Hello, Martin,
I checked the norm.mgz of these two time points, nothing is wrong.
Maybe I can try the new version of mri_robust_register and ...template,
I checked the mailing list. Actually, someone met the same kind of problem in 2009 and 2008.
But it looks like this problem was unsolved.
Thanks!
Guang
From: mreuter@nmr.mgh.harvard.edu
Date: Thu, 28 Oct 2010 21:29:55 -0400
To: freesurfer_zg@hotmail.com
CC: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] longitudinal base error
Haven't seen this before. Can you send the lta file (should be in basid/MRI/transforms)
Probably the lta is not correct.
Also you can try to delete the base dir and rerun, maybe it was just a hiccup.
Does the norm.mgz look good in the base? If not registration did not work.
In that case download updated mri_robust_register and ...template (links on the wiki on the 5.0 release notes) and run again.
Hi, there,
%% After running this command with FS v4.5 :
recon-all -base 005_S_0221BASE -tp 005_S_0221_45_20070321.105506_1 -tp 005_S_0221v2_45_20061006.104318_1 -all -force
%% I get the following error:
mri_concatenate_lta -invert1 005_S_0221_45_20070321.105506_1_to_005_S_0221BASE.lta identity.nofile 005_S_0221BASE_to_005_S_0221_45_20070321.105506_1.lta
invert the first LTA before applying it
MatrixInverse: NULL input matrix!
Read individual LTAs
%%%%%%%%%%
Any one can help me?
Thanks a lot!
uang
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