Dear Freesurfer experts,

 

I tried to run the local GI command recon-all –s –localGI and got the following error message:

 

>> ??? Undefined function or method 'make_outer_surface' for input arguments of

type 'char'.

 

From earlier post I tried to fix the problem by changing the matlabpath like this:

 

setenv MATLABPATH /directory/bin

> setenv PATH ${MATLABPATH}/bin:${PATH}

 

However, if I then check the path via „getmatlab“ I still get the old path. Did I do something wrong?

And is it right to set up my matlabpath to the matlab/bin folder?

 

The scripts like make_outer_surface.m are located in the freesurfer/matlab directory. Or does the path have to point to the scripts directly?

 

Thank you very much in advance

 

Kind regards,

Christiane

 

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Forschungszentrum Juelich GmbH
52425 Juelich
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Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498
Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher
Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
Prof. Dr. Sebastian M. Schmidt
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