Hello,

Below I've copied the information for 1 case that has repeatedly given me the same error; however, I'm receiving the same error for the entire caselist (which has over 30 cases). Any help would be very much appreciated!

Thanks,
Tali

[bugr output]

FREESURFER_HOME: /projects/schiz/software/
freesurfer4.2.0_64/

Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v4.2.0

RedHat release: Fedora release 11 (Leonidas)

Kernel info: Linux 2.6.30.10-105.2.23.fc11.x86_64 x86_64

[error log]
#@# Talairach Failure Detection Wed Dec 22 12:48:09 EST 2010
/home/pnlstaff/freesurfer/subjects/casen1623/mri

 talairach_afd -T 0.005 -xfm transforms/talairach.xfm

ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050)
Linux compute-3-9.local 2.6.9-34.ELsmp #1 SMP Fri Feb 24 16:56:28 EST 2006 x86_64 x86_64 x86_64 GNU/Linux

recon-all exited with ERRORS at Wed Dec 22 12:48:09 EST 2010

[program]

recon-all -i nifti-files/n1623-t1w-realign-masked.nii.gz -autorecon1 -noskullstrip -subjid casen1623 && cp subjects/casen1623/mri/T1.mgz subjects/casen1623/mri/brainmask.mgz && recon-all -autorecon2 -subjid casen1623 && recon-all -autorecon3 -subjid casen1623


--
Talis M. Swisher, BA
Research Assistant
Psychiatry Neuroimaging Laboratory
Harvard Medical School, Brigham and Women's Hospital
1249 Boylston St, 3rd Floor
Boston, MA 02215
Office: (617) 525-6119
Cell: (336) 577-5071
Fax: (617) 525-6150