Yes, that is part of the recon-all pipeline (actually we have 3 separate
topology correction procedures, two for the surface and one for the
volume)

cheers
Bruce
On Sat, 23 Sep 2017, Fereshte wrote:

> Dear FreeSurfer Developers Is it possible to correct topological defects automatically in
> FreeSurfer? ( not correcting manually with Recon Edit)
> Thank you.
>
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