -MD -MP -MF .deps/libutils_cuda_a-cma.Tpo -c -o libutils_cuda_a-cma.o `test -f 'cma.c' || echo './'`cma.c mv -f .deps/libutils_cuda_a-autoencoder.Tpo .deps/libutils_cuda_a-autoencoder.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-cmat.o -MD -MP -MF .deps/libutils_cuda_a-cmat.Tpo -c -o libutils_cuda_a-cmat.o `test -f 'cmat.c' || echo './'`cmat.c mv -f .deps/libutils_cuda_a-cmat.Tpo .deps/libutils_cuda_a-cmat.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-cmdargs.o -MD -MP -MF .deps/libutils_cuda_a-cmdargs.Tpo -c -o libutils_cuda_a-cmdargs.o `test -f 'cmdargs.c' || echo './'`cmdargs.c mv -f .deps/libutils_cuda_a-class_array.Tpo .deps/libutils_cuda_a-class_array.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 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-I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-colortab.o -MD -MP -MF .deps/libutils_cuda_a-colortab.Tpo -c -o libutils_cuda_a-colortab.o `test -f 'colortab.c' || echo './'`colortab.c mv -f .deps/libutils_cuda_a-cmdargs.Tpo .deps/libutils_cuda_a-cmdargs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-connectcomp.o -MD -MP -MF .deps/libutils_cuda_a-connectcomp.Tpo -c -o libutils_cuda_a-connectcomp.o `test -f 'connectcomp.c' || echo './'`connectcomp.c colortab.c: In function ���CTABfindEntryByName���: colortab.c:1862:11: warning: the comparison will always evaluate as ���false��� for the address of ���index��� will never be NULL [-Waddress] if (NULL==index) ^ mv -f .deps/libutils_cuda_a-cma.Tpo .deps/libutils_cuda_a-cma.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-corio.o -MD -MP -MF .deps/libutils_cuda_a-corio.Tpo -c -o libutils_cuda_a-corio.o `test -f 'corio.c' || echo './'`corio.c mv -f .deps/libutils_cuda_a-corio.Tpo .deps/libutils_cuda_a-corio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ctrpoints.o -MD -MP -MF .deps/libutils_cuda_a-ctrpoints.Tpo -c -o libutils_cuda_a-ctrpoints.o `test -f 'ctrpoints.c' || echo './'`ctrpoints.c ctrpoints.c: In function ���MRIreadControlPoints���: ctrpoints.c:46:7: warning: variable ���numpoints��� set but not used [-Wunused-but-set-variable] int numpoints; ^ mv -f .deps/libutils_cuda_a-ctrpoints.Tpo .deps/libutils_cuda_a-ctrpoints.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-cvector.o -MD -MP -MF .deps/libutils_cuda_a-cvector.Tpo -c -o libutils_cuda_a-cvector.o `test -f 'cvector.c' || echo './'`cvector.c mv -f .deps/libutils_cuda_a-connectcomp.Tpo .deps/libutils_cuda_a-connectcomp.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-dcdflib.o -MD -MP -MF .deps/libutils_cuda_a-dcdflib.Tpo -c -o libutils_cuda_a-dcdflib.o `test -f 'dcdflib.c' || echo './'`dcdflib.c mv -f .deps/libutils_cuda_a-colortab.Tpo .deps/libutils_cuda_a-colortab.Po dcdflib.c: In function ���E0000���: dcdflib.c:6473:58: warning: variable ���qok��� set but not used [-Wunused-but-set-variable] static unsigned long qbdd,qcond,qdum1,qdum2,qincr,qlim,qok,qup; ^ gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-dct.o -MD -MP -MF .deps/libutils_cuda_a-dct.Tpo -c -o libutils_cuda_a-dct.o `test -f 'dct.c' || echo './'`dct.c mv -f .deps/libutils_cuda_a-cvector.Tpo .deps/libutils_cuda_a-cvector.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-density.o -MD -MP -MF .deps/libutils_cuda_a-density.Tpo -c -o libutils_cuda_a-density.o `test -f 'density.c' || echo './'`density.c mv -f .deps/libutils_cuda_a-dct.Tpo .deps/libutils_cuda_a-dct.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-diag.o -MD -MP -MF .deps/libutils_cuda_a-diag.Tpo -c -o libutils_cuda_a-diag.o `test -f 'diag.c' || echo './'`diag.c diag.c: In function ���DiagDrawBox���: diag.c:220:7: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int i; ^ mv -f .deps/libutils_cuda_a-diag.Tpo .deps/libutils_cuda_a-diag.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-DICOMRead.o -MD -MP -MF .deps/libutils_cuda_a-DICOMRead.Tpo -c -o libutils_cuda_a-DICOMRead.o `test -f 'DICOMRead.c' || echo './'`DICOMRead.c mv -f .deps/libutils_cuda_a-density.Tpo .deps/libutils_cuda_a-density.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-diffuse.o -MD -MP -MF .deps/libutils_cuda_a-diffuse.Tpo -c -o libutils_cuda_a-diffuse.o `test -f 'diffuse.c' || echo './'`diffuse.c DICOMRead.c: In function ���sdcmLoadVolumeAutoScale���: DICOMRead.c:583:15: warning: variable ���nthdir��� set but not used [-Wunused-but-set-variable] int nnlist, nthdir; ^ DICOMRead.c: In function ���sdfiAssignRunNo���: DICOMRead.c:3715:9: warning: variable ���tmpstr��� set but not used [-Wunused-but-set-variable] char *tmpstr; ^ DICOMRead.c: In function ���DICOMRead2���: DICOMRead.c:5919:37: warning: variable ���nvox��� set but not used [-Wunused-but-set-variable] int ndcmfiles, nthfile, mritype=0,nvox,IsDWI,IsPhilipsDWI; ^ DICOMRead.c: In function ���DICOMInfo2MRI���: DICOMRead.c:6915:11: warning: variable ���nvox��� set but not used [-Wunused-but-set-variable] long n, nvox; ^ DICOMRead.c: In function ���DICOMRead���: DICOMRead.c:6996:7: warning: variable ���inputImageNumber��� set but not used [-Wunused-but-set-variable] int inputImageNumber; ^ DICOMRead.c:6987:55: warning: variable ���error��� set but not used [-Wunused-but-set-variable] int i, NumberOfFiles, NumberOfDICOMFiles, nStudies, error; ^ mv -f .deps/libutils_cuda_a-diffuse.Tpo .deps/libutils_cuda_a-diffuse.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-dti.o -MD -MP -MF .deps/libutils_cuda_a-dti.Tpo -c -o libutils_cuda_a-dti.o `test -f 'dti.c' || echo './'`dti.c mv -f .deps/libutils_cuda_a-dti.Tpo .deps/libutils_cuda_a-dti.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-dtk.fs.o -MD -MP -MF .deps/libutils_cuda_a-dtk.fs.Tpo -c -o libutils_cuda_a-dtk.fs.o `test -f 'dtk.fs.c' || echo './'`dtk.fs.c mv -f .deps/libutils_cuda_a-dtk.fs.Tpo .deps/libutils_cuda_a-dtk.fs.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-error.o -MD -MP -MF .deps/libutils_cuda_a-error.Tpo -c -o libutils_cuda_a-error.o `test -f 'error.c' || echo './'`error.c mv -f .deps/libutils_cuda_a-error.Tpo .deps/libutils_cuda_a-error.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-evschutils.o -MD -MP -MF .deps/libutils_cuda_a-evschutils.Tpo -c -o libutils_cuda_a-evschutils.o `test -f 'evschutils.c' || echo './'`evschutils.c evschutils.c: In function ���EVSdesignMtxStats���: evschutils.c:850:21: warning: variable ���nNuisAvgs��� set but not used [-Wunused-but-set-variable] int r,m,nTaskAvgs,nNuisAvgs,nAvgs,Cfree,J; ^ mv -f .deps/libutils_cuda_a-dcdflib.Tpo .deps/libutils_cuda_a-dcdflib.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fcd.o -MD -MP -MF .deps/libutils_cuda_a-fcd.Tpo -c -o libutils_cuda_a-fcd.o `test -f 'fcd.c' || echo './'`fcd.c mv -f .deps/libutils_cuda_a-fcd.Tpo .deps/libutils_cuda_a-fcd.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fftutils.o -MD -MP -MF .deps/libutils_cuda_a-fftutils.Tpo -c -o libutils_cuda_a-fftutils.o `test -f 'fftutils.c' || echo './'`fftutils.c mv -f .deps/libutils_cuda_a-evschutils.Tpo .deps/libutils_cuda_a-evschutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-field_code.o -MD -MP -MF .deps/libutils_cuda_a-field_code.Tpo -c -o libutils_cuda_a-field_code.o `test -f 'field_code.c' || echo './'`field_code.c mv -f .deps/libutils_cuda_a-field_code.Tpo .deps/libutils_cuda_a-field_code.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-filter.o -MD -MP -MF .deps/libutils_cuda_a-filter.Tpo -c -o libutils_cuda_a-filter.o `test -f 'filter.c' || echo './'`filter.c filter.c: In function ���ImageCorrelateRegion���: filter.c:2448:31: warning: variable ���colend��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:21: warning: variable ���colstart��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:13: warning: variable ���rowend��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ filter.c:2448:3: warning: variable ���rowstart��� set but not used [-Wunused-but-set-variable] rowstart, rowend, colstart, colend, krow, kcol, drow,dcol ; ^ mv -f .deps/libutils_cuda_a-DICOMRead.Tpo .deps/libutils_cuda_a-DICOMRead.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fio.o -MD -MP -MF .deps/libutils_cuda_a-fio.Tpo -c -o libutils_cuda_a-fio.o `test -f 'fio.c' || echo './'`fio.c fio.c: In function ���freadInt���: fio.c:204:11: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int i, nread ; ^ fio.c: In function ���freadLong���: fio.c:215:8: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int nread ; ^ fio.c: In function ���znzreadInt���: fio.c:477:11: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int i, nread ; ^ fio.c: In function ���znzreadLong���: fio.c:489:8: warning: variable ���nread��� set but not used [-Wunused-but-set-variable] int nread ; ^ mv -f .deps/libutils_cuda_a-fftutils.Tpo .deps/libutils_cuda_a-fftutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-flash.o -MD -MP -MF .deps/libutils_cuda_a-flash.Tpo -c -o libutils_cuda_a-flash.o `test -f 'flash.c' || echo './'`flash.c flash.c: In function ���compute_T1_PD���: flash.c:166:56: warning: variable ���best_sse��� set but not used [-Wunused-but-set-variable] double best_T1, best_PD, norm_im, norm_pred, sse, best_sse, T1, ^ mv -f .deps/libutils_cuda_a-fio.Tpo .deps/libutils_cuda_a-fio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fmarchmesh.o -MD -MP -MF .deps/libutils_cuda_a-fmarchmesh.Tpo -c -o libutils_cuda_a-fmarchmesh.o `test -f 'fmarchmesh.c' || echo './'`fmarchmesh.c mv -f .deps/libutils_cuda_a-flash.Tpo .deps/libutils_cuda_a-flash.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fmriutils.o -MD -MP -MF .deps/libutils_cuda_a-fmriutils.Tpo -c -o libutils_cuda_a-fmriutils.o `test -f 'fmriutils.c' || echo './'`fmriutils.c mv -f .deps/libutils_cuda_a-fmarchmesh.Tpo .deps/libutils_cuda_a-fmarchmesh.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fsenv.o -MD -MP -MF .deps/libutils_cuda_a-fsenv.Tpo -c -o libutils_cuda_a-fsenv.o `test -f 'fsenv.c' || echo './'`fsenv.c mv -f .deps/libutils_cuda_a-fsenv.Tpo .deps/libutils_cuda_a-fsenv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fsglm.o -MD -MP -MF .deps/libutils_cuda_a-fsglm.Tpo -c -o libutils_cuda_a-fsglm.o `test -f 'fsglm.c' || echo './'`fsglm.c mv -f .deps/libutils_cuda_a-filter.Tpo .deps/libutils_cuda_a-filter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fsPrintHelp.o -MD -MP -MF .deps/libutils_cuda_a-fsPrintHelp.Tpo -c -o libutils_cuda_a-fsPrintHelp.o `test -f 'fsPrintHelp.c' || echo './'`fsPrintHelp.c mv -f .deps/libutils_cuda_a-fsglm.Tpo .deps/libutils_cuda_a-fsglm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-fsinit.o -MD -MP -MF .deps/libutils_cuda_a-fsinit.Tpo -c -o libutils_cuda_a-fsinit.o `test -f 'fsinit.c' || echo './'`fsinit.c fsinit.c: In function ���FSinit���: fsinit.c:13:9: warning: variable ���cp��� set but not used [-Wunused-but-set-variable] char *cp ; ^ mv -f .deps/libutils_cuda_a-fsinit.Tpo .deps/libutils_cuda_a-fsinit.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gcaboundary.o -MD -MP -MF .deps/libutils_cuda_a-gcaboundary.Tpo -c -o libutils_cuda_a-gcaboundary.o `test -f 'gcaboundary.c' || echo './'`gcaboundary.c mv -f .deps/libutils_cuda_a-fsPrintHelp.Tpo .deps/libutils_cuda_a-fsPrintHelp.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gca.o -MD -MP -MF .deps/libutils_cuda_a-gca.Tpo -c -o libutils_cuda_a-gca.o `test -f 'gca.c' || echo './'`gca.c gcaboundary.c: In function ���GCABgetProbability���: gcaboundary.c:226:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:225:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:225:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:225:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:224:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:224:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:224:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPin���: gcaboundary.c:426:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:425:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:425:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:425:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:424:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:424:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:424:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPout���: gcaboundary.c:626:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:625:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:625:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:625:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:624:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:624:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:624:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABgetPgrad���: gcaboundary.c:826:31: warning: variable ���pI_total��� set but not used [-Wunused-but-set-variable] double grad, p, pdelI, mag, pI_total, val1, val2, pI_in, pI_out, ^ gcaboundary.c:825:40: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:825:36: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:825:32: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, oob, xb, yb, zb, xu, yu, zu, x, y, z, num ; ^ gcaboundary.c:824:18: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:824:14: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c:824:10: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] xd, yd, zd, xi0, yi0, zi0, d, dx, dy, dz, xo0, yo0, zo0 ; ^ gcaboundary.c: In function ���GCABwrite���: gcaboundary.c:1126:9: warning: variable ���where��� set but not used [-Wunused-but-set-variable] long where ; ^ gcaboundary.c: In function ���GCABread���: gcaboundary.c:1217:11: warning: variable ���where��� set but not used [-Wunused-but-set-variable] long where ; ^ gcaboundary.c:1212:75: warning: variable ���nvertices��� set but not used [-Wunused-but-set-variable] int x, y, z, vno, i1, i2, spacing, ico_order, nibins, ngbins, label, nvertices ; ^ gcaboundary.c: In function ���gcabUpdateDistributions���: gcaboundary.c:1297:42: warning: variable ���zu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1297:38: warning: variable ���yu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1297:34: warning: variable ���xu��� set but not used [-Wunused-but-set-variable] int vno, label, xb, yb, zb, xu, yu, zu ; ^ gcaboundary.c:1295:54: warning: variable ���zd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c:1295:50: warning: variable ���yd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c:1295:46: warning: variable ���xd��� set but not used [-Wunused-but-set-variable] float nx, ny, nz, xi, yi, zi, xo, yo, zo, xd, yd, zd, dx, dy, dz, d, xi0, yi0, zi0, ^ gcaboundary.c: In function ���gcabUpdateNodeIout���: gcaboundary.c:1406:15: warning: variable ���i2u��� set but not used [-Wunused-but-set-variable] int i2b, i2u ; ^ gcaboundary.c:1405:20: warning: variable ���i2d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i2d, gbinf ; ^ gcaboundary.c: In function ���gcabUpdateNodeIin���: gcaboundary.c:1448:15: warning: variable ���i1u��� set but not used [-Wunused-but-set-variable] int i1b, i1u ; ^ gcaboundary.c:1447:20: warning: variable ���i1d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, gbinf ; ^ gcaboundary.c: In function ���gcabUpdateNode���: gcaboundary.c:1491:37: warning: variable ���gbinu��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1491:25: warning: variable ���i2u��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1491:20: warning: variable ���i1u��� set but not used [-Wunused-but-set-variable] int i1b, i2b, i1u, i2u, gbinb, gbinu ; ^ gcaboundary.c:1490:37: warning: variable ���gbind��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c:1490:25: warning: variable ���i2d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c:1490:20: warning: variable ���i1d��� set but not used [-Wunused-but-set-variable] float i1f, i2f, i1d, i2d, gbinf, gbind ; ^ gcaboundary.c: In function ���gcabSmoothPDF���: gcaboundary.c:1718:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ gcaboundary.c:1718:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ gcaboundary.c:1718:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, klen ; ^ gca.c: In function ���GCAgetPriorToSourceVoxelMatrix���: gca.c:1698:50: warning: variable ���m_voxsize��� set but not used [-Wunused-but-set-variable] MATRIX *m_prior2voxel, *m_prior2source_voxel, *m_voxsize, *m_tmp ; ^ gca.c: In function ���GCAread���: gca.c:2936:40: warning: variable ���prior_depth��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c:2936:26: warning: variable ���prior_height��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c:2936:13: warning: variable ���prior_width��� set but not used [-Wunused-but-set-variable] prior_width, prior_height, prior_depth, ^ gca.c: In function ���GCAcompleteMeanTraining���: gca.c:3824:21: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int r, i ; ^ gca.c: In function ���GCAcompleteCovarianceTraining���: gca.c:3868:25: warning: variable ���holes_filled��� set but not used [-Wunused-but-set-variable] int x, y, z, n, holes_filled, r, c,v, nregs = 0, nsamples ; ^ gca.c: In function ���GCAlabel���: gca.c:4121:21: warning: variable ���max_gc��� set but not used [-Wunused-but-set-variable] GC1D *gc, *max_gc ; ^ gca.c:4117:25: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int y, z, n, label, max_n, xn, yn, zn ; ^ gca.c: In function ���GCAlabelProbabilities���: gca.c:4325:16: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c:4322:15: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int y, z, label, xn, yn, zn, n ; ^ gca.c: In function ���GCAcomputeProbabilities���: gca.c:4483:14: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c: In function ���GCAclassify���: gca.c:4884:14: warning: variable ���max_p��� set but not used [-Wunused-but-set-variable] float max_p, p, total_p ; ^ gca.c:4883:15: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c: In function ���GCAremoveOutlyingSamples���: gca.c:5000:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5000:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5000:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c: In function ���GCAnormalizedLogSampleProbability���: gca.c:5079:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5079:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c:5079:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, ^ gca.c: In function ���GCAcomputeLogSampleProbabilityLongitudinal���: gca.c:5294:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:5294:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:5294:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c: In function ���GCAcomputeLogSampleProbabilityUsingCoords���: gca.c:5406:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c:5406:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c:5406:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xp, yp, zp, ^ gca.c: In function ���GCAtransformSamples���: gca.c:5637:14: warning: variable ���gc��� set but not used [-Wunused-but-set-variable] GC1D *gc ; ^ gca.c:5634:20: warning: variable ���min_v��� set but not used [-Wunused-but-set-variable] float max_p, min_v, vscale, min_y, prior ; ^ gca.c: In function ���GCAfindStableSamples���: gca.c:6421:9: warning: variable ���best_mean_dist��� set but not used [-Wunused-but-set-variable] float best_mean_dist; ^ gca.c: In function ���gcaFindBestSample���: gca.c:7428:25: warning: variable ���min_var��� set but not used [-Wunused-but-set-variable] float max_prior, min_var, prior ; ^ gca.c:7425:14: warning: variable ���best_n��� set but not used [-Wunused-but-set-variable] best_n, best_x, best_y, best_z, xn, yn, zn, r, c, v ; ^ gca.c: In function ���GCAtransformAndWriteSampleMeans���: gca.c:7794:14: warning: variable ���gcap��� set but not used [-Wunused-but-set-variable] GCA_PRIOR *gcap ; ^ gca.c: In function ���GCAanneal���: gca.c:8467:50: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, label, val, iter, ^ gca.c: In function ���GCAreclassifyUsingGibbsPriors���: gca.c:8854:16: warning: variable ���val��� set but not used [-Wunused-but-set-variable] float val ; ^ gca.c: In function ���GCAexpandVentricle���: gca.c:10260:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c:10257:46: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c:10257:38: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c:10257:31: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int nchanged, x, y, z, width, height, depth, xn, yn, zn, xk, yk, zk, ^ gca.c: In function ���GCAexpandCortex���: gca.c:10672:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAnormalizeSamples���: gca.c:11222:63: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] float wm_means[MAX_GCA_INPUTS], tmp[MAX_GCA_INPUTS], max_wm ; ^ gca.c: In function ���GCAlabelProbability���: gca.c:12250:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCArelabel_cortical_gray_and_white���: gca.c:13835:13: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���gcaExtractThresholdedRegionLabelAsSamples���: gca.c:14202:33: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c:14202:25: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c:14202:18: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int i, width, height, depth, x, y, z, ^ gca.c: In function ���GCAhistoScaleImageIntensities���: gca.c:15973:38: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] scales[MAX_GCA_INPUTS], max_wm/*, scale*/ ; ^ gca.c: In function ���GCAhistoScaleImageIntensitiesLongitudinal���: gca.c:16252:38: warning: variable ���max_wm��� set but not used [-Wunused-but-set-variable] scales[MAX_GCA_INPUTS], max_wm/*, scale*/ ; ^ gca.c: In function ���GCAfindAllSamples���: gca.c:16957:14: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] max_n, max_label, nsamples, r, c, v ; ^ gca.c:16956:48: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, n, label, i, ^ gca.c: In function ���GCAmapRenormalizeWithHistograms���: gca.c:21035:27: warning: variable ���upper_thresh��� set but not used [-Wunused-but-set-variable] lower_thresh, upper_thresh ; ^ gca.c:21035:13: warning: variable ���lower_thresh��� set but not used [-Wunused-but-set-variable] lower_thresh, upper_thresh ; ^ gca.c: In function ���GCAapplyRenormalization���: gca.c:24034:16: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c:24029:45: warning: variable ���scales��� set but not used [-Wunused-but-set-variable] means_after[MAX_GCA_LABELS], scales[MAX_GCA_LABELS]; ^ gca.c: In function ���GCAmapRenormalize���: gca.c:24446:18: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c: In function ���GCAmapRenormalizeByClass���: gca.c:24949:18: warning: variable ���labels��� set but not used [-Wunused-but-set-variable] int labels[MAX_GCA_LABELS], niter ; ^ gca.c:24633:45: warning: variable ���label��� set but not used [-Wunused-but-set-variable] xn, yn, zn, num, frame, bin, n, label, c, max_label ; ^ gca.c: In function ���GCArelabelNonbrain���: gca.c:25076:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAbuildMostLikelyLabelVolume���: gca.c:26637:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAbuildMostLikelyLabelProbabilityVolume���: gca.c:26731:13: warning: variable ���max_label��� set but not used [-Wunused-but-set-variable] int max_label ; ^ gca.c:26727:14: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gca.c: In function ���GCAcomputeLabelMeansAndCovariances���: gca.c:26804:12: warning: variable ���var��� set but not used [-Wunused-but-set-variable] double var, dof, total_dof ; ^ gca.c: In function ���GCAlabelWMandWMSAs���: gca.c:26907:67: warning: variable ���m_I��� set but not used [-Wunused-but-set-variable] MATRIX *m_cov_wm, *m_cov_wmsa, *m_inv_cov_wmsa, *m_inv_cov_wm, *m_I, ^ gca.c: In function ���GCAcomputeMeanEntropy���: gca.c:28283:44: warning: variable ���max_c��� set but not used [-Wunused-but-set-variable] int x, y, z, c, xn, yn, zn, num, max_c ; ^ gca.c: In function ���GCAreclassifyUnlikelyVoxels���: gca.c:29349:30: warning: variable ���d_new��� set but not used [-Wunused-but-set-variable] double p, max_p, d_old, d_new ; ^ gca.c:29348:66: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int xp, yp, zp, xn, yn, zn, width, height, depth, label, max_n, n ; ^ gca.c:29346:27: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan_total, *gcan ; ^ gca.c: In function ���GCAreclassifyVoxelsAtOptimalScale���: gca.c:29696:66: warning: variable ���max_n��� set but not used [-Wunused-but-set-variable] int xp, yp, zp, xn, yn, zn, width, height, depth, label, max_n, n ; ^ gca.c: In function ���GCAsourceVoxelToPriorReal���: gca.c:30165:11: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int retval ; ^ gca.c: In function ���GCAcomputeNumberOfGoodFittingSamples���: gca.c:30370:38: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:30370:30: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c:30370:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, i, xp, yp, zp ; ^ gca.c: In function ���MRIwmsaHalo���: gca.c:31006:16: warning: variable ���nwm��� set but not used [-Wunused-but-set-variable] int h, label, nwm, nwmsa, ngm, x, y, z, wmsa_label, wm_label, gm_label, a, b, changed; ^ mv -f .deps/libutils_cuda_a-fmriutils.Tpo .deps/libutils_cuda_a-fmriutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gcamorph.o -MD -MP -MF .deps/libutils_cuda_a-gcamorph.Tpo -c -o libutils_cuda_a-gcamorph.o `test -f 'gcamorph.c' || echo './'`gcamorph.c mv -f .deps/libutils_cuda_a-gcaboundary.Tpo .deps/libutils_cuda_a-gcaboundary.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gcarray.o -MD -MP -MF .deps/libutils_cuda_a-gcarray.Tpo -c -o libutils_cuda_a-gcarray.o `test -f 'gcarray.c' || echo './'`gcarray.c gcamorph.c: In function ���GCAMregister���: gcamorph.c:998:63: warning: variable ���rzmin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c:998:56: warning: variable ���rymin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c:998:49: warning: variable ���rxmin��� set but not used [-Wunused-but-set-variable] double rtx, rty, rtz, rx, ry, rz, d, dmin, rxmin, rymin, rzmin ; ^ gcamorph.c: In function ���gcamVolumeChangeTermAtNode���: gcamorph.c:3520:25: warning: variable ���orig_area��� set but not used [-Wunused-but-set-variable] double area, orig_area, del_v_scale, uk, image_val, error ; ^ gcamorph.c:3520:19: warning: variable ���area��� set but not used [-Wunused-but-set-variable] double area, orig_area, del_v_scale, uk, image_val, error ; ^ gcamorph.c: In function ���gcamLimitGradientMagnitude���: gcamorph.c:7092:18: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] float dt ; ^ gcamorph.c: In function ���gcamSpringTerm���: gcamorph.c:7814:67: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7814:59: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7814:52: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c: In function ���gcamSpringEnergy���: gcamorph.c:7998:67: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7998:59: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c:7998:52: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, xk, yk, zk, xn, yn, zn, width, height, depth, num ; ^ gcamorph.c: In function ���GCAMinvert���: gcamorph.c:8612:57: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c:8612:53: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c:8612:49: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, xv, yv, zv ; ^ gcamorph.c: In function ���gcamMapTerm���: gcamorph.c:10783:20: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan=NULL ; ^ gcamorph.c: In function ���gcamMapEnergy���: gcamorph.c:10933:20: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gcamorph.c: In function ���gcamAreaIntensityEnergy���: gcamorph.c:11974:90: warning: variable ���zmax��� set but not used [-Wunused-but-set-variable] x1, y1, z1, xk, yk, zk, xi, yi, zi, xmax, ymax, zmax; ^ gcamorph.c:11973:42: warning: variable ���debug��� set but not used [-Wunused-but-set-variable] int x, y, z, xn, yn, zn, i, debug = 0, nbrs=0, ^ gcamorph.c:11972:80: warning: variable ���z0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcamorph.c:11972:76: warning: variable ���y0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcamorph.c:11972:72: warning: variable ���x0��� set but not used [-Wunused-but-set-variable] double sse, val, image_val, sum_v, sum_uv, error, c, distsq, x0, y0, z0, dx, dy, dz, max_increase ; ^ gcarray.c: In function ���GCarrayClassify���: gcarray.c:507:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth ; ^ gcarray.c: In function ���GCarrayUpdateMeans���: gcarray.c:886:38: warning: variable ���overlap��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap ; ^ gcarray.c:886:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap ; ^ gcamorph.c: In function ���gcamComputeMostLikelyDirection���: gcamorph.c:15367:54: warning: variable ���max_z��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcarray.c: In function ���GCarrayUpdateCovariances���: gcarray.c:998:38: warning: variable ���overlap��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap, col, row ; ^ gcarray.c:998:3: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] nclasses, swidth, sheight, sdepth, overlap, col, row ; ^ gcamorph.c:15367:47: warning: variable ���max_y��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcamorph.c:15367:40: warning: variable ���max_x��� set but not used [-Wunused-but-set-variable] double val, max_val, max_dist, dist, max_x, max_y, max_z ; ^ gcamorph.c: In function ���gcamConstrainJacobian���: gcamorph.c:15731:40: warning: variable ���start_rms��� set but not used [-Wunused-but-set-variable] min_jacobian, max_jacobian, start_rms ; ^ gcamorph.c:15730:52: warning: variable ���rms��� set but not used [-Wunused-but-set-variable] double alpha, delta, lower_alpha, upper_alpha, rms, ^ gcamorph.c: In function ���gcamExpansionTerm���: gcamorph.c:16886:13: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double sse, error_0, error_n, dx, dy, dz ; ^ gcamorph.c: In function ���GCAMlogPosterior���: gcamorph.c:18720:28: warning: variable ���best_label��� set but not used [-Wunused-but-set-variable] int xn, yn, zn, n, best_label ; ^ gcamorph.c: In function ���MRIcomputeGaussNewtonStep���: gcamorph.c:19054:33: warning: variable ���m_I��� set but not used [-Wunused-but-set-variable] MATRIX *m_J, *m_J_t, *m_inv, *m_I, *m_tmp = NULL, *v_r, *v_v, *m_tmp2 = NULL, *m_D ; ^ gcamorph.c: In function ���MRIcomputeDistanceTransformStep���: gcamorph.c:20003:30: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c:20003:26: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c:20003:22: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] double Ix, Iy, Iz, dx, dy, dz, tval, sval, error, norm ; ^ gcamorph.c: In function ���GCAMSreclassifyUsingGibbsPriors���: gcamorph.c:20465:21: warning: variable ���gcan��� set but not used [-Wunused-but-set-variable] GCA_NODE *gcan ; ^ gcamorph.c:20269:50: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height, depth, label, val, iter, ^ gcamorph.c: In function ���GCAMcomputeVentricleExpansionGradient���: gcamorph.c:21359:24: warning: variable ���outside_scale��� set but not used [-Wunused-but-set-variable] double val, outside_scale ; ^ gcamorph.c: In function ���GCAMregisterVentricles���: gcamorph.c:21458:103: warning: variable ���l_orig_elastic��� set but not used [-Wunused-but-set-variable] double val, base_sigma, pct_change, rms, last_rms = 0.0, orig_dt, l_orig_smooth, min_dt, l_orig_elastic, l_elastic, tol, ^ mv -f .deps/libutils_cuda_a-gcarray.Tpo .deps/libutils_cuda_a-gcarray.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gclass.o -MD -MP -MF .deps/libutils_cuda_a-gclass.Tpo -c -o libutils_cuda_a-gclass.o `test -f 'gclass.c' || echo './'`gclass.c gcamorph.c: In function ���GCAMdownsample2���: gcamorph.c:21192:21: warning: iteration 5117u invokes undefined behavior [-Waggressive-loop-optimizations] if (labels[l] > max_count) ^ gcamorph.c:21191:9: note: containing loop for (l = 1 ; l <= MAX_CMA_LABELS ; l++) ^ mv -f .deps/libutils_cuda_a-gclass.Tpo .deps/libutils_cuda_a-gclass.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gcsa.o -MD -MP -MF .deps/libutils_cuda_a-gcsa.Tpo -c -o libutils_cuda_a-gcsa.o `test -f 'gcsa.c' || echo './'`gcsa.c gcsa.c: In function ���GCSAlabel���: gcsa.c:940:15: warning: variable ���cp��� set but not used [-Wunused-but-set-variable] CP *cp ; ^ gcsa.c: In function ���GCSAreclassifyUsingGibbsPriors���: gcsa.c:1297:15: warning: variable ���gcsan��� set but not used [-Wunused-but-set-variable] GCSA_NODE *gcsan ; ^ mv -f .deps/mrisurf.Tpo .deps/mrisurf.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-getdelim.o -MD -MP -MF .deps/libutils_cuda_a-getdelim.Tpo -c -o libutils_cuda_a-getdelim.o `test -f 'getdelim.c' || echo './'`getdelim.c mv -f .deps/libutils_cuda_a-getdelim.Tpo .deps/libutils_cuda_a-getdelim.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-getline.o -MD -MP -MF .deps/libutils_cuda_a-getline.Tpo -c -o libutils_cuda_a-getline.o `test -f 'getline.c' || echo './'`getline.c mv -f .deps/libutils_cuda_a-getline.Tpo .deps/libutils_cuda_a-getline.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gifti_io.o -MD -MP -MF .deps/libutils_cuda_a-gifti_io.Tpo -c -o libutils_cuda_a-gifti_io.o `test -f 'gifti_io.c' || echo './'`gifti_io.c gifti_io.c: In function ���gifti_compare_nvpairs���: gifti_io.c:3094:15: warning: variable ���len��� set but not used [-Wunused-but-set-variable] int c, len, diffs = 0; ^ gifti_io.c: In function ���compare_labeltables���: gifti_io.c:3189:12: warning: variable ���roff��� set but not used [-Wunused-but-set-variable] int c, roff, offset, diffs = 0; ^ gifti_io.c: In function ���gifti_clear_gifti_image���: gifti_io.c:4096:26: warning: argument to ���sizeof��� in ���memset��� call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] memset(gim, 0, sizeof(gim)); ^ mv -f .deps/libutils_cuda_a-gcsa.Tpo .deps/libutils_cuda_a-gcsa.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gifti_local.o -MD -MP -MF .deps/libutils_cuda_a-gifti_local.Tpo -c -o libutils_cuda_a-gifti_local.o `test -f 'gifti_local.c' || echo './'`gifti_local.c gifti_local.c: In function ���mrisReadGIFTIdanum���: gifti_local.c:472:32: warning: argument to ���sizeof��� in ���memset��� call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] memset(ct->entries,0,sizeof(ct->entries)); ^ gcamorph.c: In function ���GCAMmorphSurf���: gcamorph.c:6741:7: warning: ���My��� may be used uninitialized in this function [-Wmaybe-uninitialized] printf(" Avxyz = (%g,%g,%g), Mvxyz = (%g,%g,%g), \n", ^ gcamorph.c:6741:7: warning: ���Mz��� may be used uninitialized in this function [-Wmaybe-uninitialized] gcamorph.c:6741:7: warning: ���Mx��� may be used uninitialized in this function [-Wmaybe-uninitialized] mv -f .deps/libutils_cuda_a-gifti_local.Tpo .deps/libutils_cuda_a-gifti_local.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gifti_xml.o -MD -MP -MF .deps/libutils_cuda_a-gifti_xml.Tpo -c -o libutils_cuda_a-gifti_xml.o `test -f 'gifti_xml.c' || echo './'`gifti_xml.c gifti_xml.c: In function ���decode_b64���: gifti_xml.c:2056:29: warning: variable ���c��� set but not used [-Wunused-but-set-variable] unsigned char a, b, c; ^ mv -f .deps/libutils_cuda_a-gifti_xml.Tpo .deps/libutils_cuda_a-gifti_xml.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gtm.o -MD -MP -MF .deps/libutils_cuda_a-gtm.Tpo -c -o libutils_cuda_a-gtm.o `test -f 'gtm.c' || echo './'`gtm.c mv -f .deps/libutils_cuda_a-gifti_io.Tpo .deps/libutils_cuda_a-gifti_io.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gw_ic2562.o -MD -MP -MF .deps/libutils_cuda_a-gw_ic2562.Tpo -c -o libutils_cuda_a-gw_ic2562.o `test -f 'gw_ic2562.c' || echo './'`gw_ic2562.c mv -f .deps/libutils_cuda_a-gw_ic2562.Tpo .deps/libutils_cuda_a-gw_ic2562.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-gw_utils.o -MD -MP -MF .deps/libutils_cuda_a-gw_utils.Tpo -c -o libutils_cuda_a-gw_utils.o `test -f 'gw_utils.c' || echo './'`gw_utils.c gw_utils.c: In function ���MRIFromMHTandMRIS���: gw_utils.c:207:7: warning: variable ���fno_usage��� set but not used [-Wunused-but-set-variable] int fno_usage; // ^ gw_utils.c: In function ���nowstr���: gw_utils.c:317:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mv -f .deps/libutils_cuda_a-gw_utils.Tpo .deps/libutils_cuda_a-gw_utils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-handle.o -MD -MP -MF .deps/libutils_cuda_a-handle.Tpo -c -o libutils_cuda_a-handle.o `test -f 'handle.c' || echo './'`handle.c mv -f .deps/libutils_cuda_a-handle.Tpo .deps/libutils_cuda_a-handle.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-heap.o -MD -MP -MF .deps/libutils_cuda_a-heap.Tpo -c -o libutils_cuda_a-heap.o `test -f 'heap.c' || echo './'`heap.c heap.c: In function ���xhInsert���: heap.c:430:17: warning: variable ���a��� set but not used [-Wunused-but-set-variable] XheapElement *a, v; ^ mv -f .deps/libutils_cuda_a-heap.Tpo .deps/libutils_cuda_a-heap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-hippo.o -MD -MP -MF .deps/libutils_cuda_a-hippo.Tpo -c -o libutils_cuda_a-hippo.o `test -f 'hippo.c' || echo './'`hippo.c mv -f .deps/libutils_cuda_a-hippo.Tpo .deps/libutils_cuda_a-hippo.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-histo.o -MD -MP -MF .deps/libutils_cuda_a-histo.Tpo -c -o libutils_cuda_a-histo.o `test -f 'histo.c' || echo './'`histo.c histo.c: In function ���HISTOfindHighestPeakInRegion���: histo.c:1089:11: warning: variable ���nbins��� set but not used [-Wunused-but-set-variable] int b, nbins, max_count_bin ; ^ histo.c: In function ���HISTOfindCurrentPeak���: histo.c:1411:13: warning: variable ���bv��� set but not used [-Wunused-but-set-variable] int bv ; ^ histo.c:1445:13: warning: variable ���bv��� set but not used [-Wunused-but-set-variable] int bv ; ^ mv -f .deps/libutils_cuda_a-gtm.Tpo .deps/libutils_cuda_a-gtm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ic163842.o -MD -MP -MF .deps/libutils_cuda_a-ic163842.Tpo -c -o libutils_cuda_a-ic163842.o `test -f 'ic163842.c' || echo './'`ic163842.c mv -f .deps/libutils_cuda_a-ic163842.Tpo .deps/libutils_cuda_a-ic163842.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ic2562.o -MD -MP -MF .deps/libutils_cuda_a-ic2562.Tpo -c -o libutils_cuda_a-ic2562.o `test -f 'ic2562.c' || echo './'`ic2562.c mv -f .deps/libutils_cuda_a-ic2562.Tpo .deps/libutils_cuda_a-ic2562.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ic642.o -MD -MP -MF .deps/libutils_cuda_a-ic642.Tpo -c -o libutils_cuda_a-ic642.o `test -f 'ic642.c' || echo './'`ic642.c mv -f .deps/libutils_cuda_a-ic642.Tpo .deps/libutils_cuda_a-ic642.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ic42.o -MD -MP -MF .deps/libutils_cuda_a-ic42.Tpo -c -o libutils_cuda_a-ic42.o `test -f 'ic42.c' || echo './'`ic42.c mv -f .deps/libutils_cuda_a-ic42.Tpo .deps/libutils_cuda_a-ic42.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ic12.o -MD -MP -MF .deps/libutils_cuda_a-ic12.Tpo -c -o libutils_cuda_a-ic12.o `test -f 'ic12.c' || echo './'`ic12.c mv -f .deps/libutils_cuda_a-ic12.Tpo .deps/libutils_cuda_a-ic12.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-icosahedron.o -MD -MP -MF .deps/libutils_cuda_a-icosahedron.Tpo -c -o libutils_cuda_a-icosahedron.o `test -f 'icosahedron.c' || echo './'`icosahedron.c mv -f .deps/libutils_cuda_a-icosahedron.Tpo .deps/libutils_cuda_a-icosahedron.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-image.o -MD -MP -MF .deps/libutils_cuda_a-image.Tpo -c -o libutils_cuda_a-image.o `test -f 'image.c' || echo './'`image.c image.c: In function ���ImageThreshold���: image.c:202:12: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode ; ^ image.c: In function ���ImageScaleRange���: image.c:1302:43: warning: variable ���dlow��� set but not used [-Wunused-but-set-variable] double *dsrc, dval, dmin, dmax, dnorm, dlow ; ^ image.c: In function ���ImageReflect���: image.c:2030:32: warning: variable ���itmp��� set but not used [-Wunused-but-set-variable] unsigned int *isrc, *idst, *itmp ; ^ image.c:2029:30: warning: variable ���tmp��� set but not used [-Wunused-but-set-variable] unsigned char *src, *dst, *tmp ; ^ mv -f .deps/libutils_cuda_a-histo.Tpo .deps/libutils_cuda_a-histo.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-imageio.o -MD -MP -MF .deps/libutils_cuda_a-imageio.Tpo -c -o libutils_cuda_a-imageio.o `test -f 'imageio.c' || echo './'`imageio.c imageio.c: In function ���ImageWrite���: imageio.c:107:9: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode ; ^ imageio.c: In function ���TiffReadImage���: imageio.c:852:26: warning: variable ���extra_samples��� set but not used [-Wunused-but-set-variable] int scanlinesize, extra_samples; ^ imageio.c: In function ���TiffReadHeader���: imageio.c:1243:46: warning: variable ���extra_samples��� set but not used [-Wunused-but-set-variable] int ret, width, height, bits_per_sample, extra_samples ; ^ imageio.c:1243:9: warning: variable ���ret��� set but not used [-Wunused-but-set-variable] int ret, width, height, bits_per_sample, extra_samples ; ^ mv -f .deps/libutils_cuda_a-imageio.Tpo .deps/libutils_cuda_a-imageio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-imautils.o -MD -MP -MF .deps/libutils_cuda_a-imautils.Tpo -c -o libutils_cuda_a-imautils.o `test -f 'imautils.c' || echo './'`imautils.c mv -f .deps/libutils_cuda_a-gcamorph.Tpo .deps/libutils_cuda_a-gcamorph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-intensity_eig.o -MD -MP -MF .deps/libutils_cuda_a-intensity_eig.Tpo -c -o libutils_cuda_a-intensity_eig.o `test -f 'intensity_eig.c' || echo './'`intensity_eig.c mv -f .deps/libutils_cuda_a-intensity_eig.Tpo .deps/libutils_cuda_a-intensity_eig.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-inverse.o -MD -MP -MF .deps/libutils_cuda_a-inverse.Tpo -c -o libutils_cuda_a-inverse.o `test -f 'inverse.c' || echo './'`inverse.c mv -f .deps/libutils_cuda_a-inverse.Tpo .deps/libutils_cuda_a-inverse.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-ipmpar.o -MD -MP -MF .deps/libutils_cuda_a-ipmpar.Tpo -c -o libutils_cuda_a-ipmpar.o `test -f 'ipmpar.c' || echo './'`ipmpar.c mv -f .deps/libutils_cuda_a-ipmpar.Tpo .deps/libutils_cuda_a-ipmpar.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-kernel.o -MD -MP -MF .deps/libutils_cuda_a-kernel.Tpo -c -o libutils_cuda_a-kernel.o `test -f 'kernel.c' || echo './'`kernel.c mv -f .deps/libutils_cuda_a-kernel.Tpo .deps/libutils_cuda_a-kernel.Po mv -f .deps/libutils_cuda_a-imautils.Tpo .deps/libutils_cuda_a-imautils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-kinput.o -MD -MP -MF .deps/libutils_cuda_a-kinput.Tpo -c -o libutils_cuda_a-kinput.o `test -f 'kinput.c' || echo './'`kinput.c gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-label.o -MD -MP -MF .deps/libutils_cuda_a-label.Tpo -c -o libutils_cuda_a-label.o `test -f 'label.c' || echo './'`label.c mv -f .deps/libutils_cuda_a-kinput.Tpo .deps/libutils_cuda_a-kinput.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-lpafile.o -MD -MP -MF .deps/libutils_cuda_a-lpafile.Tpo -c -o libutils_cuda_a-lpafile.o `test -f 'lpafile.c' || echo './'`lpafile.c lpafile.c: In function ���LPAFresetImageAnswer���: lpafile.c:152:11: warning: variable ���lpb��� set but not used [-Wunused-but-set-variable] LP_BOX *lpb ; ^ mv -f .deps/libutils_cuda_a-lpafile.Tpo .deps/libutils_cuda_a-lpafile.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-machine.o -MD -MP -MF .deps/libutils_cuda_a-machine.Tpo -c -o libutils_cuda_a-machine.o `test -f 'machine.c' || echo './'`machine.c mv -f .deps/libutils_cuda_a-image.Tpo .deps/libutils_cuda_a-image.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-MARS_DT_Boundary.o -MD -MP -MF .deps/libutils_cuda_a-MARS_DT_Boundary.Tpo -c -o libutils_cuda_a-MARS_DT_Boundary.o `test -f 'MARS_DT_Boundary.c' || echo './'`MARS_DT_Boundary.c mv -f .deps/libutils_cuda_a-machine.Tpo .deps/libutils_cuda_a-machine.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-matfile.o -MD -MP -MF .deps/libutils_cuda_a-matfile.Tpo -c -o libutils_cuda_a-matfile.o `test -f 'matfile.c' || echo './'`matfile.c mv -f .deps/libutils_cuda_a-MARS_DT_Boundary.Tpo .deps/libutils_cuda_a-MARS_DT_Boundary.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-matrix.o -MD -MP -MF .deps/libutils_cuda_a-matrix.Tpo -c -o libutils_cuda_a-matrix.o `test -f 'matrix.c' || echo './'`matrix.c matfile.c: In function ���MatlabRead���: matfile.c:88:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col ; ^ matfile.c: In function ���MatFileRead���: matfile.c:174:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col ; ^ matfile.c:171:13: warning: variable ���name��� set but not used [-Wunused-but-set-variable] char *name ; ^ matfile.c: In function ���ReadMatlabFileContents���: matfile.c:654:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col, len ; ^ matfile.c: In function ���MatlabRead2���: matfile.c:887:12: warning: variable ���file_type��� set but not used [-Wunused-but-set-variable] int file_type, nrows, ncols, row, col; ^ matrix.c: In function ���MatrixInverse���: matrix.c:115:17: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float **a, **y; ^ matrix.c:115:12: warning: variable ���a��� set but not used [-Wunused-but-set-variable] float **a, **y; ^ matrix.c: In function ���MatrixClear���: matrix.c:1159:10: warning: variable ���rows��� set but not used [-Wunused-but-set-variable] int rows, row, cols ; ^ mv -f .deps/libutils_cuda_a-matfile.Tpo .deps/libutils_cuda_a-matfile.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mgh_filter.o -MD -MP -MF .deps/libutils_cuda_a-mgh_filter.Tpo -c -o libutils_cuda_a-mgh_filter.o `test -f 'mgh_filter.c' || echo './'`mgh_filter.c mgh_filter.c: In function ���bandpass���: mgh_filter.c:117:9: warning: variable ���norm��� set but not used [-Wunused-but-set-variable] float norm,f,fl,fh,w,wh,wl; ^ mv -f .deps/libutils_cuda_a-mgh_filter.Tpo .deps/libutils_cuda_a-mgh_filter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mgh_matrix.o -MD -MP -MF .deps/libutils_cuda_a-mgh_matrix.Tpo -c -o libutils_cuda_a-mgh_matrix.o `test -f 'mgh_matrix.c' || echo './'`mgh_matrix.c mv -f .deps/libutils_cuda_a-label.Tpo .deps/libutils_cuda_a-label.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-min_heap.o -MD -MP -MF .deps/libutils_cuda_a-min_heap.Tpo -c -o libutils_cuda_a-min_heap.o `test -f 'min_heap.c' || echo './'`min_heap.c mv -f .deps/libutils_cuda_a-min_heap.Tpo .deps/libutils_cuda_a-min_heap.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mincutils.o -MD -MP -MF .deps/libutils_cuda_a-mincutils.Tpo -c -o libutils_cuda_a-mincutils.o `test -f 'mincutils.c' || echo './'`mincutils.c mv -f .deps/libutils_cuda_a-mincutils.Tpo .deps/libutils_cuda_a-mincutils.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-minmaxrc.o -MD -MP -MF .deps/libutils_cuda_a-minmaxrc.Tpo -c -o libutils_cuda_a-minmaxrc.o `test -f 'minmaxrc.c' || echo './'`minmaxrc.c mv -f .deps/libutils_cuda_a-mgh_matrix.Tpo .deps/libutils_cuda_a-mgh_matrix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-morph.o -MD -MP -MF .deps/libutils_cuda_a-morph.Tpo -c -o libutils_cuda_a-morph.o `test -f 'morph.c' || echo './'`morph.c mv -f .deps/libutils_cuda_a-minmaxrc.Tpo .deps/libutils_cuda_a-minmaxrc.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mosaic.o -MD -MP -MF .deps/libutils_cuda_a-mosaic.Tpo -c -o libutils_cuda_a-mosaic.o `test -f 'mosaic.c' || echo './'`mosaic.c morph.c: In function ���ImageDilate���: morph.c:666:10: warning: variable ���ecode��� set but not used [-Wunused-but-set-variable] int ecode, center_row, center_col ; ^ mosaic.c: In function ���VolSS2MosSS���: morph.c: In function ���ImageErode���: morph.c:733:10: warning: variable ���tmp��� set but not used [-Wunused-but-set-variable] IMAGE *tmp; ^ mosaic.c:89:15: warning: variable ���nrtmos��� set but not used [-Wunused-but-set-variable] int nctmos, nrtmos; ^ morph.c:732:7: warning: variable ���i��� set but not used [-Wunused-but-set-variable] int i=which; /* prevents warning */ ^ mosaic.c: In function ���MosSS2VolSS���: mosaic.c:146:15: warning: variable ���nrtmos��� set but not used [-Wunused-but-set-variable] int nctmos, nrtmos; ^ morph.c: In function ���morphFilter���: morph.c:911:51: warning: variable ���endpix��� set but not used [-Wunused-but-set-variable] row_start, row_end, col_start, col_end, *dpix, *endpix ; ^ morph.c:910:40: warning: variable ���row_pix��� set but not used [-Wunused-but-set-variable] int rows, cols, row, col, row_pix, ^ morph.c: In function ���morphApplyLut���: morph.c:956:35: warning: variable ���endpix��� set but not used [-Wunused-but-set-variable] register unsigned char *dpix, *endpix ; ^ mv -f .deps/libutils_cuda_a-mosaic.Tpo .deps/libutils_cuda_a-mosaic.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri2.o -MD -MP -MF .deps/libutils_cuda_a-mri2.Tpo -c -o libutils_cuda_a-mri2.o `test -f 'mri2.c' || echo './'`mri2.c mv -f .deps/libutils_cuda_a-morph.Tpo .deps/libutils_cuda_a-morph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri.o -MD -MP -MF .deps/libutils_cuda_a-mri.Tpo -c -o libutils_cuda_a-mri.o `test -f 'mri.c' || echo './'`mri.c mri2.c: In function ���mri_rescale���: mri2.c:267:30: warning: variable ���volrange��� set but not used [-Wunused-but-set-variable] float val, volmin, volmax, volrange, range; ^ mri2.c: In function ���MRIvol2Vol���: mri2.c:728:7: warning: variable ���sinchw��� set but not used [-Wunused-but-set-variable] int sinchw; ^ mri2.c: In function ���MRIannot2CorticalSeg���: mri2.c:4756:58: warning: variable ���wmval��� set but not used [-Wunused-but-set-variable] int r,s,asegv,annot,annotid,vtxno,wvtxno,pvtxno,segv,wmval; ^ mri.c: In function ���MRIrmsDifferenceNonzero���: mri.c:1510:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, frame, nvox ; ^ mri.c: In function ���MRIrotateX���: mri.c:7053:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7053:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7053:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateY���: mri.c:7092:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7092:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7092:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateZ���: mri.c:7132:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7132:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7132:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateX_I���: mri.c:7169:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7169:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7169:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateY_I���: mri.c:7202:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7202:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7202:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIrotateZ_I���: mri.c:7235:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7235:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:7235:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���ImageToMRI���: mri.c:8013:21: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8013:18: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8013:15: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:23: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:20: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8036:17: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int rgb, r, g, b ; ^ mri.c:8032:17: warning: variable ���val��� set but not used [-Wunused-but-set-variable] int val ; ^ mri.c: In function ���MRIextractTalairachPlane���: mri.c:9274:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, x0, y0, z0 ; ^ mri.c: In function ���MRIeraseTalairachPlaneNew���: mri.c:9439:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len, xt0, yt0, zt0 ; ^ mri.c: In function ���MRIeraseTalairachPlane���: mri.c:9550:26: warning: variable ���len��� set but not used [-Wunused-but-set-variable] double ex, ey, ez, len ; ^ mri.c: In function ���MRIfillPlane���: mri.c:9720:28: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height ; ^ mri.c:9720:21: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, height ; ^ mri.c: In function ���MRIinterpolate���: mri.c:9842:18: warning: variable ���outval��� set but not used [-Wunused-but-set-variable] float vals[8], outval ; ^ mri.c: In function ���MRItrilinKernel���: mri.c:10895:30: warning: variable ���zp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c:10895:22: warning: variable ���yp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c:10895:14: warning: variable ���xp��� set but not used [-Wunused-but-set-variable] int f,xm, xp, ym, yp, zm, zp, width, height, depth ; ^ mri.c: In function ���MRIsincSampleVolume���: mri.c:11276:22: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11276:16: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11276:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c: In function ���MRIsincSampleVolumeFrame���: mri.c:11408:22: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11408:16: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c:11408:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize,ysize,zsize; ^ mri.c: In function ���MRIsampleVolumeGradient���: mri.c:11878:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11878:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11878:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c: In function ���MRIsampleVolumeGradientFrame���: mri.c:11945:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11945:15: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mri.c:11945:8: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mv -f .deps/libutils_cuda_a-matrix.Tpo .deps/libutils_cuda_a-matrix.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriBSpline.o -MD -MP -MF .deps/libutils_cuda_a-mriBSpline.Tpo -c -o libutils_cuda_a-mriBSpline.o `test -f 'mriBSpline.c' || echo './'`mriBSpline.c mv -f .deps/libutils_cuda_a-mri2.Tpo .deps/libutils_cuda_a-mri2.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriclass.o -MD -MP -MF .deps/libutils_cuda_a-mriclass.Tpo -c -o libutils_cuda_a-mriclass.o `test -f 'mriclass.c' || echo './'`mriclass.c mriclass.c: In function ���MRICclassify���: mriclass.c:492:37: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c:492:30: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c:492:23: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, width, depth, height, classno, nclasses, xt, yt,zt, type, ^ mriclass.c: In function ���MRICupdateStatistics���: mriclass.c:1254:31: warning: variable ���src��� set but not used [-Wunused-but-set-variable] BUFTYPE *psrc, *ptarget, src ; ^ mriclass.c:1252:57: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:49: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:42: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c:1252:32: warning: variable ���nclasses��� set but not used [-Wunused-but-set-variable] int x, y, z, classno, nclasses, width, height, depth, row, col, ^ mriclass.c: In function ���MRICbuildScatterPlot���: mriclass.c:1938:59: warning: variable ���bin_offset��� set but not used [-Wunused-but-set-variable] int obs_no = 0, i, x, y, nbins, half_bins, bin_offset ; ^ mv -f .deps/libutils_cuda_a-mriBSpline.Tpo .deps/libutils_cuda_a-mriBSpline.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri_conform.o -MD -MP -MF .deps/libutils_cuda_a-mri_conform.Tpo -c -o libutils_cuda_a-mri_conform.o `test -f 'mri_conform.c' || echo './'`mri_conform.c mri_conform.c: In function ���MRIconform���: mri_conform.c:86:7: warning: variable ���KeepDC��� set but not used [-Wunused-but-set-variable] int KeepDC; ^ mri_conform.c:85:10: warning: variable ���conform_size��� set but not used [-Wunused-but-set-variable] double conform_size; ^ mri_conform.c:84:7: warning: variable ���conform_width��� set but not used [-Wunused-but-set-variable] int conform_width; ^ mv -f .deps/libutils_cuda_a-mri_conform.Tpo .deps/libutils_cuda_a-mri_conform.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mricurv.o -MD -MP -MF .deps/libutils_cuda_a-mricurv.Tpo -c -o libutils_cuda_a-mricurv.o `test -f 'mricurv.c' || echo './'`mricurv.c mriclass.c:1997:13: warning: ���z[1]��� may be used uninitialized in this function [-Wmaybe-uninitialized] y = z[1]*(nbins-1)+1 ; ^ mriclass.c:1996:13: warning: ���z[0]��� may be used uninitialized in this function [-Wmaybe-uninitialized] x = z[0]*(nbins-1)+1 ; ^ mv -f .deps/libutils_cuda_a-mriclass.Tpo .deps/libutils_cuda_a-mriclass.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriflood.o -MD -MP -MF .deps/libutils_cuda_a-mriflood.Tpo -c -o libutils_cuda_a-mriflood.o `test -f 'mriflood.c' || echo './'`mriflood.c mriflood.c: In function ���MRISshell���: mriflood.c:199:35: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:31: warning: variable ���zz0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:27: warning: variable ���yy1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:23: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:19: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:15: warning: variable ���xx0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:12: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:199:9: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:198:7: warning: variable ���imnr0��� set but not used [-Wunused-but-set-variable] int imnr0; ^ mriflood.c: In function ���MRISpartialshell���: mriflood.c:632:35: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:31: warning: variable ���zz0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:27: warning: variable ���yy1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:23: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:19: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:15: warning: variable ���xx0��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:12: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:632:9: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float ps,st,xx0,xx1,yy0,yy1,zz0,zz1,x0,y0,z0,x1,y1,z1,x2,y2,z2,d0,d1,d2,dmax; ^ mriflood.c:631:7: warning: variable ���imnr0��� set but not used [-Wunused-but-set-variable] int imnr0; ^ mriflood.c: In function ���MRIbitwiseor���: mriflood.c:746:20: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:746:16: warning: variable ���p2��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:746:12: warning: variable ���p1��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c: In function ���MRIbitwiseand���: mriflood.c:776:20: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:776:16: warning: variable ���p2��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mriflood.c:776:12: warning: variable ���p1��� set but not used [-Wunused-but-set-variable] BUFTYPE *p1,*p2,*pdst,v1,v2; ^ mv -f .deps/libutils_cuda_a-mricurv.Tpo .deps/libutils_cuda_a-mricurv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriFunctionalDataAccess.o -MD -MP -MF .deps/libutils_cuda_a-mriFunctionalDataAccess.Tpo -c -o libutils_cuda_a-mriFunctionalDataAccess.o `test -f 'mriFunctionalDataAccess.c' || echo './'`mriFunctionalDataAccess.c In file included from ../include/mriTransform.h:35:0, from ../include/mriFunctionalDataAccess.h:31, from mriFunctionalDataAccess.c:34: mriFunctionalDataAccess.c: In function ���FunD_New���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:210:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Delete���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:280:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ReshapeIfScalar_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:355:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_FindAndParseStemHeader_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:554:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GuessMetaInformation_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:588:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ParseRegistrationAndInitMatricies_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:784:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_RestoreRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:811:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetClientCoordBounds���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:862:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetConversionMethod���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:892:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:922:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetSampleType���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:951:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ClientSpaceIsTkRegRAS���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:989:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_IsScalar���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1025:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetData���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1108:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSampledData���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1187:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDataForAllTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1251:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDeviation���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1325:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetDeviationForAllTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1399:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Smooth���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1442:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_NormalizeOverAll���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1472:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ConvertTimePointToSecond���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1511:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ConvertSecondToTimePoint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1542:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetTimeResolution���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1572:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetNumPreStimTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1602:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetSubjectName���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1632:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1662:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumConditions���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1692:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetTimeResolution���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1723:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetNumPreStimTimePoints���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1754:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetValueRange���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1786:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_IsErrorDataPresent���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1816:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetBoundsInClientSpace���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1884:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_GetValueAtPercentile���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:1952:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_CalcFDRThreshold���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2106:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SaveRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2246:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_SetRegistrationToIdentity���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2279:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ApplyTransformToRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2324:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_TranslateRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2365:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_RotateRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2426:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ScaleRegistration���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2462:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_DebugPrint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2507:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_ResampleData_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2615:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_CalcFrequencies_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:2695:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_Verify���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3138:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_VerifyTimePoint���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3186:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mriFunctionalDataAccess.c: In function ���FunD_VerifyCondition���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���FunD_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriFunctionalDataAccess.c:3210:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, FunD_tErr_NoError, FunD_GetErrorString ); ^ mv -f .deps/libutils_cuda_a-mriflood.Tpo .deps/libutils_cuda_a-mriflood.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriHeadPointList.o -MD -MP -MF .deps/libutils_cuda_a-mriHeadPointList.Tpo -c -o libutils_cuda_a-mriHeadPointList.o `test -f 'mriHeadPointList.c' || echo './'`mriHeadPointList.c In file included from ../include/mriTransform.h:35:0, from ../include/mriHeadPointList.h:30, from mriHeadPointList.c:28: mriHeadPointList.c: In function ���HPtL_New���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:132:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mriHeadPointList.c: In function ���HPtL_CreateTransform_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:447:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mriHeadPointList.c: In function ���HPtL_ConvertListToClientSpace_���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���HPtL_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriHeadPointList.c:527:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, HPtL_tErr_NoErr, HPtL_GetErrorString ); ^ mv -f .deps/libutils_cuda_a-mriFunctionalDataAccess.Tpo .deps/libutils_cuda_a-mriFunctionalDataAccess.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrihisto.o -MD -MP -MF .deps/libutils_cuda_a-mrihisto.Tpo -c -o libutils_cuda_a-mrihisto.o `test -f 'mrihisto.c' || echo './'`mrihisto.c mrihisto.c: In function ���MRIhistogramRegion���: mrihisto.c:121:27: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] BUFTYPE bmin, bmax ; ^ mrihisto.c:121:21: warning: variable ���bmin��� set but not used [-Wunused-but-set-variable] BUFTYPE bmin, bmax ; ^ mv -f .deps/libutils_cuda_a-mriHeadPointList.Tpo .deps/libutils_cuda_a-mriHeadPointList.Po mrihisto.c: In function ���mriHistogramLabel���: mrihisto.c:243:29: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c:243:21: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c:243:14: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, bin_no, i ; ^ mrihisto.c: In function ���mriHistogramRegion���: mrihisto.c:356:32: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] BUFTYPE val, *psrc, bmin, bmax ; ^ mrihisto.c:356:26: warning: variable ���bmin��� set but not used [-Wunused-but-set-variable] BUFTYPE val, *psrc, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistogramLabelRegion���: mrihisto.c:848:25: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] int val, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistogramLabel���: mrihisto.c:923:25: warning: variable ���bmax��� set but not used [-Wunused-but-set-variable] int val, bmin, bmax ; ^ mrihisto.c: In function ���MRIhistoSegment���: mrihisto.c:1029:31: warning: variable ���thresh��� set but not used [-Wunused-but-set-variable] valley, wm_peak, gray_peak, thresh, nlabeled ; ^ mrihisto.c: In function ���MRIhistoSegmentVoxel���: mrihisto.c:1203:57: warning: variable ���thresh��� set but not used [-Wunused-but-set-variable] int whalf, in_val, valley, wm_peak, gray_peak, thresh/*, npeaks, ^ gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri_identify.o -MD -MP -MF .deps/libutils_cuda_a-mri_identify.Tpo -c -o libutils_cuda_a-mri_identify.o `test -f 'mri_identify.c' || echo './'`mri_identify.c mri_identify.c: In function ���is_mgh���: mri_identify.c:868:53: warning: variable ���dof��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mri_identify.c:868:47: warning: variable ���type��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mri_identify.c:868:7: warning: variable ���version��� set but not used [-Wunused-but-set-variable] int version, width, height, depth, nframes, type, dof; ^ mv -f .deps/libutils_cuda_a-gca.Tpo .deps/libutils_cuda_a-gca.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-MRIio_old.o -MD -MP -MF .deps/libutils_cuda_a-MRIio_old.Tpo -c -o libutils_cuda_a-MRIio_old.o `test -f 'MRIio_old.c' || echo './'`MRIio_old.c mv -f .deps/libutils_cuda_a-MRIio_old.Tpo .deps/libutils_cuda_a-MRIio_old.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriio.o -MD -MP -MF .deps/libutils_cuda_a-mriio.Tpo -c -o libutils_cuda_a-mriio.o `test -f 'mriio.c' || echo './'`mriio.c mriio.c: In function ���MRIfindRightSize���: mriio.c:403:24: warning: variable ���zsize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c:403:17: warning: variable ���ysize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c:403:10: warning: variable ���xsize��� set but not used [-Wunused-but-set-variable] double xsize, ysize, zsize; ^ mriio.c: In function ���analyzeRead���: mriio.c:6284:21: warning: variable ���signZ��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mriio.c:6284:14: warning: variable ���signY��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mriio.c:6284:7: warning: variable ���signX��� set but not used [-Wunused-but-set-variable] int signX, signY, signZ; ^ mv -f .deps/libutils_cuda_a-mri_identify.Tpo .deps/libutils_cuda_a-mri_identify.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri_level_set.o -MD -MP -MF .deps/libutils_cuda_a-mri_level_set.Tpo -c -o libutils_cuda_a-mri_level_set.o `test -f 'mri_level_set.c' || echo './'`mri_level_set.c mriio.c: In function ���list_labels_in_otl_file���: mriio.c:8830:7: warning: variable ���empty_label_flag��� set but not used [-Wunused-but-set-variable] int empty_label_flag; ^ mriio.c: In function ���MRISreadCurvAsMRI���: mriio.c:9630:23: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int magno,k,vnum,fnum, vals_per_vertex ; ^ mv -f .deps/libutils_cuda_a-mrihisto.Tpo .deps/libutils_cuda_a-mrihisto.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrifilter.o -MD -MP -MF .deps/libutils_cuda_a-mrifilter.Tpo -c -o libutils_cuda_a-mrifilter.o `test -f 'mrifilter.c' || echo './'`mrifilter.c mrifilter.c: In function ���MRImeanInMask���: mrifilter.c:2166:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed; ^ mrifilter.c: In function ���MRImean���: mrifilter.c:2334:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed; ^ mrifilter.c:2329:33: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf; ^ mrifilter.c: In function ���MRIreduce2D���: mrifilter.c:3403:23: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth ; ^ mrifilter.c: In function ���MRInxcorrWindow���: mrifilter.c:4815:23: warning: variable ���pdst��� set but not used [-Wunused-but-set-variable] float dst, norm, *pdst ; ^ mrifilter.c: In function ���MRIborderClassifyVoxel���: mrifilter.c:5394:27: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c:5394:19: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c:5394:12: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, xk, yk, zk, xi, yi, zi, nw, ng, whalf, val ; ^ mrifilter.c: In function ���MRIclassifyAmbiguous���: mrifilter.c:5634:13: warning: variable ���psrc��� set but not used [-Wunused-but-set-variable] BUFTYPE *psrc, *plabeled, *pdst, label, new_label ; ^ mv -f .deps/libutils_cuda_a-mri_level_set.Tpo .deps/libutils_cuda_a-mri_level_set.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrimorph.o -MD -MP -MF .deps/libutils_cuda_a-mrimorph.Tpo -c -o libutils_cuda_a-mrimorph.o `test -f 'mrimorph.c' || echo './'`mrimorph.c mrimorph.c: In function ���MRIinitScaling���: mrimorph.c:1128:35: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c:1128:31: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c:1128:27: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] float sx, sy, sz, dx, dy, dz ; ^ mrimorph.c: In function ���writeSnapshot���: mrimorph.c:1664:13: warning: variable ���transform��� set but not used [-Wunused-but-set-variable] TRANSFORM transform ; ^ mrimorph.c: In function ���ltaGradientStep���: mrimorph.c:1731:19: warning: variable ���m_L��� set but not used [-Wunused-but-set-variable] MATRIX *m_tmp, *m_L, *m_dT_X_T ; ^ mrimorph.c:1730:23: warning: variable ���v_Yk��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_Yk ; /* original and transformed coordinate systems */ ^ mrimorph.c: In function ���m3dDistanceSSE���: mrimorph.c:2202:44: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] double dist, xd, yd, zd, delta, sse, node_spacing ; ^ mrimorph.c: In function ���m3dNonlinearAreaSSE���: mrimorph.c:2291:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c:2289:26: warning: variable ���n3��� set but not used [-Wunused-but-set-variable] double sse, delta, n3, ratio, exponent ; ^ mrimorph.c: In function ���m3dAreaSSE���: mrimorph.c:2354:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRI3Dmorph���: mrimorph.c:2690:20: warning: variable ���base_intensity��� set but not used [-Wunused-but-set-variable] double dt, base_intensity, base_sigma, sigma, base_tol, max_thick ; ^ mrimorph.c:2690:16: warning: variable ���dt��� set but not used [-Wunused-but-set-variable] double dt, base_intensity, base_sigma, sigma, base_tol, max_thick ; ^ mrimorph.c:2686:40: warning: variable ���navgs��� set but not used [-Wunused-but-set-variable] int nlevels, i, max_levels, navgs, base_avgs ; ^ mrimorph.c: In function ���m3dAreaTerm���: mrimorph.c:3656:25: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] float delta, node_spacing, n3 /*, odx, ody, odz*/ ; ^ mrimorph.c:3655:36: warning: variable ���mnpk��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c:3655:30: warning: variable ���mnpj��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c:3655:24: warning: variable ���mnpi��� set but not used [-Wunused-but-set-variable] MNP *mnp,*mnpi,*mnpj,*mnpk ; ^ mrimorph.c: In function ���m3dNonlinearAreaTerm���: mrimorph.c:3914:45: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] float delta, delta_scale, ratio, node_spacing, n3 ; ^ mrimorph.c: In function ���m3dInitDistances���: mrimorph.c:4351:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���m3dscaleDeltaT���: mrimorph.c:4931:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRI3DreadSmall���: mrimorph.c:5085:53: warning: variable ���version��� set but not used [-Wunused-but-set-variable] int i, j, k, width, height, depth, magic, version ; ^ mrimorph.c: In function ���m3dblurGradient���: mrimorph.c:5788:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���MRISshrinkWrapSkull���: mrimorph.c:6058:42: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float radius, max_radius, scale, x0, y0, z0, sx, sy, sz, thick; ^ mrimorph.c: In function ���m3dNodeAverageExpansion���: mrimorph.c:6433:33: warning: variable ���xgrad��� set but not used [-Wunused-but-set-variable] double dx, dy, dz, dist, xgrad, ygrad, zgrad, avg_expansion ; ^ mrimorph.c: In function ���m3dCompressionSSE���: mrimorph.c:6520:44: warning: variable ���node_spacing��� set but not used [-Wunused-but-set-variable] double dist, xd, yd, zd, delta, sse, node_spacing, expansion ; ^ mrimorph.c: In function ���MRIeraseNeck���: mrimorph.c:6648:17: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c:6648:13: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c:6648:9: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, y, thick, x0, y0, z0 ; ^ mrimorph.c: In function ���m3dblurDx���: mrimorph.c:6783:15: warning: variable ���mn��� set but not used [-Wunused-but-set-variable] MORPH_NODE *mn ; ^ mrimorph.c: In function ���m3dMorphSkull���: mrimorph.c:6978:48: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c:6978:44: warning: variable ���dy��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c:6978:40: warning: variable ���dx��� set but not used [-Wunused-but-set-variable] ref_v_x0, ref_v_y0, ref_v_z0, thick, dx, dy, dz,ref_dist,in_dist; ^ mrimorph.c: In function ���computeRigidAlignmentGradient���: mrimorph.c:7597:23: warning: variable ���v_Yk��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_Yk ; /* original and transformed coordinate systems */ ^ mrimorph.c: In function ���computeEMAlignmentGradient���: mrimorph.c:7960:17: warning: variable ���v_Y��� set but not used [-Wunused-but-set-variable] VECTOR *v_X, *v_Y, *v_means, *v_X_T ; /* original and transformed coordinate systems */ ^ mrimorph.c:7959:25: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c:7959:17: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c:7959:10: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, row, col, i, xn, yn, zn, xv, yv, zv, n, ndets=0 ; ^ mrimorph.c: In function ���computeEMAlignmentErrorFunctional���: mrimorph.c:8108:12: warning: variable ���mri_inputs��� set but not used [-Wunused-but-set-variable] MRI *mri_inputs ; ^ mrimorph.c: In function ���powell_minimize���: mrimorph.c:8736:47: warning: variable ���min_sse��� set but not used [-Wunused-but-set-variable] float *p, **xi, fret, fstart, scale_factor, min_sse; ^ mrimorph.c: In function ���mriQuasiNewtonEMAlignPyramidLevel���: mrimorph.c:8947:35: warning: variable ���retval��� set but not used [-Wunused-but-set-variable] int row, col, i, iter, steps, retval ; ^ mrimorph.c: In function ���compute_label_likelihood���: mrimorph.c:9357:20: warning: variable ���hdepth��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mrimorph.c:9357:11: warning: variable ���hheight��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mrimorph.c:9357:3: warning: variable ���hwidth��� set but not used [-Wunused-but-set-variable] hwidth, hheight, hdepth, i ; ^ mv -f .deps/libutils_cuda_a-mrifilter.Tpo .deps/libutils_cuda_a-mrifilter.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrinorm.o -MD -MP -MF .deps/libutils_cuda_a-mrinorm.Tpo -c -o libutils_cuda_a-mrinorm.o `test -f 'mrinorm.c' || echo './'`mrinorm.c mrinorm.c: In function ���MRIbuildBiasImage���: mrinorm.c:1937:26: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c:1937:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c:1937:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, x,y,z ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramShort���: mrinorm.c:2299:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramFloat���: mrinorm.c:2481:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���mriBuildVoronoiDiagramUchar���: mrinorm.c:2663:11: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] float scale ; ^ mrinorm.c: In function ���find_tissue_intensities���: mrinorm.c:4720:58: warning: variable ���wm_valley��� set but not used [-Wunused-but-set-variable] int csf_peak, thresh_bin /*, bg_end*/, wm_peak, wm_valley; ^ mrinorm.c: In function ���MRInormalizeHighSignalLowStd���: mrinorm.c:4958:12: warning: variable ���nctrl��� set but not used [-Wunused-but-set-variable] int nctrl, x, y, z, width, depth, height ; ^ mv -f .deps/libutils_cuda_a-mriio.Tpo .deps/libutils_cuda_a-mriio.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mripolv.o -MD -MP -MF .deps/libutils_cuda_a-mripolv.Tpo -c -o libutils_cuda_a-mripolv.o `test -f 'mripolv.c' || echo './'`mripolv.c mripolv.c: In function ���MRIcountPlanarAboveThreshold���: mripolv.c:883:28: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int whalf, xk, yk, n,xi,yi,zi, ^ mripolv.c: In function ���MRIplaneOfLeastVarianceNormal���: mripolv.c:942:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi ; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormal���: mripolv.c:1055:19: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE *pdst, max_val ; ^ mripolv.c:1053:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val, ^ mripolv.c:1052:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi, xi, yi, zi, *pxi, *pyi, *pzi, x1, y1, z1, x0, y0,z0; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormalMarked���: mripolv.c:1232:19: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE *pdst, max_val, *pmask ; ^ mripolv.c:1230:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val; ^ mripolv.c:1229:9: warning: variable ���maxi��� set but not used [-Wunused-but-set-variable] mini, maxi, xi, yi, zi, *pxi, *pyi, *pzi, x1, y1, z1, x0, y0,z0; ^ mripolv.c: In function ���MRIfindThinWMStrands���: mripolv.c:1517:54: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, yk, n, vertex,xi,yi,zi, ^ mripolv.c:1517:43: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, yk, n, vertex,xi,yi,zi, ^ mripolv.c: In function ���MRIresegmentThinWMStrands���: mripolv.c:1602:31: warning: variable ���max_dist��� set but not used [-Wunused-but-set-variable] double val, xf, yf, zf, max_dist, up_dist, down_dist ; ^ mripolv.c: In function ���MRIthickenThinWMStrands���: mripolv.c:1986:18: warning: variable ���mseg��� set but not used [-Wunused-but-set-variable] MRI_SEGMENT *mseg ; ^ mripolv.c:2010:18: warning: variable ���mseg��� set but not used [-Wunused-but-set-variable] MRI_SEGMENT *mseg ; ^ mripolv.c:1866:31: warning: variable ���max_dist��� set but not used [-Wunused-but-set-variable] double val, xf, yf, zf, max_dist, up_dist, down_dist /*, xt, yt, zt*/ ; ^ mripolv.c: In function ���MRIpolvCount���: mripolv.c:2308:58: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, xk, yk, n, vertex,xi,yi,zi, ^ mripolv.c: In function ���MRIwmfilterMarked���: mripolv.c:2736:43: warning: variable ���whalf��� set but not used [-Wunused-but-set-variable] int width, height, depth, x, y, z, whalf, vertex, num_on, ^ mripolv.c: In function ���MRIneighborhoodPlanarDirection���: mripolv.c:3804:58: warning: variable ���max_count��� set but not used [-Wunused-but-set-variable] x0, x1, y0, y1, z0, z1, x, y, z, num_white, num_black, max_count ; ^ mripolv.c: In function ���MRIcentralPlaneOfLeastVarianceNormalVoxel���: mripolv.c:4384:12: warning: variable ���max_val��� set but not used [-Wunused-but-set-variable] BUFTYPE max_val ; ^ mripolv.c:4383:12: warning: variable ���min_mean��� set but not used [-Wunused-but-set-variable] float min_mean, min_var, max_var, total, total_sq, nv, varv, avgv, val; ^ mripolv.c:4382:15: warning: variable ���max_vertex��� set but not used [-Wunused-but-set-variable] min_vertex, max_vertex, xi, yi, zi, *pxi, *pyi, *pzi; ^ mripolv.c:4381:27: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c:4381:19: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c:4381:12: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, whalf, vertex, xk, yk, ^ mripolv.c: In function ���MRIcpolvMedianCurveVoxel���: mripolv.c:4543:3: warning: variable ���min_val_dist��� set but not used [-Wunused-but-set-variable] min_val_dist ; ^ mripolv.c: In function ���MRIremoveIslands���: mripolv.c:4801:11: warning: variable ���wcubed��� set but not used [-Wunused-but-set-variable] float wcubed ; ^ mv -f .deps/libutils_cuda_a-mrimorph.Tpo .deps/libutils_cuda_a-mrimorph.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriprob.o -MD -MP -MF .deps/libutils_cuda_a-mriprob.Tpo -c -o libutils_cuda_a-mriprob.o `test -f 'mriprob.c' || echo './'`mriprob.c mv -f .deps/libutils_cuda_a-mriprob.Tpo .deps/libutils_cuda_a-mriprob.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrisbiorthogonalwavelets.o -MD -MP -MF .deps/libutils_cuda_a-mrisbiorthogonalwavelets.Tpo -c -o libutils_cuda_a-mrisbiorthogonalwavelets.o `test -f 'mrisbiorthogonalwavelets.c' || echo './'`mrisbiorthogonalwavelets.c mv -f .deps/libutils_cuda_a-mri.Tpo .deps/libutils_cuda_a-mri.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrisegment.o -MD -MP -MF .deps/libutils_cuda_a-mrisegment.Tpo -c -o libutils_cuda_a-mrisegment.o `test -f 'mrisegment.c' || echo './'`mrisegment.c mrisegment.c: In function ���MRImaxSegmentArea���: mrisegment.c:81:7: warning: variable ���max��� set but not used [-Wunused-but-set-variable] int max=-1; ^ mv -f .deps/libutils_cuda_a-mrisbiorthogonalwavelets.Tpo .deps/libutils_cuda_a-mrisbiorthogonalwavelets.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriset.o -MD -MP -MF .deps/libutils_cuda_a-mriset.Tpo -c -o libutils_cuda_a-mriset.o `test -f 'mriset.c' || echo './'`mriset.c mriset.c: In function ���MRImeanMask���: mriset.c:2624:12: warning: variable ���pmask��� set but not used [-Wunused-but-set-variable] BUFTYPE *pmask ; ^ mriset.c: In function ���MRIdivideAseg���: mriset.c:4058:49: warning: variable ���mx��� set but not used [-Wunused-but-set-variable] float evalues[3], dx, dy, dz, e1x, e1y, e1z, mx ; ^ mv -f .deps/libutils_cuda_a-mrinorm.Tpo .deps/libutils_cuda_a-mrinorm.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrishash.o -MD -MP -MF .deps/libutils_cuda_a-mrishash.Tpo -c -o libutils_cuda_a-mrishash.o `test -f 'mrishash.c' || echo './'`mrishash.c mv -f .deps/libutils_cuda_a-mrisegment.Tpo .deps/libutils_cuda_a-mrisegment.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrisp.o -MD -MP -MF .deps/libutils_cuda_a-mrisp.Tpo -c -o libutils_cuda_a-mrisp.o `test -f 'mrisp.c' || echo './'`mrisp.c mrishash.c: In function ���MHTfindClosestVertex���: mrishash.c:2047:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestFaceToVertex���: mrishash.c:2076:9: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestVertexSet���: mrishash.c:2127:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt; ^ mrishash.c: In function ���MHTfindClosestVertexInTable���: mrishash.c:2230:7: warning: variable ���rslt��� set but not used [-Wunused-but-set-variable] int rslt, i; ^ mrisp.c: In function ���MRIStoParameterization���: mrisp.c:398:17: warning: variable ���fp��� set but not used [-Wunused-but-set-variable] **distances, *fp ; ^ mrisp.c: In function ���MRISfromParameterization���: mrisp.c:941:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c:941:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c: In function ���MRIScoordsFromParameterization���: mrisp.c:1038:31: warning: variable ���val4��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:25: warning: variable ���val3��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:19: warning: variable ���val2��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1038:13: warning: variable ���val1��� set but not used [-Wunused-but-set-variable] origz, d, val1, val2, val3, val4 ; ^ mrisp.c:1037:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, origx, origy, ^ mrisp.c:1037:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, origx, origy, ^ mrisp.c: In function ���MRISnormalizeFromParameterization���: mrisp.c:1175:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d, var ; ^ mrisp.c:1175:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d, var ; ^ mrisp.c: In function ���MRISgradientToParameterization���: mrisp.c:1269:23: warning: variable ���two_sigma_sq��� set but not used [-Wunused-but-set-variable] **distances, sigma, two_sigma_sq ; ^ mrisp.c: In function ���MRISgradientFromParameterization���: mrisp.c:1466:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, d ; ^ mrisp.c:1466:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, d ; ^ mrisp.c: In function ���MRISPconvolveGaussian���: mrisp.c:1712:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mrisp.c: In function ���MRISPblur���: mrisp.c:1892:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mrisp.c: In function ���MRISPcombine���: mrisp.c:2161:17: warning: variable ���nframes��� set but not used [-Wunused-but-set-variable] int u, v, nframes ; ^ mrisp.c: In function ���MRISPorLabel���: mrisp.c:2295:14: warning: variable ���vno��� set but not used [-Wunused-but-set-variable] int n, vno, u, v ; ^ mrisp.c: In function ���MRISPandLabel���: mrisp.c:2330:14: warning: variable ���vno��� set but not used [-Wunused-but-set-variable] int n, vno, u, v ; ^ mrisp.c: In function ���MRISPaccumulate���: mrisp.c:2425:17: warning: variable ���nframes��� set but not used [-Wunused-but-set-variable] int u, v, nframes ; ^ mrisp.c: In function ���MRISfromParameterizations���: mrisp.c:2572:37: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c:2572:34: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float a, b, c, phi, theta, x, y, z, uf, vf, du, dv, curv, d ; ^ mrisp.c: In function ���MRISPblurFrames���: mrisp.c:2886:20: warning: variable ���Ip_dst��� set but not used [-Wunused-but-set-variable] IMAGE *Ip_src, *Ip_dst ; ^ mv -f .deps/libutils_cuda_a-mripolv.Tpo .deps/libutils_cuda_a-mripolv.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mriSurface.o -MD -MP -MF .deps/libutils_cuda_a-mriSurface.Tpo -c -o libutils_cuda_a-mriSurface.o `test -f 'mriSurface.c' || echo './'`mriSurface.c In file included from ../include/mriTransform.h:35:0, from ../include/mriSurface.h:30, from mriSurface.c:25: mriSurface.c: In function ���Surf_CopyGeometryInformation���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Surf_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriSurface.c:801:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Surf_tErr_NoErr, Surf_GetErrorString ); ^ mriSurface.c: In function ���Surf_TransformToVolumeGeometry���: ../include/xDebug.h:199:18: warning: the comparison will always evaluate as ���true��� for the address of ���Surf_GetErrorString��� will never be NULL [-Waddress] if( NULL != errorStringFunc ) { \ ^ mriSurface.c:863:3: note: in expansion of macro ���DebugCatchError��� DebugCatchError( eResult, Surf_tErr_NoErr, Surf_GetErrorString ); ^ mv -f .deps/libutils_cuda_a-mriSurface.Tpo .deps/libutils_cuda_a-mriSurface.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrisurf.o -MD -MP -MF .deps/libutils_cuda_a-mrisurf.Tpo -c -o libutils_cuda_a-mrisurf.o `test -f 'mrisurf.c' || echo './'`mrisurf.c In file included from /usr/local/cuda/include/cuda_runtime.h:59:0, from ../include/mrisurf_cuda.h:28, from mrisurf.c:664: /usr/local/cuda/include/host_config.h:159:2: error: #endif without #if #endif /* !__HOST_CONFIG_H__ */ ^ mrisurf.c: In function ���MRISremoveRipped���: mrisurf.c:3539:16: warning: variable ���vn��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn ; ^ mrisurf.c: In function ���MRISreadFloatFile���: mrisurf.c:5060:19: warning: variable ���fmax��� set but not used [-Wunused-but-set-variable] float f, fmin, fmax; ^ mrisurf.c:5060:13: warning: variable ���fmin��� set but not used [-Wunused-but-set-variable] float f, fmin, fmax; ^ mrisurf.c: In function ���MRISregister���: mrisurf.c:6512:23: warning: variable ���done��� set but not used [-Wunused-but-set-variable] int i, start_t, done, sno, ino, msec, min_averages=0, ^ mrisurf.c: In function ���MRISvectorRegister���: mrisurf.c:7114:7: warning: variable ���pdone��� set but not used [-Wunused-but-set-variable] int pdone = 1 ; ^ mrisurf.c:7104:24: warning: variable ���done��� set but not used [-Wunused-but-set-variable] int i,/*steps,*/ done, msec ; ^ mrisurf.c: In function ���MRISunfold���: mrisurf.c:7593:37: warning: variable ���l_area��� set but not used [-Wunused-but-set-variable] double starting_sse, ending_sse, l_area, pct_error ; ^ mrisurf.c:7593:11: warning: variable ���starting_sse��� set but not used [-Wunused-but-set-variable] double starting_sse, ending_sse, l_area, pct_error ; ^ mrisurf.c: In function ���MRISintegrate���: mrisurf.c:8670:32: warning: variable ���pct_neg_area��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8670:23: warning: variable ���pct_neg��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8669:27: warning: variable ���l_spring��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8669:19: warning: variable ���l_area��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8669:11: warning: variable ���l_dist��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c: In function ���mrisIntegrateCUDA���: mrisurf.c:8995:32: warning: variable ���pct_neg_area��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8995:23: warning: variable ���pct_neg��� set but not used [-Wunused-but-set-variable] double sse_thresh, pct_neg, pct_neg_area, total_vertices, tol; ^ mrisurf.c:8994:27: warning: variable ���l_spring��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8994:19: warning: variable ���l_area��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c:8994:11: warning: variable ���l_dist��� set but not used [-Wunused-but-set-variable] double l_dist, l_area, l_spring, sse, old_sse, delta_t, total_small = 0.0; ^ mrisurf.c: In function ���MRIScomputeTriangleProperties���: mrisurf.c:11337:38: warning: variable ���dz��� set but not used [-Wunused-but-set-variable] float area, angle, dot, cross, dz ; ^ mrisurf.c: In function ���mrisAsynchronousTimeStepNew���: mrisurf.c:11703:21: warning: variable ���dot��� set but not used [-Wunused-but-set-variable] float dist, dot, dx, dy, dz ; ^ mrisurf.c:11703:15: warning: variable ���dist��� set but not used [-Wunused-but-set-variable] float dist, dot, dx, dy, dz ; ^ mrisurf.c: In function ���MRISreadCTABFromAnnotationIfPresent���: mrisurf.c:14207:9: warning: variable ���skip��� set but not used [-Wunused-but-set-variable] int skip,j,num; ^ mrisurf.c: In function ���MRISisCTABPresentInAnnotation���: mrisurf.c:14283:9: warning: variable ���skip��� set but not used [-Wunused-but-set-variable] int skip,j,num; ^ mrisurf.c: In function ���MRISreadValuesIntoArray���: mrisurf.c:14459:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���MRISreadValuesBak���: mrisurf.c:14656:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���MRISreadImagValues���: mrisurf.c:14702:9: warning: variable ���lat��� set but not used [-Wunused-but-set-variable] float lat; ^ mrisurf.c: In function ���mrisComputeQuadraticCurvatureSSE���: mrisurf.c:16339:20: warning: variable ���a��� set but not used [-Wunused-but-set-variable] float ui, vi, a, e ; ^ mrisurf.c: In function ���mrisRemoveEdge���: mrisurf.c:17180:17: warning: variable ���v2��� set but not used [-Wunused-but-set-variable] VERTEX *v1, *v2 ; ^ mrisurf.c: In function ���MRISinflateBrain���: mrisurf.c:18603:58: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double delta_t = 0.0, rms_height, desired_rms_height, sse, l_dist ; ^ mrisurf.c: In function ���MRISinflateToSphere���: mrisurf.c:18782:44: warning: variable ���sse��� set but not used [-Wunused-but-set-variable] double delta_t = 0.0, rms_radial_error, sse, base_dt ; ^ mrisurf.c: In function ���mrisLabelVertices���: mrisurf.c:19878:22: warning: variable ���d��� set but not used [-Wunused-but-set-variable] float xd, yd, zd, d ; ^ mrisurf.c: In function ���mrisComputeDuraError���: mrisurf.c:20660:17: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:20660:14: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:20660:11: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c: In function ���mrisComputeMaxSpringTerm���: mrisurf.c:21968:16: warning: variable ���n��� set but not used [-Wunused-but-set-variable] int vno, n, m, m_max ; ^ mrisurf.c: In function ���mrisComputeDistanceTerm���: mrisurf.c:22627:32: warning: variable ���vsmooth��� set but not used [-Wunused-but-set-variable] float d0, dt, delta, nc, vsmooth = 1.0 ; ^ mrisurf.c:22554:26: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] float l_dist, scale, max_del, norm ; ^ mrisurf.c: In function ���mrisComputeDistanceError���: mrisurf.c:23257:33: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] double dist_scale, sse_dist, max_del ; ^ mrisurf.c:23256:16: warning: variable ���max_v��� set but not used [-Wunused-but-set-variable] int vno, max_v, max_n, err_cnt, max_errs ; ^ mrisurf.c: In function ���mrisComputeNonlinearDistanceSSE���: mrisurf.c:23443:47: warning: variable ���max_del��� set but not used [-Wunused-but-set-variable] double dist_scale, sse_dist, delta, v_sse, max_del, ratio ; ^ mrisurf.c:23442:30: warning: variable ���max_v��� set but not used [-Wunused-but-set-variable] int vno, n, nvertices, max_v, max_n ; ^ mrisurf.c: In function ���ashburnerTriangleEnergy���: mrisurf.c:23905:52: warning: variable ���m_V��� set but not used [-Wunused-but-set-variable] static MATRIX *m_x, *m_x_inv, *m_y, *m_J, *m_U, *m_V, *m_m, ^ mrisurf.c:23905:46: warning: variable ���m_U��� set but not used [-Wunused-but-set-variable] static MATRIX *m_x, *m_x_inv, *m_y, *m_J, *m_U, *m_V, *m_m, ^ mrisurf.c: In function ���mrisComputeThicknessNormalEnergy���: mrisurf.c:24187:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeThicknessParallelEnergy���: mrisurf.c:24363:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeAshburnerTriangleEnergy���: mrisurf.c:24426:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno = -1 ; ^ mrisurf.c: In function ���mrisComputeThicknessSpringTerm���: mrisurf.c:25045:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeRepulsiveEnergy���: mrisurf.c:25323:21: warning: variable ���min_vno��� set but not used [-Wunused-but-set-variable] int vno, num, min_vno, i, n ; ^ mrisurf.c:25323:16: warning: variable ���num��� set but not used [-Wunused-but-set-variable] int vno, num, min_vno, i, n ; ^ mrisurf.c: In function ���mrisComputeThicknessSmoothnessTerm���: mrisurf.c:25556:29: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c:25556:26: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c:25556:23: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float dx, dy, dz, x, y, z, dn, d0, vx, vy, vz, delta ; ^ mrisurf.c: In function ���mrisComputeNonlinearSpringTerm���: mrisurf.c:26142:23: warning: variable ���sse_spring��� set but not used [-Wunused-but-set-variable] double area_scale, sse_spring, E, F, f, rmin, rmax ; ^ mrisurf.c:26142:11: warning: variable ���area_scale��� set but not used [-Wunused-but-set-variable] double area_scale, sse_spring, E, F, f, rmin, rmax ; ^ mrisurf.c: In function ���MRIScomputeMetricProperties���: mrisurf.c:27362:12: warning: variable ���old_area��� set but not used [-Wunused-but-set-variable] double old_area ; ^ mrisurf.c: In function ���mrisComputeMetricPropertiesCUDA���: mrisurf.c:27462:12: warning: variable ���old_area��� set but not used [-Wunused-but-set-variable] double old_area ; ^ mrisurf.c: In function ���MRISwritePatchAscii���: mrisurf.c:29083:43: warning: variable ���type��� set but not used [-Wunused-but-set-variable] int vno, fno, n, nvertices, nfaces, type ; ^ mrisurf.c: In function ���mrisReadGeoFile���: mrisurf.c:29290:43: warning: variable ���patch��� set but not used [-Wunused-but-set-variable] int vno, fno, n, nvertices, nfaces, patch, vertices_per_face, nedges ; ^ mrisurf.c: In function ���mrisReadGeoFilePositions���: mrisurf.c:29371:35: warning: variable ���patch��� set but not used [-Wunused-but-set-variable] int vno, nvertices, nfaces, patch, vertices_per_face, nedges ; ^ mrisurf.c: In function ���mrisComputeCorrelationError���: mrisurf.c:29868:17: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno ; ^ mrisurf.c: In function ���mrisComputeVectorCorrelationTerm���: mrisurf.c:30253:35: warning: variable ���vm1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:30: warning: variable ���vp1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:25: warning: variable ���um1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c:30253:20: warning: variable ���up1��� set but not used [-Wunused-but-set-variable] double du, dv, up1, um1, vp1, vm1, delta, src, target, mag, max_mag,l_corr; ^ mrisurf.c: In function ���mrisComputePolarCorrelationTerm���: mrisurf.c:30540:17: warning: variable ���fno��� set but not used [-Wunused-but-set-variable] int vno, fno ; ^ mrisurf.c: In function ���MRISuseCurvatureStretch���: mrisurf.c:33225:40: warning: variable ���curv��� set but not used [-Wunused-but-set-variable] float kmin, kmax, dist, dist_orig, curv, dist_scale, max_stretch, stretch ; ^ mrisurf.c: In function ���MRISremoveCompressedRegions���: mrisurf.c:33848:21: warning: variable ���delta_t��� set but not used [-Wunused-but-set-variable] double delta_t, l_spring, l_convex, l_max_spring ; ; ^ mrisurf.c: In function ���MRISpositionSurfaces���: mrisurf.c:33954:37: warning: variable ���l_intensity��� set but not used [-Wunused-but-set-variable] dt, l_intensity, base_dt, last_sse, rms, mle_sse, last_mle_sse, ^ mrisurf.c: In function ���MRISpositionSurface���: mrisurf.c:34318:37: warning: variable ���last_sse��� set but not used [-Wunused-but-set-variable] l_intensity, base_dt, last_sse,last_rms, max_mm; ^ mrisurf.c: In function ���MRISpositionSurface_mef���: mrisurf.c:34803:15: warning: variable ���last_sse��� set but not used [-Wunused-but-set-variable] sse, last_sse, delta_rms ; ^ mrisurf.c: In function ���mrisDirectionTriangleIntersection���: mrisurf.c:36220:30: warning: variable ���lastz��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36220:23: warning: variable ���lasty��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36220:16: warning: variable ���lastx��� set but not used [-Wunused-but-set-variable] static float lastx, lasty, lastz = -1 ; ^ mrisurf.c:36219:16: warning: variable ���last_bucket��� set but not used [-Wunused-but-set-variable] static MHBT *last_bucket = NULL ; ^ mrisurf.c: In function ���MRIScomputeInvertedGrayWhiteBorderValues���: mrisurf.c:38462:32: warning: variable ���inward_increasing��� set but not used [-Wunused-but-set-variable] int total_vertices, vno, inward_increasing, ngray, nwhite ; ^ mrisurf.c: In function ���MRIScomputeMaxGradBorderValues���: mrisurf.c:38634:42: warning: variable ���std_wm_val��� set but not used [-Wunused-but-set-variable] float min_wm_val, mean_wm_val, std_wm_val ; ^ mrisurf.c:38567:14: warning: variable ���box��� set but not used [-Wunused-but-set-variable] MRI_REGION box ; ^ mrisurf.c: In function ���MRIScomputeMaxGradBorderValuesPial���: mrisurf.c:38864:14: warning: variable ���box��� set but not used [-Wunused-but-set-variable] MRI_REGION box ; ^ mrisurf.c: In function ���MRIScomputeInvertedPialBorderValues���: mrisurf.c:39321:28: warning: variable ���inward_increasing��� set but not used [-Wunused-but-set-variable] int total_vertices, vno, inward_increasing, ngray, ncsf ; ^ mrisurf.c: In function ���mrisRmsValError���: mrisurf.c:40653:27: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c:40653:23: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c:40653:19: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c: In function ���mrisRmsValError_mef���: mrisurf.c:40717:19: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, n, max_vno; //, xv, yv, zv ; ^ mrisurf.c: In function ���MRISstoreAnalyticDistances���: mrisurf.c:40933:24: warning: variable ���smean_orig_error��� set but not used [-Wunused-but-set-variable] smean_error, smean_orig_error ; ^ mrisurf.c:40932:32: warning: variable ���mean_orig_error��� set but not used [-Wunused-but-set-variable] double pct_orig, pct, mean, mean_orig_error, mean_error, ^ mrisurf.c: In function ���mrisComputeIntensityError���: mrisurf.c:41459:17: warning: variable ���z��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:41459:14: warning: variable ���y��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c:41459:11: warning: variable ���x��� set but not used [-Wunused-but-set-variable] float x, y, z ; ^ mrisurf.c: In function ���mrisDivideFace���: mrisurf.c:43597:11: warning: variable ���v1��� set but not used [-Wunused-but-set-variable] VERTEX *v1, *v2, *v3, *vnew ; ^ mv -f .deps/libutils_cuda_a-mrishash.Tpo .deps/libutils_cuda_a-mrishash.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mrisutils.o -MD -MP -MF .deps/libutils_cuda_a-mrisutils.Tpo -c -o libutils_cuda_a-mrisutils.o `test -f 'mrisutils.c' || echo './'`mrisutils.c mrisurf.c: In function ���MRISmarkPatchVertices���: mrisurf.c:48580:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���computeVolumeLikelihood���: mrisurf.c:48718:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c:48712:21: warning: variable ���gray_mean��� set but not used [-Wunused-but-set-variable] double white_mean,gray_mean,white_vol,gray_vol; ^ mrisurf.c:48712:10: warning: variable ���white_mean��� set but not used [-Wunused-but-set-variable] double white_mean,gray_mean,white_vol,gray_vol; ^ mrisurf.c:48710:36: warning: variable ���delta��� set but not used [-Wunused-but-set-variable] double int_g,int_w,val,val2,dval,delta,delta_ll; ^ mrisurf.c: In function ���MRIScomputeFitness���: mrisurf.c:48835:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���saveSegmentation���: mrisurf.c:49763:11: warning: variable ���b��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c:49763:9: warning: variable ���g��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c:49763:7: warning: variable ���r��� set but not used [-Wunused-but-set-variable] int r,g,b,rgb[10]; ^ mrisurf.c: In function ���retessellateDefect���: mrisurf.c:52844:24: warning: variable ���max_added��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index,ndiscarded; ^ mrisurf.c:52844:17: warning: variable ���max_i��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index,ndiscarded; ^ mrisurf.c: In function ���MRISmarkAmbiguousVertices���: mrisurf.c:56725:10: warning: variable ���area_scale��� set but not used [-Wunused-but-set-variable] double area_scale ; ^ mrisurf.c: In function ���mrisSegmentDefect���: mrisurf.c:57026:19: warning: variable ���vadded��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn,*vadded ; ^ mrisurf.c:57025:49: warning: variable ���vno1��� set but not used [-Wunused-but-set-variable] int vlist[200000], i, j,n, nfilled ,nadded,vno1,m; ^ mrisurf.c: In function ���MRISbinarizeVolume���: mrisurf.c:58571:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c: In function ���MRIScomputeDistanceVolume���: mrisurf.c:59666:8: warning: variable ���ffrom��� set but not used [-Wunused-but-set-variable] int *ffrom, *fto,*vfrom, *vto; ^ mrisurf.c:59658:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c: In function ���mrisComputeDefectMRILogUnlikelihood���: mrisurf.c:60324:13: warning: variable ���valu��� set but not used [-Wunused-but-set-variable] float val,valu,val0,val1,val2; ^ mrisurf.c:60309:7: warning: variable ���tp��� set but not used [-Wunused-but-set-variable] TP *tp; ^ mrisurf.c: In function ���mrisFindOptimalDefectMapping���: mrisurf.c:63004:38: warning: variable ���first_border_vertex��� set but not used [-Wunused-but-set-variable] int vno,n,m,i, first_inside_vertex,first_border_vertex; ^ mrisurf.c: In function ���mrisTessellateDefect���: mrisurf.c:63440:34: warning: variable ���val0��� set but not used [-Wunused-but-set-variable] double x, y, z, xv, yv, zv, val0, val, ^ mrisurf.c: In function ���mrisCountIntersectingFaces���: mrisurf.c:64336:21: warning: variable ���scale��� set but not used [-Wunused-but-set-variable] double d0,d1,d2,d,scale,SCALE_FACTOR; ^ mrisurf.c: In function ���mrisComputeRandomRetessellation���: mrisurf.c:66004:37: warning: variable ���last_euthanasia��� set but not used [-Wunused-but-set-variable] int *overlap ,ngenerations,nbests,last_euthanasia; ^ mrisurf.c:66003:21: warning: variable ���best_i��� set but not used [-Wunused-but-set-variable] int niters,m, tmp,best_i, i,j, k,noverlap ; ^ mrisurf.c: In function ���mrisRetessellateDefect���: mrisurf.c:66486:24: warning: variable ���max_added��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index ; ^ mrisurf.c:66486:17: warning: variable ���max_i��� set but not used [-Wunused-but-set-variable] int i, j, max_i, max_added, nadded, index ; ^ mrisurf.c: In function ���mrisAddAllDefectFaces���: mrisurf.c:67951:11: warning: variable ���edge��� set but not used [-Wunused-but-set-variable] EDGE edge ; ^ mrisurf.c: In function ���MRISmarkOrientationChanges���: mrisurf.c:68786:33: warning: variable ���d1��� set but not used [-Wunused-but-set-variable] int face1,face2,vn0,p,vn1,vn2,d1,d2,count; ^ mrisutils.c: In function ���mrisRmsValError���: mrisutils.c:590:27: warning: variable ���zv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisutils.c:590:23: warning: variable ���yv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisutils.c:590:19: warning: variable ���xv��� set but not used [-Wunused-but-set-variable] int vno, n, xv, yv, zv ; ^ mrisurf.c: In function ���MRISdilateConfined���: mrisurf.c:70230:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisurf.c: In function ���MRISfbirnMask_SFG_Cing���: mrisurf.c:70312:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisurf.c: In function ���MRISfbirnMask_MOF_RACing���: mrisurf.c:70370:11: warning: variable ���vtx��� set but not used [-Wunused-but-set-variable] VERTEX *vtx; ^ mrisutils.c: In function ���MRISmatchSurfaceToLabel���: mrisutils.c:1167:47: warning: variable ���delta_t��� set but not used [-Wunused-but-set-variable] double sse,last_sse,rms,last_rms,base_dt,dt,delta_t=0.0; ^ mrisurf.c: In function ���MRISreadNewCurvatureFile���: mrisurf.c:72823:17: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int k,vnum,fnum, vals_per_vertex ; ^ mrisurf.c: In function ���MRISreadNewCurvatureIntoArray���: mrisurf.c:72954:17: warning: variable ���fnum��� set but not used [-Wunused-but-set-variable] int k,vnum,fnum; ^ mrisurf.c: In function ���MRISpaintVolume���: mrisurf.c:73027:32: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisutils.c: In function ���MRISfindPath���: mrisutils.c:2256:21: warning: variable ���vu_z��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisutils.c:2256:15: warning: variable ���vu_y��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisutils.c:2256:9: warning: variable ���vu_x��� set but not used [-Wunused-but-set-variable] float vu_x, vu_y, vu_z; ^ mrisutils.c:2254:7: warning: variable ���num_path��� set but not used [-Wunused-but-set-variable] int num_path = 0; ^ mrisutils.c: In function ���MRIScomputeFlattenedVolume���: mrisutils.c:2377:53: warning: variable ���outside_samples��� set but not used [-Wunused-but-set-variable] int uk, vk, ui, vi, whalf = 3, nv, wm_samples, outside_samples ; ^ mrisutils.c:2377:41: warning: variable ���wm_samples��� set but not used [-Wunused-but-set-variable] int uk, vk, ui, vi, whalf = 3, nv, wm_samples, outside_samples ; ^ mrisurf.c:73027:24: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisurf.c:73027:17: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int vno, width, height, depth ; ^ mrisurf.c: In function ���MRISsmoothMRIFast���: mrisurf.c:73978:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISsmoothMRIFastD���: mrisurf.c:74152:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISsmoothMRIFastFrame���: mrisurf.c:74301:11: warning: variable ���v��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn; ^ mrisurf.c: In function ���MRISgaussianSmooth���: mrisurf.c:76201:10: warning: variable ���err��� set but not used [-Wunused-but-set-variable] int n, err, nXNbrs, *XNbrVtxNo, frame; ^ mrisurf.c: In function ���MRISdistSphere���: mrisurf.c:76627:10: warning: variable ���err��� set but not used [-Wunused-but-set-variable] int n, err, *nXNbrs, nXNbrsMax; ^ mrisurf.c: In function ���MRISaverageMarkedVertexPositions���: mrisurf.c:77605:10: warning: variable ���nmarked��� set but not used [-Wunused-but-set-variable] int nmarked ; ^ mrisurf.c: In function ���MRISfillWhiteMatterInterior���: mrisurf.c:78628:11: warning: variable ���vox_volume��� set but not used [-Wunused-but-set-variable] double vox_volume ; ^ mrisurf.c: In function ���FACES_aroundVertex_reorder���: mrisurf.c:79929:9: warning: variable ���b_borderFound��� set but not used [-Wunused-but-set-variable] short b_borderFound = 0; ^ mrisurf.c: In function ���FACES_angleNormal_find���: mrisurf.c:80008:19: warning: variable ���pv_crossIJ��� set but not used [-Wunused-but-set-variable] static VECTOR* pv_crossIJ = NULL; // Cross product of input vectors ^ mrisurf.c: In function ���mrisComputeSurfaceRepulsionEnergy���: mrisurf.c:80716:22: warning: variable ���max_dot��� set but not used [-Wunused-but-set-variable] float max_scale, max_dot ; ^ mrisurf.c:80714:16: warning: variable ���max_vno��� set but not used [-Wunused-but-set-variable] int vno, max_vno, i ; ^ mrisurf.c: In function ���MRISsampleFace���: mrisurf.c:81894:15: warning: variable ���ret��� set but not used [-Wunused-but-set-variable] int n, ret ; ^ mrisurf.c: In function ���MRISsampleFaceNormal���: mrisurf.c:81928:35: warning: variable ���xc��� set but not used [-Wunused-but-set-variable] float d, dtotal, dx, dy, dz, xc, yc, zc ; ^ mrisurf.c: In function ���MRISlaplacian���: mrisurf.c:82104:15: warning: variable ���vn��� set but not used [-Wunused-but-set-variable] VERTEX *v, *vn ; ^ mrisurf.c:82103:24: warning: variable ���num��� set but not used [-Wunused-but-set-variable] int vno, vno2, i, num, n ; ^ mrisurf.c: In function ���MRISsampleValue���: mrisurf.c:82146:15: warning: variable ���dy1��� set but not used [-Wunused-but-set-variable] dx1, dy1, dx2, dy2, e1x, e1y, e1z, e2x, e2y, e2z, x0, y0, a0, a1, a2, ^ mrisurf.c: In function ���MRIcomputeLaminarVolumeFractions���: mrisurf.c:83202:26: warning: variable ���depth��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c:83202:18: warning: variable ���height��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c:83202:11: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int width, height, depth, nvox ; ^ mrisurf.c: In function ���vlst_loglikelihood2D���: mrisurf.c:83535:45: warning: variable ���dist��� set but not used [-Wunused-but-set-variable] double ll = 0.0, dot, dx, dy, dz, pval, dist ; ^ mrisurf.c: In function ���mrisComputePosterior2DTerm���: mrisurf.c:85164:14: warning: variable ���best_dn��� set but not used [-Wunused-but-set-variable] double best_dn = 0, best_ll = -1e10 ; ^ mv -f .deps/libutils_cuda_a-mrisp.Tpo .deps/libutils_cuda_a-mrisp.Po gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../include/dicom -I../xml2 -I../include/NrrdIO -DTEEM_DIO=0 -DTEEM_32BIT=0 -DTEEM_QNANHIBIT=1 -DTEEM_ENDIAN=1234 -I../jpeg -I../tiff -I../expat -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Algorithms -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/BasicFilters -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Common -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/IO -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Numerics/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Review/Statistics -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/SpatialObject -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/itk/current/include/InsightToolkit/Utilities -DHAVE_ITK_LIBS -I../glut -DHAVE_GLUT_LIBS -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/core -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/vcl -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/vxl/current/include/vxl/v3p/netlib/opt -I/usr/local/cuda/include -DHAVE_ZLIB -g -O3 -msse2 -mfpmath=sse -Wall -DUSE_SSE_MATHFUN -fopenmp -DHAVE_OPENMP -m64 -DLinux -DANSI -fdata-sections -ffunction-sections -Wl,--gc-sections -I/home/scanlab/Desktop/Derek/centos6-x86_64-packages/mni/current/include -DFS_CUDA -I/usr/local/cuda/include -DGCAMORPH_ON_GPU -MT libutils_cuda_a-mri_tess.o -MD -MP -MF .deps/libutils_cuda_a-mri_tess.Tpo -c -o libutils_cuda_a-mri_tess.o `test -f 'mri_tess.c' || echo './'`mri_tess.c mri_tess.c: In function ���freeTesselationParms���: mri_tess.c:360:13: warning: variable ���width��� set but not used [-Wunused-but-set-variable] int depth,width,height; ^ mri_tess.c: In function ���saveTesselation���: mri_tess.c:529:23: warning: variable ���zz1��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:19: warning: variable ���yy0��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:15: warning: variable ���xx1��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:12: warning: variable ���ps��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c:529:9: warning: variable ���st��� set but not used [-Wunused-but-set-variable] float st,ps,xx1,yy0,zz1; ^ mri_tess.c: In function ���make_surface_with_connectivity���: mri_tess.c:1062:39: warning: variable ���label��� set but not used [-Wunused-but-set-variable] int imnr,i,j,k,f_pack,v_ind,f,a,b,c,label,nlabels,comp,m; ^ Makefile:4542: recipe for target 'libutils_cuda_a-mrisurf.o' failed make[3]: *** [libutils_cuda_a-mrisurf.o] Error 1 make[3]: *** Waiting for unfinished jobs.... mv -f .deps/libutils_cuda_a-mriset.Tpo .deps/libutils_cuda_a-mriset.Po mv -f .deps/libutils_cuda_a-mrisutils.Tpo .deps/libutils_cuda_a-mrisutils.Po mv -f .deps/libutils_cuda_a-mri_tess.Tpo .deps/libutils_cuda_a-mri_tess.Po make[3]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/utils' Makefile:6185: recipe for target 'all-recursive' failed make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer/utils' Makefile:1052: recipe for target 'all-recursive' failed make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory '/home/scanlab/Desktop/Derek/freesurfer' Makefile:961: recipe for target 'all' failed make: *** [all] Error 2