I think it usually means it ran out of memory

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Gonzalo Rojas Costa
Sent: Thursday, March 16, 2023 2:01 PM
To: Iglesias Gonzalez, Juan E. <JIGLESIASGONZALEZ@mgh.harvard.edu>
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] CT and mri_synthsr

 

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Dear Juan:

 

  I tested mri_synthsr using three different CT images using the threshold (80 value) that you told me some days ago. The first works ok, but with the other 2, I got the following error:

 

developer@developer-VirtualBox:~$ mri_synthseg --i /home/developer/Documents/OAS31367/sub-OAS31367_sess-d0142_run-01_CT_0_80.nii.gz --o /home/developer/Documents/OAS31367 --cpu
SynthSeg 2.0
using CPU, hiding all CUDA_VISIBLE_DEVICES
using 1 thread
predicting 1/1
Killed

 

  What does "Killed" mean? Any log file?

 

  Sincerely,

 

 

 

 

Gonzalo Rojas Costa
Department of Radiology
ClĂ­nica las Condes
Lo Fontecilla 441, Las Condes, Santiago, Chile.
Tel: 56-2-2105170
Cel: 56-9-97771785