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Hi Douglas:

   Thanks for your reply.  Please check the attached file for recon-all.log!

Cui

-----原始邮件-----
发件人:"Douglas N. Greve" <dgreve@mgh.harvard.edu>
发送时间:2021-03-17 00:04:43 (星期三)
收件人: freesurfer@nmr.mgh.harvard.edu
抄送:
主题: Re: [Freesurfer] Troubleshooting: Soft Failures

Can you send the recon-all log file?

On 3/9/2021 2:06 AM, 崔鹏程 wrote:

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Hi FreeSurfer experts,

    Recently,  I used Fresurfer's recon-all to process our own T1 MRI brain volumes which is 0.7 m3 isotropic. For most young  brain cases, FS performs very well, the segmention is great. But for almost every elderly brain case, the segmention is inaccurate visibly. The figure is the same slice of T1 data and aseg. mgz , the GM is mislabeled as wm-hypointensities .

    I found some solutions to this problem. But these solutions all require manual editing, which will take a long time. Is there a way to automatically solve this problem by setting some parameters?

    Thank you for your attention and your help!

Cui

  

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