welcome to freesurfer!
To convert from dicom to mgz, you can do a couple of things:
use mri_convert, eg,
mri_convert /path/to/dicomfile mprage.mgz
Then run recon-all like
recon-all -i mprage.mgz -s subjectname -all
You can also use dcmunpack to unpack all volumes from a dicom directory
See https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Practice for more info
Also check out our tutorials

On 1/8/2025 4:18 PM, allio34218@aol.com wrote:

External Email - Use Caution

Hi, I was wondering if anyone can point me to a good tutorial that would focus on how to upload and process DICOM data into FS / FreeView.

I have a recent Triage Brain Atrophy report from NeuroQuant and would like to see how this compares to results generated in FS.

I am a brand-new user and just installed FS on my computer.

Thank you,

Allison O.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer