Dear Freesurfers,
I would like to use V1 labels (created with the Hinds method) for a ROI-based analysis on data analyzed with FSL FEAT using FSL featquery.
I have not run a full recon-all segmentation, only recon-all -s subjid -label-v1
I need to convert the labels to nifti volumes while registering to MNI standard space.
I guess the right command would be something like
mri_label2vol --label lh.v1.predict.label --reg register.dat --hemi lh --subject subject --o lh.v1.predict.label
Is there a register.dat from the FSL feat directory that I could use for this?
Anything else I need to add?
Of course, I would like to keep the resulting volume probabilistic.
All the best,
Anders