Look at the surface superimposed on the volume along with the AAL segmentation to make sure that it intersects the segmentation at all vertices. You can find the vertex numbers for the holes, and then go specifically to that vertex

On 1/27/2021 6:27 AM, Alberto Del Cerro Leon wrote:

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Hello Freesurfer team, I did an AAL atlas on the surface using mri_vol2surf, however when I look at this overlay there are many holes in the labels with vertices that don't belong to any label. Could u help me with this problem?

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