Cmdline:
        recon-all -autorecon1 -noskullstrip -noT2pial -noFLAIRpial -openmp 8 -subjid sub-01 -sd /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer -nomotioncor -notalairach -nonuintensitycor
Stdout:
        fs-check-version --s sub-01 --o /tmp/tmp.umDYT6
        Tue Apr 16 17:23:35 IDT 2024

        setenv SUBJECTS_DIR /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer
        cd /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_work/fmriprep_23_2_wf/sub_01_wf/anat_fit_wf/surface_recon_wf/autorecon1
        /opt/freesurfer/bin/fs-check-version --s sub-01 --o /tmp/tmp.umDYT6
        -rwxrwxr-x 1 root root 18565 Aug  4  2022 /opt/freesurfer/bin/fs-check-version

        freesurfer-linux-ubuntu22_x86_64-7.3.2-20220804-6354275
        $Id$
        Linux benyakov-a.elsc.huji.ac.il 5.4.0-159-generic #176-Ubuntu SMP Mon Aug 14 12:04:20 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
        pid 1035658
        Current FS Version freesurfer-linux-ubuntu22_x86_64-7.3.2-20220804-6354275
        bstampfile exists /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01/scripts/build-stamp.txt
		        Subject FS Version: freesurfer-linux-ubuntu22_x86_64-7.3.2-20220804-6354275
        No constraints on version because REQ=UnSet and FsVerFile=NotThere
        #@#% fs-check-version match = 1
        fs-check-version Done
        INFO: SUBJECTS_DIR is /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer
        Actual FREESURFER_HOME /opt/freesurfer
        -rw-rw-r-- 1 shahar.bennoun benyakov-lab 238446 Apr 16 17:05 /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01/scripts/recon-all.log
        Linux benyakov-a.elsc.huji.ac.il 5.4.0-159-generic #176-Ubuntu SMP Mon Aug 14 12:04:20 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
        /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01/mri/transforms /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01 
        /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01 
        #--------------------------------------------
        #@# Intensity Normalization Tue Apr 16 17:23:38 IDT 2024
        /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01/mri
		
         mri_normalize -g 1 -seed 1234 -mprage nu.mgz T1.mgz 

        using max gradient = 1.000
        setting seed for random number genererator to 1234
        assuming input volume is MGH (Van der Kouwe) MP-RAGE
        reading mri_src from nu.mgz...
        normalizing image...
        NOT doing gentle normalization with control points/label
        talairach transform
         0.95387  -0.26417   0.37739   63.11058;
         0.47452   1.26412  -0.24242  -119.31696;
        -0.07407   0.04213   1.27537   132.14726;
         0.00000   0.00000   0.00000   1.00000;
        processing without aseg, no1d=0
        MRInormInit(): 
        INFO: Modifying talairach volume c_(r,a,s) based on average_305
        MRInormalize(): 
        MRIsplineNormalize(): npeaks = 8
        Starting OpenSpline(): npoints = 8
		        building Voronoi diagram...
        performing soap bubble smoothing, sigma = 8...

        Iterating 2 times
        ---------------------------------
        3d normalization pass 1 of 2
        error: No such file or directory
        error: MRInormFindControlPoints: could not find enough control points
        error: No such file or directory
        error: MRInormFindControlPoints failed
        Linux benyakov-a.elsc.huji.ac.il 5.4.0-159-generic #176-Ubuntu SMP Mon Aug 14 12:04:20 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux

        recon-all -s sub-01 exited with ERRORS at Tue Apr 16 17:23:43 IDT 2024

        For more details, see the log file /ems/elsc-labs/benyakov-a/Lab-Shared/fmriprep_output/sourcedata/freesurfer/sub-01/scripts/recon-all.log
        To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

Stderr:

Traceback:
        RuntimeError: subprocess exited with code 1.

240416-17:24:42,546 cli ERROR:
         Preprocessing did not finish successfully. Errors occurred while processing data from participants: 01 (1). Check the HTML reports for details.
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