hmmm, it appears in my version of 7.4.1. Are you sure it is not there? If not, then you can just copy it from 7.2 to 7.4.1

On 8/1/2025 10:58 AM, Juen Guo wrote:

        External Email - Use Caution        

Dear FreeSurfer Expert,

I am trying to segment the subunits of the hypothalamus using FreeSurfer 7.4.1, but the segment_subregions command does not include an option for the hypothalamus in this version. I found that version 7.2.0 includes the command mri_segment_hypothalamic_subunits, but this command is not executable in version 7.4.1.

My questions are:

  1. Do I have to downgrade to 7.2.0 to use this function?
  2. Why was this function discontinued in version 7.4? Was it removed due to defects or other issues?
  3. Is there any alternative way to segment the hypothalamus in FreeSurfer 7.4.1?
Best,
Juen

_______________________________________________
Freesurfer mailing list -- freesurfer@nmr.mgh.harvard.edu
To unsubscribe send an email to freesurfer-leave@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman3/lists/freesurfer@nmr.mgh.harvard.edu/