Dear group,

How can I apply the talairach.m3z transformation on a list of points?

I was trying to use applyMorph on one of my subjects:

applyMorph --template $SUBJECTS_DIR/M1/mri/orig.mgz --transform $SUBJECTS_DIR/M1/mri/transforms/talairach.m3z point_list $SUBJECTS_DIR/M1/electrodes/electrodes_to_morph.txt tal.txt a

but I got this error:

Template name:/autofs/space/thibault_001/users/npeled/subjects//M1/mri/orig.mgz

After loading template

Template name:/autofs/space/thibault_001/users/npeled/subjects//M1/mri/orig.mgz

After loading template

extension = m3z

terminate called after throwing an instance of 'std::bad_alloc'

what(): std::bad_alloc

Abort (core dumped)

I'm using the FreeSurfer dev version (in martinos), and my SUBJECT_DIR is /autofs/space/thibault_001/users/npeled/subjects/

Thanks!

Noam