Dear Freesurfers,<br>I know this is a very simple question.  I&#39;m just having trouble specifying the correct directories for rtview based on the example. When I run rtview, it can&#39;t find the image files that really do exist in the directory.<br>
<br>For the following example in the help section: I did what I thought were the proper replacements<br><br>Example: <br>cd sess/bold/rtopy.lh<br> rtview --s subject --lh --eccen \<br>
   --real eccen/real.nii --imag eccen/imag.nii --fsig eccen/fsig.nii<br><br>What I did:<br>cd $SUBJECTS_DIR/retinotopy/sj07/bold/rtopy.self.lh<br>rtview --s sj07 --lh --eccen  \<br>   --real eccen/real.nii --imag eccen/imag.nii --fsig eccen/fsig.nii<br>
<br>Then I tried getting rid of the --s and --lh flags because I was already in that directory, but that didn&#39;t help either.<br><br>If I&#39;m already in the in the correct folder why do I still have to specify --s and --lh?<br>
<br>Thanks.<br>Michelle<br>