Hello all,

 

I am in the middle of a FreeSurfer v.6.0 longitudinal analysis, running on the Martinos cluster, and I received an error today during the                (–base) template creation step regarding a file that the pipeline calls upon:

 

GCAread(/usr/local/freesurfer/stable6/average/RB_all_2016-02-11.gca): could not open file

 

I noticed that permissions access to this file are limited at present to the greve group and that the file was last modified earlier today. I’m unfamiliar with this component’s functionality, but am assuming access to it is necessary for template creation. Would this simply be the issue?

 

Preemptive thanks,

Brendan Grafe

 

 

-----------------------------

Brendan P. Grafe MSc

Clinical Research Assistant

Berenson-Allen Center for Noninvasive Brain Stimulation

Beth Israel Deaconess Medical Center

330 Brookline Avenue

Boston, MA 02215

Tel: 617-667-0256

Fax: 617-975-5322

 



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