I am trying to reproduce your work in the below paper using freesurfer:
Johansen-Berg, Heidi, et al. "Functional–anatomical validation and individual variation of diffusion tractography-based segmentation of the human thalamus." Cerebral cortex 15.1 (2005): 31-39.
Please share the details of the necessary files (mgz etc) after running the recon-all command.
Thank you.
Regads
Sumit Sharma