External Email - Use Caution        

Hi Vânia,

You can use this repository to convert some FreeSurfer outputs to dicom.
https://github.com/corticometrics/fs2dicom

Unfortunately, the aparc+aseg is not supported at this time, only the
aseg.mgz.

-Paul

On Thu, Oct 3, 2019 at 9:57 AM Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:

Hi Vânia

you can convert the aparc+aseg.mgz to nifti and find something that goes
from there to dicom, but we don't at the moment support writing dicom,
although I think Paul (ccd) has worked on it and might have something to
add

cheers
Bruce


On Thu, 3 Oct 2019, Correia
de Aguiar, V.M. wrote:

>
>         External Email - Use Caution        
>
> Dear Freesurfer developers,
>
> Is it possible to export the ROI segmentations that are stored
> in ?h.aparc.a2009s.annot or ?h.aparc.annot files into the header of the
> DICOM file? I would like to open those files with corresponding
> segmentations in RayStation.
>
> Many thanks for your time.
> Regards,
>
> Vânia de Aguiar, PhD
> Assistant Professor in Neurolinguistics
> University of Groningen
> Faculty of Arts
>
> Oude Kijk in 't Jatstraat 26
> Room 1315.0408
> 9712 EK, Groningen
> The Netherlands
>
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