Ph.D. Candidate

McGill University

Integrated Program in Neuroscience

Psychology

On Wed, Apr 20, 2016 at 12:00 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu> wrote:

nope, you need to give it just the name of the subject and the
hemisphere. Run it with --help for more info

On 04/20/2016 11:35 AM, Trisanna Sprung-Much wrote:
> Hi Doug
>
> I had run mri_cor2label using the --surf option. Is what I did below
> correct?
>
>
> trisanna@kaplan:~$ mri_cor2label --i
> /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz --id 1 --l
> /data-01/trisanna/freesurfer/icbm-102/label/labeltest --surf lh.pial
> $Id: mri_cor2label.c,v 1.12 2011/03/02 00:04:14 nicks Exp $
> Loading mri /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz
> ------- Vox2RAS of input volume -----------
> -1.000 0.000 0.000 84970.500;
> 0.000 0.000 1.000 -0.500;
> 0.000 -1.000 0.000 0.500;
> 0.000 0.000 0.000 1.000;
> Scanning the volume
> Found 1651 label voxels
> Writing label file /data-01/trisanna/freesurfer/icbm-102/label/labeltest
> Centroid: -56170.34 -0.50 0.50
> mri_cor2label completed SUCCESSFULLY
>
> --
> Ph.D. Candidate
> McGill University
> Integrated Program in Neuroscience
> Psychology
>
>
> On Wed, Apr 20, 2016 at 11:18 AM, Douglas N Greve

> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>
> I think the problem is that this is being interpreted as a volume
> label.
> The first column is the surface vertex number which you can see is all
> -1s indicating no vertex. To create a surface label, run mri_cor2label
> with the --surf subject hemi option. Ruopeng, can you add something to
> freeview to handle this case more elegantly?
> doug
>
>
>
> On 04/20/2016 10:42 AM, Trisanna Sprung-Much wrote:
> > Hi Doug and Bruce
> >
> > *This what I get when I run the head command on the label:*
> >
> > trisanna@kaplan:~$ head
> > /data-01/trisanna/freesurfer/icbm-102/label/labeltest.label
> > #!ascii label , from subject lh.pial vox2ras=TkReg
> > 1651
> > -1 -29437.500 -0.500 0.500 0.0000000000
> > -1 -30660.500 -0.500 0.500 0.0000000000
> > -1 -30675.500 -0.500 0.500 0.0000000000
> > -1 -30676.500 -0.500 0.500 0.0000000000
> > -1 -30748.500 -0.500 0.500 0.0000000000
> > -1 -30760.500 -0.500 0.500 0.0000000000
> > -1 -30798.500 -0.500 0.500 0.0000000000
> > -1 -30815.500 -0.500 0.500 0.0000000000
> >
> >
> > *When I re-run freeview without the space you pointed out, I get the
> > following:*
> >
> > trisanna@kaplan:~$ freeview -f
> >
> /data-01/trisanna/freesurfer/icbm-102/surf/lh.pial:label=/data-01/trisanna/freesurfer/icbm-102/label/labeltest.label
> >
> > *** Error in `freeview.bin': double free or corruption (out):
> > 0x0000000028604a50 ***
> > Abort (core dumped)
> >
> >
> > *If I try an already exiting label in the terminal, it works
> perfectly:
> >
> > *trisanna@kaplan:~$ freeview -f
> >
> /data-01/trisanna/freesurfer/icbm-102/surf/lh.pial:label=/data-01/trisanna/freesurfer/icbm-102/label/lh.BA44.label
> >
> > *
> > *
> > best
> >
> > Trisanna
> >
> >
> > --
> > Ph.D. Candidate
> > McGill University
> > Integrated Program in Neuroscience
> > Psychology
> >
> >
> > On Tue, Apr 19, 2016 at 11:11 PM, Douglas Greve
> > <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>

> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>> wrote:
> >

> > Can you load another label, eg, lh.cortex.label? Also, I noticed
> > that there is a space between "label=" and "/data/..." in the
> > command line below. That space should not be there, so if it was
> > there when you ran the command try again without the space.
> >
> >
> > On 4/19/16 9:19 PM, Trisanna Sprung-Much wrote:
> >> Hi Doug
> >>
> >> I tried again in the terminal and got this:
> >> *
> >> trisanna@kaplan:~$ freeview -f
> >> /data-01/trisanna/freesurfer/icbm-102/surf/lh.pial:label=
> >> /data-01/trisanna/freesurfer/icbm-102/label/labeltest.label *
> >> [0]PETSC ERROR:
> >>
> ------------------------------------------------------------------------
> >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation
> >> Violation, probably memory access out of range
> >> [0]PETSC ERROR: Try option -start_in_debugger or
> >> -on_error_attach_debugger
> >> [0]PETSC ERROR: or see
> >>
> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC
> >> ERROR: or try http://valgrind.org on linux or man libgmalloc on
> >> Apple to find memory corruption errors
> >> [0]PETSC ERROR: configure using --with-debugging=yes,
> recompile,
> >> link, and run
> >> [0]PETSC ERROR: to get more information on the crash.
> >> [0]PETSC ERROR: --------------------- Error Message
> >> ------------------------------------
> >> [0]PETSC ERROR: Signal received!
> >> [0]PETSC ERROR:
> >>
> ------------------------------------------------------------------------
> >> [0]PETSC ERROR: Petsc Release Version 2.3.3, Patch 13, Thu
> May 15
> >> 17:29:26 CDT 2008 HG revision:
> >> 4466c6289a0922df26e20626fd4a0b4dd03c8124
> >> [0]PETSC ERROR: See docs/changes/index.html for recent updates.
> >> [0]PETSC ERROR: See docs/faq.html for hints about trouble
> shooting.
> >> [0]PETSC ERROR: See docs/index.html for manual pages.
> >> [0]PETSC ERROR:
> >>
> ------------------------------------------------------------------------
> >> [0]PETSC ERROR: Unknown Name on a linux-gnu named kaplan by
> >> trisanna Tue Apr 19 21:13:58 2016
> >> [0]PETSC ERROR: Libraries linked from
> >>
> /autofs/space/lyon_006/pubsw/Linux2-2.3-x86_64/packages/petsc/2.3.3-p13/src/petsc-2.3.3-p13/lib/linux-gnu-c-opt
> >> [0]PETSC ERROR: Configure run at Tue Aug 10 15:01:59 2010
> >> [0]PETSC ERROR: Configure options --with-debugging=no
> >> --with-cc=gcc --with-fc=g77 --download-f-blas-lapack=0
> >> --download-mpich=1 --with-mpi=1 --with-x=0
> >> --with-gnu-copyright-code=0 --with-shared=0 COPTFLAGS=-O3
> >> CXXOPTFLAGS=-O3 FOPTFLAGS=-O3
> >> [0]PETSC ERROR:
> >>
> ------------------------------------------------------------------------
> >> [0]PETSC ERROR: User provided function() line 0 in unknown
> >> directory unknown file
> >> [unset]: aborting job:
> >> application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0
> >>
> >>
> >> --
> >> Ph.D. Candidate
> >> McGill University
> >> Integrated Program in Neuroscience
> >> Psychology
> >>
> >>
> >> On Tue, Apr 19, 2016 at 8:59 PM, Trisanna Sprung-Much
> >> <trisanna.sprung-much@mail.mcgill.ca
> <mailto:trisanna.sprung-much@mail.mcgill.ca>

> >> <mailto:trisanna.sprung-much@mail.mcgill.ca
> <mailto:trisanna.sprung-much@mail.mcgill.ca>>> wrote:
> >>
> >> Hi Doug
> >>
> >> I thought this was the case as well but when I try manually
> >> in Freeview and select the correct label, Freeview crashes
> >> and gives this error in the terminal:
> >>
> >> trisanna@kaplan:~$ freeview
> >> *** Error in `freeview.bin': double free or corruption
> (out):
> >> 0x0000000029080920 ***
> >> Abort (core dumped)
> >>
> >>
> >> --
> >> Ph.D. Candidate
> >> McGill University
> >> Integrated Program in Neuroscience
> >> Psychology
> >>
> >>
> >> On Tue, Apr 19, 2016 at 6:17 PM, Douglas N Greve
> >> <greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>> wrote:
> >>

> >> I don't think that is the problem. The problem is
> that it
> >> cannot find
> >> the file. Try giving it the whole path
> >>
> >> On 04/19/2016 05:45 PM, Bruce Fischl wrote:
> >> > Hi Trisanna
> >> >
> >> > if your output is .mgz it isn't a label file. Labels
> >> are stored in
> >> > .label names and are text files. The .mgz is a scalar
> >> field over the
> >> > surface (that is, a vector with a single value at
> each
> >> surface
> >> > location). In freeview you can view it as:
> >> >
> >> > freeview -f lh.inflated:overlay=surfaceoverlay.mgz
> >> >
> >> >
> >> > cheers
> >> > Bruce
> >> >
> >> > On Tue, 19 Apr 2016, Trisanna Sprung-Much wrote:
> >> >
> >> >> Hi Doug
> >> >>
> >> >> So I ran mri_vol2surf and generated my .mgz surface
> >> overlay using
> >> >> --regheader as you suggested. I than ran
> mri_cor2label
> >> using that
> >> >> .mgz file.
> >> >> This also completed successfully. However, when
> I then
> >> try to open
> >> >> the pial
> >> >> surface and the corresponding new label in freeview,
> >> it says it
> >> >> cannot read
> >> >> the label. Below is what I ran. I tried the same
> thing
> >> for the inflated
> >> >> surface.
> >> >>
> >> >> I put labelid as "1" as I was unsure as to what to
> >> put. Could this have
> >> >> affected the label creation?
> >> >>
> >> >> Trisanna
> >> >>
> >> >>
> >> >> trisanna@kaplan:~$ mri_vol2surf --mov
> >> >>
> /data-01/trisanna/freesurfer/icbm-102/mri/labels5.mnc --o
> >> >>
> >> /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz
> >> --regheader
> >> >> icbm-102 --hemi lh --surf pial
> >> >> srcvol =
> >> /data-01/trisanna/freesurfer/icbm-102/mri/labels5.mnc
> >> >> srcreg unspecified
> >> >> srcregold = 0
> >> >> srcwarp unspecified
> >> >> surf = pial
> >> >> hemi = lh
> >> >> reshape = 0
> >> >> interp = nearest
> >> >> float2int = round
> >> >> GetProjMax = 0
> >> >> INFO: float2int code = 0
> >> >> INFO: changing type to float
> >> >> Done loading volume
> >> >> Computing registration from header.
> >> >> Using
> >> /data-01/trisanna/freesurfer/icbm-102/mri/orig.mgz as target
> >> >> reference.
> >> >> Reading surface
> >> /data-01/trisanna/freesurfer/icbm-102/surf/lh.pial
> >> >> Done reading source surface
> >> >> Mapping Source Volume onto Source Subject Surface
> >> >> 1 0 0 0
> >> >> using old
> >> >> Done mapping volume to surface
> >> >> Number of source voxels hit = 85413
> >> >> Writing to
> >> /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz
> >> >> Dim: 169941 1 1
> >> >>
> >> >>
> >> >> trisanna@kaplan:~$ mri_cor2label --i
> >> >>
> >> /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz
> >> --id 1 --l
> >> >>
> /data-01/trisanna/freesurfer/icbm-102/label/labeltest
> >> --surf lh.pial
> >> >> $Id: mri_cor2label.c,v 1.12 2011/03/02 00:04:14
> nicks
> >> Exp $
> >> >> Loading mri
> >> /data-01/trisanna/freesurfer/icbm-102/surfaceoverlay.mgz
> >> >> ------- Vox2RAS of input volume -----------
> >> >> -1.000 0.000 0.000 84970.500;
> >> >> 0.000 0.000 1.000 -0.500;
> >> >> 0.000 -1.000 0.000 0.500;
> >> >> 0.000 0.000 0.000 1.000;
> >> >> Scanning the volume
> >> >> Found 1651 label voxels
> >> >> Writing label file
> >> /data-01/trisanna/freesurfer/icbm-102/label/labeltest
> >> >> Centroid: -56170.34 -0.50 0.50
> >> >> mri_cor2label completed SUCCESSFULLY
> >> >>
> >> >>
> >> >> trisanna@kaplan:~$ freeview -f
> >> >>
> >> /data-01/trisanna/freesurfer/icbm-102/surf/lh.pial:label=labeltest
> >> >> No such file or directory
> >> >> freeview.bin: could not open label file
> labeltest.label
> >> >> No such file or directory
> >> >> LabelRead failedNo such file or directory
> >> >> en label file labeltest.label
> >> >>
> >> >>
> >> >>
> >> >> --
> >> >> Ph.D. CandidateMcGill University
> >> >> Integrated Program in Neuroscience
> >> >> Psychology
> >> >>
> >> >>
> >> >> On Tue, Apr 19, 2016 at 4:15 PM, Trisanna
> Sprung-Much
> >> >> <trisanna.sprung-much@mail.mcgill.ca
> <mailto:trisanna.sprung-much@mail.mcgill.ca>

> >> <mailto:trisanna.sprung-much@mail.mcgill.ca
> <mailto:trisanna.sprung-much@mail.mcgill.ca>>> wrote:
> >> >> many thanks - will give this a go!
> >> >>
> >> >> --
> >> >> Ph.D. CandidateMcGill University
> >> >> Integrated Program in Neuroscience
> >> >> Psychology
> >> >>
> >> >>
> >> >> On Tue, Apr 19, 2016 at 3:48 PM, Douglas N Greve
> >> >> <greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>> wrote:

> >> >> yes, but the surface overlay is in mgz (or
> >> nii.gz) format
> >> >>
> >> >> On 04/19/2016 03:05 PM, Trisanna
> Sprung-Much wrote:
> >> >> > Hi Doug
> >> >> >
> >> >> > below is the email I had written last
> Friday.
> >> I thought
> >> >> it got lost in
> >> >> > the mix. I was told by Bruce to use
> >> identity.nofile as
> >> >> the
> >> >> > transformation since my labels and T1s are
> >> already in
> >> >> the same space
> >> >> > and I just want to resample my labels to the
> >> surfaces.
> >> >> >
> >> >> > *I will try, as you suggest, --regheader *
> >> >> >
> >> >> > When I do "mri_cor2label --help" it says it
> >> uses surface
> >> >> overlays or
> >> >> > volumes. *I am not sure why I want to
> generate
> >> a volume
> >> >> with
> >> >> > mri_vol2surf* - shouldn't I generate a
> surface
> >> overlay
> >> >> that I can then
> >> >> > create as a label using mri_cor2label?
> >> >> >
> >> >> > many thanks
> >> >> >
> >> >> > Trisanna
> >> >> >
> >> >> >
> >> >> >
> >> >> > thanks Bruce
> >> >> >
> >> >> > I could not find identity.nofile anywhere,
> >> when I ran
> >> >> mri_vol2surf I
> >> >> > got the following error
> >> >> >
> >> >> > trisanna@kaplan:~$ mri_vol2surf --mov
> >> >> >
> >> /data-01/trisanna/freesurfer/icbm-112/mri/labels5.mgz
> >> >> --o
> >> >> > /data-01/trisanna/freesurfer/icbm-112 --reg
> >> >> identity.nofile --hemi lh
> >> >> > srcvol =
> >> >>
> /data-01/trisanna/freesurfer/icbm-112/mri/labels5.mgz
> >> >> > srcreg = identity.nofile
> >> >> > srcregold = 0
> >> >> > srcwarp unspecified
> >> >> > surf = white
> >> >> > hemi = lh
> >> >> > reshape = 0
> >> >> > interp = nearest
> >> >> > float2int = round
> >> >> > GetProjMax = 0
> >> >> > INFO: float2int code = 0
> >> >> > INFO: changing type to float
> >> >> > Done loading volume
> >> >> > regio_read_register(): No such file or
> directory
> >> >> > Could not open identity.nofile
> >> >> >
> >> >> >
> >> >> >
> >> >> > On Fri, Apr 15, 2016 at 8:40 AM, Bruce
> Fischl
> >> >> > <fischl@nmr.mgh.harvard.edu
> <mailto:fischl@nmr.mgh.harvard.edu>
> >> <mailto:fischl@nmr.mgh.harvard.edu
> <mailto:fischl@nmr.mgh.harvard.edu>>
> >> >> <mailto:fischl@nmr.mgh.harvard.edu
> <mailto:fischl@nmr.mgh.harvard.edu>
> >> <mailto:fischl@nmr.mgh.harvard.edu
> <mailto:fischl@nmr.mgh.harvard.edu>>>> wrote:
> >> >> > Hi Trisanna
> >> >> >
> >> >> > you can give the transformation "file" named
> >> >> identity.nofile and it
> >> >> > will assume that the transform is the
> >> identity. You can
> >> >> then use
> >> >> > mri_vol2label to sample the label onto the
> >> surface and
> >> >> visualize it with:
> >> >> >
> >> >> > freeview -f
> lh.inflated:label=lh.labels.label
> >> >> >
> >> >> > or some such
> >> >> >
> >> >> > cheers
> >> >> > Bruce
> >> >> >
> >> >> > On Thu, 14 Apr 2016, Trisanna
> Sprung-Much wrote:
> >> >> >
> >> >> > Hi there
> >> >> >
> >> >> > Just to reiterate my point above, when I
> open
> >> a surface
> >> >> created in
> >> >> > Freesurfer with my labels.mgz (converted
> from
> >> minc) in
> >> >> Freeview (i.e. no
> >> >> > transformations have been performed) I
> get the
> >> following
> >> >> snapshot
> >> >> > #1. Clearly, my original labels are aligned
> >> with the
> >> >> surface, as they
> >> >> > should
> >> >> > be since Freesurfer did not alter the space.
> >> So, how can
> >> >> I use mrivol2surf
> >> >> > to resample the surface such that the
> vertices
> >> carry the
> >> >> label info? What
> >> >> > output format should I use in
> mrivol2surf? How
> >> can I
> >> >> open this output in
> >> >> > Freeview?
> >> >> >
> >> >> > For instance, when I try a .dat that
> creates no
> >> >> transformation and
> >> >> > save the
> >> >> > output as .mgz and use Overlay in
> Freeview, I get
> >> >> snapshot #2. So,
> >> >> > something
> >> >> > is going wrong in my mrivol2surf command.
> >> >> >
> >> >> > My apologies for the questions
> >> >> > Trisanna
> >> >> >
> >> >> >
> >> >> >
> >> >> > --
> >> >> > Ph.D. Candidate
> >> >> > McGill University
> >> >> > Integrated Program in Neuroscience
> >> >> > Psychology
> >> >> >
> >> >> >
> >> >> > On Tue, Apr 19, 2016 at 1:23 PM, Douglas
> N Greve
> >> >> > <greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>>>
> >> >> wrote:
> >> >> >
> >> >> > I'm not sure what identity.nofile is or
> what you are
> >> >> trying to do (no
> >> >> > previous info in the email). If whatever
> you are
> >> trying to
> >> >> map to the
> >> >> > surface is already in anatomical space (so no
> >> registration
> >> >> necessary),
> >> >> > then you can use --regheader with
> mri_vol2surf.
> >> >> mri_cor2label will
> >> >> > take
> >> >> > a volume format as input (ie, mgz, nii.gz
> ,etc)
> >> >> >
> >> >> > On 04/19/2016 01:17 PM, Trisanna
> Sprung-Much wrote:
> >> >> > >
> >> >> > > Hi All!
> >> >> > >
> >> >> > > Could someone please tell me how to run
> >> mri_vol2surf
> >> >> using
> >> >> > > identity.nofile as the transformation? I
> >> cannot find any
> >> >> > documentation
> >> >> > > on identity.nofile
> >> >> > >
> >> >> > > Additionally, if my next step is to use the
> >> output of
> >> >> > mri_vol2surf in
> >> >> > > mri_cor2label, which takes surface
> overlays OR
> >> volumes,
> >> >> what format
> >> >> > > should my output be for mri_vol2surf?
> >> >> > >
> >> >> > > many thanks!
> >> >> > >
> >> >> > > Trisanna
> >> >> > >
> >> >> > > --
> >> >> > > Ph.D. Candidate
> >> >> > > McGill University
> >> >> > > Integrated Program in Neuroscience
> >> >> > > Psychology
> >> >> > >
> >> >> > >
> >> >> > >
> >> >> > >
> _______________________________________________
> >> >> > > Freesurfer mailing list
> >> >> > > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>
> >> >> > >
> >> >>
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >> >> >
> >> >> > --
> >> >> > Douglas N. Greve, Ph.D.
> >> >> > MGH-NMR Center
> >> >> > greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>
> >> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>

> >> <mailto:greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>>>

> >> >> > Phone Number: 617-724-2358
> <tel:617-724-2358> <tel:617-724-2358 <tel:617-724-2358>>
> >> <tel:617-724-2358 <tel:617-724-2358>
> <tel:617-724-2358 <tel:617-724-2358>>>
> >> >> > Fax: 617-726-7422 <tel:617-726-7422>
> <tel:617-726-7422 <tel:617-726-7422>>
> >> <tel:617-726-7422 <tel:617-726-7422>
> <tel:617-726-7422 <tel:617-726-7422>>>
> >> >> >
> >> >> > Bugs:
> >> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> >> >
> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> >> > FileDrop:
> https://gate.nmr.mgh.harvard.edu/filedrop2
> >> >> >
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >>
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >> >> >
> >> >>
> >>
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >> >> > Outgoing:
> >> >> >
> >> >>
> >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
> >> >> >
> >> >> > _______________________________________________
> >> >> > Freesurfer mailing list
> >> >> > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>

> >> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu

> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>
> >> >> >
> >> >>
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >> >> >
> >> >> >
> >> >> > The information in this e-mail is intended
> only
> >> for the
> >> >> person to
> >> >> > whom it is
> >> >> > addressed. If you believe this e-mail was sent
> >> to you in
> >> >> error and
> >> >> > the e-mail
> >> >> > contains patient information, please
> contact the
> >> Partners
> >> >> > Compliance HelpLine at
> >> >> > http://www.partners.org/complianceline . If the
> >> e-mail was
> >> >> sent to
> >> >> > you in error
> >> >> > but does not contain patient information,
> please
> >> contact
> >> >> the
> >> >> > sender and properly
> >> >> > dispose of the e-mail.
> >> >> >
> >> >> >
> >> >> >
> >> >> >
> >> >> > _______________________________________________
> >> >> > Freesurfer mailing list
> >> >> > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> >> >
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >> >>
> >> >> --
> >> >> Douglas N. Greve, Ph.D.
> >> >> MGH-NMR Center
> >> >> greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>
> >> <mailto:greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>
> >> >> Phone Number: 617-724-2358 <tel:617-724-2358>
> <tel:617-724-2358 <tel:617-724-2358>>
> >> >> Fax: 617-726-7422 <tel:617-726-7422>
> <tel:617-726-7422 <tel:617-726-7422>>
> >> >>
> >> >> Bugs:
> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
> >> >>
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >>
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >> >> Outgoing:
> >> >>
> >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
> >> >>
> >> >> _______________________________________________
> >> >> Freesurfer mailing list
> >> >> Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> >>
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >> >>
> >> >>
> >> >>
> >> >>
> >> >>
> >> >
> >> >

> >> > _______________________________________________
> >> > Freesurfer mailing list
> >> > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> >
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >>
> >> --
> >> Douglas N. Greve, Ph.D.
> >> MGH-NMR Center
> >> greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
> <mailto:greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>>
> >> Phone Number: 617-724-2358 <tel:617-724-2358>
> >> Fax: 617-726-7422 <tel:617-726-7422>
> >>
> >> Bugs:
> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
> >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >>
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> >> Outgoing:
> >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
> >>
> >> _______________________________________________
> >> Freesurfer mailing list
> >> Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >>
> >>
> >>
> >>
> >>
> >> _______________________________________________
> >> Freesurfer mailing list
> >> Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >

> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> <mailto:Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >
> > The information in this e-mail is intended only for the
> person to
> > whom it is
> > addressed. If you believe this e-mail was sent to you in
> error and
> > the e-mail
> > contains patient information, please contact the Partners
> > Compliance HelpLine at
> > http://www.partners.org/complianceline . If the e-mail was sent to
> > you in error
> > but does not contain patient information, please contact the
> > sender and properly
> > dispose of the e-mail.
> >
> >
> >
> >
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
> Phone Number: 617-724-2358

> Fax: 617-726-7422
>
> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
> Outgoing:
> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu

> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer