Dear Anderson, <div>I have seen this message and I'm currently trying to use your script &quot;srf2obj&quot; to convert to obj format some surfaces created by FS, firstly i did convert the aseg into a volume in the native space using &quot;mri_convert&quot;, after that, i'd transform the aseg volume into a surface mgh format (mri_vol2surf), then store the surface as ascii by using &quot;mri_convert&quot; then I'm using your script to convert that surface to an object file but always renturns the following error:<div><br /></div><div>aplication srf2obj</div><div><br /></div><div>gawk: /root/trabajo/freesurfer/bin/srf2obj:2:</div><div>' inválido en la expresiónrfer/bin/srf2obj:2: ^ caracter '</div><div><br /></div><div>I'm working under centOS 4.3 </div><div><br /></div><div>Best Regards,</div><div>Gabriel</div><div><br /></div><div><br /></div><div style="font-family: 'Times New Roman'; font-size: 16px; "><div><br /></div><div><br /></div><div>El 22/02/12, <b class="name">Anderson Winkler </b> &lt;andersonwinkler@hotmail.com&gt; escribió:</div><blockquote cite="mid:BLU0-SMTP16028EA879D711C1A2E1F9EA1640@phx.gbl" class="iwcQuote" style="border-left: 1px solid #00F; padding-left: 13px; margin-left: 0;" type="cite"><div class="mimepart text html">
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    Hi Darshan,<br />
    <br />
    If you'd like to go directly from FreeSurfer .asc to OBJ, the
    attached little script should do the trick...<br />
    <br />
    Hope it helps!<br />
    <br />
    All the best,<br />
    <br />
    Anderson<br />
    <br />
    <br />
    <br />
    On 21/02/12 16:59, Pedro Paulo de Magalhães Oliveira Junior wrote:
    </p><blockquote cite="mid:CAPSXCjqWGBZrVMvbN6cCJY5vkoykxbF+sQc62bNFGRuGHSwqCg@mail.gmail.com" type="cite">There's a how-to in the FreeSurfer website: <a href="http://surfer.nmr.mgh.harvard.edu/fswiki/HowTo/HowTo" moz-do-not-send="true" target="_blank">http://surfer.nmr.mgh.harvard.edu/fswiki/HowTo/HowTo</a>
      <div><br />
      </div>
      <div>Pedro Paulo Jr.<br />
        <br />
        <div class="gmail_quote">
          On Mon, Feb 20, 2012 at 23:32, Manfred G Kitzbichler <span dir="ltr">&lt;manfredg@nmr.mgh.harvard.edu &lt;manfredg@nmr.mgh.harvard.edu&gt;&gt;</span>
          wrote:<br />
          <blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt
            0.8ex; border-left: 1px solid rgb(204, 204, 204);
            padding-left: 1ex;">
            <div bgcolor="#FFFFFF" text="#000000"> Hi Darshan,<br />
              <br />
              as Bruce suggested, you can use mris_convert to get an STL
              file which you can import into Blender or MeshLab. Both
              write Wavefront OBJ files.<br />
              <br />
                  - Manfred
              <div>
                <div class="h5"><br />
                  <br />
                  <br />
                  On 02/20/2012 07:24 PM, Darshan P wrote: </div>
              </div>
              <blockquote type="cite">
                <div>
                  <div class="h5">
                    <div>
                      <div>Hello all,</div>
                      <div><br />
                      </div>
                      <div>I was wondering if I can convert the surface
                        outputs to an OBJ mesh file format . </div>
                      <div>Since most of the applications are in windows
                        I was hoping if there is conversion tool to do
                        this .</div>
                      <div><br />
                      </div>
                      <div>Regards</div>
                      <div>Darshan</div>
                    </div>
                    <br />
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                    <br />
                  </div>
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                  <br />
                  <div>-- <br />
                    <a href="https://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=1377" moz-do-not-send="true" target="_blank">Manfred G. Kitzbichler</a>,
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                    149 Thirteenth Street, Rm 10.018<br />
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
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</pre>
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</span>
</div></blockquote></div><div><br />-- <br /></div><div><font size="3">--------------------------<br />PhD. student Gabriel González-Escamilla<br />Laboratory of Functional Neuroscience<br />Department of Physiology, Anatomy, and Cell Biology<br />University Pablo de Olavide<br />Ctra. de Utrera, Km.1<br />41013 - Seville<br />- Spain -<br /><br />Email: ggonesc@upo.es<br />http://www.upo.es/neuroaging/es/</font></div></div>