Hi again,
just an update, I treid this all again with an older child (109 years) but same thing happens.
Logfile attached.
Yours
Frank
----------------
PD Dr. Frank Zoellner
Group Leader "MRI and Medical Image Analysis"
Computer Assisted Clinical Medicine
Medical Faculty Mannheim
Heidelberg University
Theodor-Kutzer-Ufer 1-3
D-68167 Mannheim
Phone: +49 (0)621 3835117
Fax: +49 (0)621 3835123
Von: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu]
Im Auftrag von Zoellner, Frank
Gesendet: Dienstag, 9. Februar 2016 10:35
An: freesurfer@nmr.mgh.harvard.edu
Betreff: [Freesurfer] Processing of young children using Freesurfer
Hi,
I am currently working on a project involving brain morphometry of 2 year old children.
We are interested in segmenting the ventricle and I tried to run freesurfer using the standard recon-all -all for a first test.
Unfortunately, freesurfer reports an error (see attached log file).
I also read about that it is advised to run freesurfer with patient age >5 but maybe someone has an idea how to solve this.
As far as I get from the step it crashes at the intensity correction step?
Do I need to calculate some sort of template maybe ?
Any comments welcome
Yours
Frank
----------------
PD Dr. Frank Zoellner
Group Leader "MRI and Medical Image Analysis"
Computer Assisted Clinical Medicine
Medical Faculty Mannheim
Heidelberg University
Theodor-Kutzer-Ufer 1-3
D-68167 Mannheim
Phone: +49 (0)621 3835117
Fax: +49 (0)621 3835123