Thanks Doug.
After doing reg-feat2anat , I checked the registration and overlaid zstat file:
tksurfer subjectid rh inflated -overlay featdir/rendered_thresh_zstat1.nii.gz
I have attached an image of tksurfer interface . I'm not quite sure about what blue and red clusters mean. They are suposed to be activations, but I'm not watching the same in FSL-view. Could you give me a hand please? Am I using the right stat file?
Thanks in advance
best regards.
------------------------------------------------------------------------Hi all
Can anyone help me overlaying fMRI activations from fsl on a anatomical T1 volume in freesurfer.
Is there any previous format conversion to do before?
Thanks in advance
best regards,
--
Leo Kay.
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