Dear Experts

I just recently started using Freesurfer (implemented as a virtual machine on a Windows machine). After having completed the recon-all procedure, I now want to export the subcortical segementation as .nii images for further use in SPM. My aim is to have a ROI for each segmented subcortical structure. What would be the easiest way to do this? Any help is appreciated.

Thanks a lot!

Best regards,

Joe

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Dr. Dipl.-Psych. Joe Simon

Universitätsklinikum Heidelberg
Klinik für Allgemeine Innere Medizin und Psychosomatik

Im Neuenheimer Feld 410
69120

Tel.: ++49(0)6221-56-38667
joe.simon@med.uni-heidelberg.de
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