It looks like there is a problem with your input dicom file - image orientation tag is missing.

 

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of MANSON ERIC NAAB
Sent: Thursday, January 5, 2023 11:15 PM
To: Freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] recon-all terminates with error

 

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Dear FreeSurfer experts, 

I am a first time  FreeSurfer user trying to run a recon-all for a sT1_W image. However, recon-all terminates with an error "tag image orientation not found" I need help on how to resolve this.

 

Kindly find the recon-all.log file.

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