From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 2:27 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] LGI in QDEC menu please respond soon

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I guess the .Qdecrc file have already in your qdec folder. Try “ctrl + H” to see the hiden file and write MEASURE1 = pial_lgi into .Qdecrc file.

 

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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 1:34 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] LGI in QDEC menu please respond soon

 

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Yes I did

 

On Tue, Apr 23, 2019 at 12:59 PM Pan Yunzhi <wopanyunzhi@gmail.com> wrote:

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Did you run this command “recon-all -s my_subject_id -qcache -measure pial_lgi” before？ If not， you should run this.

 

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From: Avi Gharehgazlou
Sent: Tuesday, April 23, 2019 12:06 PM
To: Freesurfer support list
Subject: [Freesurfer] LGI in QDEC menu please respond soon

 

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Hi experts, 

To give more detail re my previous post....  I have created the .Qdecrc file in my Subjects directory and QDEC folder, which contains one line : MEASURE1 = pial_lgi . However, LGI is still not appearing in the drop down menu on QDEC. 

 

When I do command more ~/.Qdecrc it gives the following output:

 

 

# This file is automatically generated by the application

# If you change any lines or add new lines, note that all

# coments and empty lines will be deleted. Every line has

# to be in format: 

# key = value

#

Qdec1\Dialogs\ExitApplication = 0

Qdec1\Dialogs\SendErrorLog = 0

Qdec1\Geometry\MainPanelSize = 375

Qdec1\Geometry\MainPanelVisibility = 1

Qdec1\Geometry\SaveUserInterfaceGeometry = 1

Qdec1\Geometry\SecondaryPanelSize = 250

Qdec1\Geometry\SecondaryPanelVisibility = 0

Qdec1\Geometry\ViewPanelPosition = Right

Qdec1\Geometry\WindowGeometry = 900x700+531+190

Qdec1\RunTime\MostRecentVersionLaunched = 1.5

Qdec1\RunTime\PrintTargetDPI = 100.000000

Qdec1\RunTime\ShowBalloonHelp = 1

Qdec1\RunTime\ShowSplashScreen = 1

Qdec1\RunTime\ToolbarFlatButtons = 1

Qdec1\RunTime\ToolbarFlatFrame = 1

 

Based on previous archives I think my .Qdecrc was not saved properly because the line in this file (MEASURE1 = pial_lgi) doesn't appear in the above output. I know I have to put this line in the above output, but I can't seem to figure out how. Will you please be able to tell me how I can do this?

Thanks so much  

 

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