Dear Freesurfer experts,

I want to analyze DTI data using the command 

 

Under Fressurfer 5.3, the analysis fail showing this error message:

nifti1Read(): unsupported slice timing pattern 5 in /data/anaconda/mesgp/dtrecon3/subj1/dwi.nii

I re-run the same previous comand line under freesurfer 6 and the nalysis went fine.

 

The problem is that all my recons are prepared under freesurfer 5.3. If I use dt_recon under FS6 does this affect the results?

 

Thank you for any advice you provide!