Hi Elizabeth - Have you tried running this with the latest version (7.2)? It looks from the log file like you used 6.0. The tutorial and other info on the wiki apply to the newest version only. Let us know if you are still having this issue.

Thanks,
Anastasia.
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Kaplan, Elizabeth <elizabeth_kaplan@brown.edu>
Sent: Saturday, October 23, 2021 8:04 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Tracula -- Segmentation Fault
 

        External Email - Use Caution        

I ran recon-all on a group of three subjects, followed by trac-all -prep 

This process exited with errors: Segmentation fault

Original DWI and T1 images appear normal, with no large distortions or missing voxels. 

My configuration file and trac-all.log are attached below. 

Any guidance is appreciated! 


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Elizabeth Kaplan '22
She / Her / Hers
Sc.B. Candidate Cognitive Neuroscience 
B.A. Candidate Contemplative Studies 
69 Brown St Mail #4391
Providence, RI 02912