You will need to segment your differences into bins, then you can use mris_seg2annot. Run it with --help for more info.

doug


Elif SIKOGLU wrote:
Hello,

We have created a difference map (surface encoded volume). We would like to display different values on the map as different colors (similar to an annotation file). Is there a way to convert a surface encoded volume to an annotation format or even label files? 

Thanks,
Elif

_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358 
Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting