Fri Aug 2 09:19:46 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui /usr/local/freesurfer/bin/trac-all -prep -bedp -path -c tracula02ST.txt Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62188828 3714412 0 611152 57172808 -/+ buffers/cache: 4404868 61498372 Swap: 67032060 0 67032060 ######################################## Program versions: $Id: trac-all,v 1.22.2.6 2011/05/24 06:49:09 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:19:46-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49 2011/03/06 23:38:41 greve Exp $ $Id: mri_cvs_register,v 1.15.2.8 2011/05/23 12:37:47 lzollei Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:19:46-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:19:46-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:19:46-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:19:46-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 New invocation of trac-paths dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62206604 3696636 0 611152 57187152 -/+ buffers/cache: 4408300 61494940 Swap: 67032060 0 67032060 #------------------------------------- /usr/local/freesurfer/bin/trac-paths #------------------------------------- #@# Path reconstruction Fri Aug 2 09:19:46 BST 2013 /usr/local/freesurfer/bin/dmri_paths --outdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fmajor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fminor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slft_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slft_PP_avg33_mni_bbr --dwi /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/dwi.nii.gz --grad /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvecs --bval /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvals --mask /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lowb_brain_mask.nii.gz --bpdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz --roi2 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz --reg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/xfms/diff2mni.bbr.mat --init /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.txt --nprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnids --lprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids --seg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 7500 --nu 0 --nk 5 New invocation of trac-all Fri Aug 2 09:33:42 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui /usr/local/freesurfer/bin/trac-all -prep -bedp -path -c tracula02ST.txt Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62204752 3698488 0 611468 57190744 -/+ buffers/cache: 4402540 61500700 Swap: 67032060 0 67032060 ######################################## Program versions: $Id: trac-all,v 1.22.2.6 2011/05/24 06:49:09 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:33:42-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49 2011/03/06 23:38:41 greve Exp $ $Id: mri_cvs_register,v 1.15.2.8 2011/05/23 12:37:47 lzollei Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:33:42-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:33:42-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:33:42-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:33:42-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 New invocation of trac-paths dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62207080 3696160 0 611476 57190736 -/+ buffers/cache: 4404868 61498372 Swap: 67032060 0 67032060 New invocation of trac-all Fri Aug 2 09:34:24 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui /usr/local/freesurfer/bin/trac-all -prep -bedp -path -c tracula02ST.txt Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62206028 3697212 0 611484 57190736 -/+ buffers/cache: 4403808 61499432 Swap: 67032060 0 67032060 ######################################## Program versions: $Id: trac-all,v 1.22.2.6 2011/05/24 06:49:09 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:34:24-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49 2011/03/06 23:38:41 greve Exp $ $Id: mri_cvs_register,v 1.15.2.8 2011/05/23 12:37:47 lzollei Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:34:25-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:34:25-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:34:25-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:34:25-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 New invocation of trac-paths dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62207392 3695848 0 611484 57190736 -/+ buffers/cache: 4405172 61498068 Swap: 67032060 0 67032060 #------------------------------------- /usr/local/freesurfer/bin/trac-paths #------------------------------------- #@# Path reconstruction Fri Aug 2 09:34:25 BST 2013 /usr/local/freesurfer/bin/dmri_paths --outdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fmajor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fminor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slft_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slft_PP_avg33_mni_bbr --dwi /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/dwi.nii.gz --grad /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvecs --bval /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvals --mask /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lowb_brain_mask.nii.gz --bpdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz --roi2 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz --reg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/xfms/diff2mni.bbr.mat --init /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.txt --nprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnids --lprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids --seg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 7500 --nu 0 --nk 5 New invocation of trac-all Fri Aug 2 09:43:57 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui /usr/local/freesurfer/bin/trac-all -prep -bedp -path -c tracula02ST.txt Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62280220 3623020 0 611788 57202692 -/+ buffers/cache: 4465740 61437500 Swap: 67032060 0 67032060 ######################################## Program versions: $Id: trac-all,v 1.22.2.6 2011/05/24 06:49:09 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:43:57-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49 2011/03/06 23:38:41 greve Exp $ $Id: mri_cvs_register,v 1.15.2.8 2011/05/23 12:37:47 lzollei Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:43:57-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:43:58-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:43:58-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:43:58-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 New invocation of trac-paths dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62282772 3620468 0 611788 57202692 -/+ buffers/cache: 4468292 61434948 Swap: 67032060 0 67032060 New invocation of trac-all Fri Aug 2 09:44:20 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui /usr/local/freesurfer/bin/trac-all -prep -bedp -path -c tracula02ST.txt Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62282000 3621240 0 611792 57202688 -/+ buffers/cache: 4467520 61435720 Swap: 67032060 0 67032060 ######################################## Program versions: $Id: trac-all,v 1.22.2.6 2011/05/24 06:49:09 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:44:20-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49 2011/03/06 23:38:41 greve Exp $ $Id: mri_cvs_register,v 1.15.2.8 2011/05/23 12:37:47 lzollei Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:44:20-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:44:20-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:44:20-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/02-08:44:20-GMT BuildTimeStamp: May 22 2011 08:23:31 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 New invocation of trac-paths dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 62283476 3619764 0 611792 57202688 -/+ buffers/cache: 4468996 61434244 Swap: 67032060 0 67032060 #------------------------------------- /usr/local/freesurfer/bin/trac-paths #------------------------------------- #@# Path reconstruction Fri Aug 2 09:44:20 BST 2013 /usr/local/freesurfer/bin/dmri_paths --outdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cst_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ilf_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.unc_AS_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fmajor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/fminor_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.atr_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.ccg_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.cab_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slfp_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/lh.slft_PP_avg33_mni_bbr /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dpath/rh.slft_PP_avg33_mni_bbr --dwi /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/dwi.nii.gz --grad /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvecs --bval /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/bvals --mask /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lowb_brain_mask.nii.gz --bpdir /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz --roi2 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz --reg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri/xfms/diff2mni.bbr.mat --init /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.txt /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.txt --nprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnids --lprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/fminor_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsprior /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids --seg /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 7500 --nu 0 --nk 5