Dear Freesurfer Experts,

In qdec for question:
"Does the average thickness differ between X and Y"
we received blue colored regions, meaning that thickness for group Y is lower then X ?

We created ROIs for each region, and extracted cortical thickness for each ROI for each subject using mris_anatomical_stats.

in results: for each ROI, mean cortical thickness of Y group are higher then X.

is it a mistake, or the question was misunderstood ?

Sincerely,
Alex.