Hi Fereshte,


Could you please clarify what you mean by "obtain the surface label"?


Thanks,

Emma


---------

Emma Boyd

Research Technician II

Laboratory for Computational Neuroimaging

Martinos Center for Biomedical Imaging



From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Fereshte <fereshte.ramezani@gmail.com>
Sent: Thursday, September 21, 2017 10:26 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Mris_volume
 
Hi Emma
Are there any ways to obtain the surface label then? 
Thank you!
On Wed, Sep 20, 2017 at 5:15 PM Boyd, Emma <EBOYD2@mgh.harvard.edu> wrote:

Hi Fereshte,


mris_volume does not create any output files, that number you see in the terminal is the total volume of a given closed surface.

Try running mris_volume -v <surface_file> instead and you will see something like this in your terminal:


reading <surface_file>...
surface file read in.
Volume computation took 0 minutes and 1 seconds.
total volume surrounded by the surface is 381271

Emma



From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Fereshte <fereshte.ramezani@gmail.com>
Sent: Wednesday, September 20, 2017 1:45:17 AM
To: Freesurfer support list
Subject: [Freesurfer] Mris_volume
 
Dear FreeSurfer Developers 
Using "mris_volume surface_file_name " now i can't see any output files and 381271.851642 is shown in the command terminal, i have no idea what the problem is. Could you please help? 
Thank you! 

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.