Thanks for the interest in our work, Anton!
We don’t have a template in MNI space, sorry (it’s on the to-do list, but buried among many other items). But you can always segment the template with the atlas
😃
Cheers,
/Eugenio
http://www.jeiglesias.com
From:
freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Dr. Anton Jakovcic <jakovcic@cbs.mpg.de>
Date: Wednesday, September 6, 2023 at 10:10 AM
To: freesurfer <freesurfer@nmr.mgh.harvard.edu>
Cc: Seyma Bayrak <bayrak@cbs.mpg.de>
Subject: [Freesurfer] FreeSurfer hippo-amygala module
External Email - Use Caution
Dear all,
here is Anton - a PhD candidate from Max Planck Institute for Human Cognitive and Brain Research in Leipzig, Germany.
Using FreeSurfer module segment_subregions, I successfully segmented amygdala for individual HCP subjects. Thanks a lot for developing it!
Currently, I am trying to get a group-level or a MNI-level segmentation to build a representative figure.
Do you think, is it possible to segment amygdala in MNI-registration template?
Any help/suggestion is appreciated.
Kind regards
Anton Jakovcic
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