I'll let Stefano (cc'ed) weigh in.External Email - Use Caution
Hi,Once SAMSEG has finished segmenting T2 lesions, other than trying different --threshold flags, any way to manually modify them?
Not sure what you mean here. There is an etiv value that is output in the samseg folder
Can --eTIV be added to SAMSEG?
No, not yet
In Samseg, can brainstem be segmented into parts, such as medulla, pons, mid brain like through recon all?
I have not tried this, but you can try
Can corpus callosum be segmented separately in Samseg?
Sorry for all the questions.
Many thanks.
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