> CC: mj_coming@hotmail.com; jennifer_g_goldman@rush.edu; vydinh@rush.edu; freesurfer@nmr.mgh.harvard.edu
> From: fischl@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] manual editting problem
> Date: Thu, 15 Sep 2011 20:07:41 -0400
> To: sita@nmr.mgh.harvard.edu
>
> Can you send an image?
>
>
>
> On Sep 15, 2011, at 6:38 PM, Sita Kakunoori <sita@nmr.mgh.harvard.edu> wrote:
>
> >
> > How does the wm.mgz look. Correcting the white surface will correct the
> > pial surface as well.
> >
> > Sita.
> >
> >
> > On Thu, 15 Sep 2011, Jing Ming wrote:
> >
> >>
> >> Hi Surfers:
> >> We have been coming
> >> across several gray matter regions that are not included within the pial
> >> surface (red line) when it should be (e.g., very anterior parts of the
> >> temporal lobe). From my understanding of similar posts on the forum, it
> >> seems that there isn't a way to add this region to the pial surface so
> >> that the missing brain matter is included. We have tried using the clone
> >> tool to fill in this region, as per the tutorial and have experimented
> >> with this tool using the tutorial data. I followed the steps in the
> >> tutorial but could not observe any changes when the middle button was
> >> selected. Does anyone have any ideas on how to troubleshoot this
> >> issue? Can someone please explain to me why this is not possible? Also
> >> how does Freesurfer determine what regions to include within the pial
> >> surface? If there is a way that has been developed recently, please
> >> enlighten me.
> >>
> >> -Jing
> > _______________________________________________
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> >
> >
>
>
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