Hello Experts:
I am running the first pre-processing
step in Tracula and come across the error:
set: Variable name must begin with a
letter.
Below is an excerpt of the script which
seems to be running fine. Did I make a mistake in my
dmrirc_single_subject file?
Cheers,
Catherine
fmris-mac-pro-2:8000_tracula fmri$
trac-all -prep -c $SUBJECTS_DIR/dmrirc_single_subject
set: Variable name must begin with a
letter.
INFO: SUBJECTS_DIR is /8000_tracula/
INFO: Diffusion root is
/8000_tracula//8000_tracula_out/
Actual FREESURFER_HOME
/Applications/freesurfer
trac-preproc -c
/8000_tracula//8000_tracula_out//8001_DTI/scripts/dmrirc.local -log
/8000_tracula//8000_tracula_out//8001_DTI/scripts/trac-all.log -cmd
/8000_tracula//8000_tracula_out//8001_DTI/scripts/trac-all.cmd
#-------------------------------------
/Applications/freesurfer//bin/trac-preproc
#-------------------------------------
#@# Image corrections Mon Jan 14
09:37:29 MST 2013
mri_convert
/8000_tracula//8001_DTI/IM-0006-0001.dcm
/8000_tracula//8000_tracula_out//8001_DTI/dmri/dwi_orig.nii.gz
mri_convert
/8000_tracula//8001_DTI/IM-0006-0001.dcm
/8000_tracula//8000_tracula_out//8001_DTI/dmri/dwi_orig.nii.gz
$Id: mri_convert.c,v 1.179.2.2
2011/05/16 20:53:47 greve Exp $
reading from
/8000_tracula//8001_DTI/IM-0006-0001.dcm...
Starting DICOMRead2()
dcmfile =
/8000_tracula//8001_DTI/IM-0006-0001.dcm
dcmdir = /8000_tracula//8001_DTI
Ref Series No = 6
the script continues to run ok.