sorry, no idea. They probably merged labels from the aparc or the aparc+a2009s to create those labels. You might also try mri_annotatoin2label with the --lobes option

On 8/4/2021 5:28 AM, Sumit Sharma wrote:

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Hi Freesurfer Developers 

I am trying to reproduce your work in the below paper using freesurfer:

Johansen-Berg, Heidi, et al. "Functional–anatomical validation and individual variation of diffusion tractography-based segmentation of the human thalamus." Cerebral cortex 15.1 (2005): 31-39.


However, I am not able to find which find represents the c nding labels 9000 - 9006 as mentioned in the lookup table list:
MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI/FreeSurferColorLUT

Please share the details of the necessary files (mgz etc) after running the recon-all command.

Thank you.
Regads
Sumit Sharma


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