We don't usually use mri_glmfit for this kind of thing. If you want to
do it this way, then you cannot use an FSGD file. Instead, create a
design matrix with the seed time course then pass that to mri_glmfit
with the --X option (and no --fsgd option).

On 05/04/2016 10:17 AM, Eun Young Choi wrote:
>
> Hi all,
>
> I'd like to run a resting-state fcMRI analysis within the GLM
> (mri_glmfit), but I'm not completely sure how to set this up in the
> FSGD file. I've seen the online tutorial of age vs cortical thickness,
> but I'm not sure how to specify a regressor with a timeseries. Does
> anyone have an example of an FSGD file for this?
>
> Thanks!
> Eun Young
>
>
>

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