Hi,

We managed to avoid getting the error by typing the following in the terminal before the command:
export LC_NUMERIC="en_US.UTF-8"

Best,
Teodora
On Thursday, April 6, 2017, 5:59:05 PM GMT+2, Douglas Greve <greve@nmr.mgh.harvard.edu> wrote:

I think this is a "language" problem in that it is converting the "1.3" into "1,3" and then getting confused. I'm not sure how to fix it, but I think it has to do with the LOCAL setting.


On 4/6/17 5:07 AM, teodora petrova wrote:
Hello,

I would like to correct my glm_fit results for multiple comparisons. 
I am using the following commands, similar to the one in the group analysis tutorial:

mri_glmfit-sim  --glmdir lh.index.glmdir  --cache 1.3 abs  --cwp 0.05  --2spaces
mri_glmfit-sim  --glmdir lh.index.glmdir  --cache 2.0 pos  --cwp 0.05  --2spaces

And receive the following errors:

ERROR:thresh=1,3, must be 1.3, 2.0, 2.3, 3.0, 3.3, 4.0
ERROR:thresh=2,0, must be 1.3, 2.0, 2.3, 3.0, 3.3, 4.0

I am sure I am typing a point, but it is read as a comma. Any ideas why?
Freesurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
Platform: Ubuntu MATE 16.04
Thank you very much!

Regards,
Teodora







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