Yes, i got several ones.
Am Montag, 25. August 2014 schrieb Douglas N Greve :
yes. Do you have significant clusters?
On 08/25/2014 10:41 AM, Katharina Zech wrote:
> Also in case of a full mc simulation? I know that ocn files exist for
> precomputed mc simulations in qdec.
> Yes, I got version 5.3.0 and significant clusters.
>
>
> 2014-08-25 16:07 GMT+02:00 Douglas Greve <greve@nmr.mgh.harvard.edu
> <mailto:greve@nmr.mgh.harvard.edu>>:
>
>
> There won't be a filed called exactly that,but one of a name
> similar to that. Is there such a file. If you did the MC
> simulation in 5.3 and you had one or more significant clusters,
> then there should be.
>
>
>
> On 8/25/14 7:43 AM, Katharina Zech wrote:
>> Dear Doug,
>>
>> I am using the current version of free surfer (5.3.0).
>> Unfortunately there isn't a file with the same/similar name. Do
>> you think it should exist in 5.3.0?
>>
>> Best
>>
>> Katharina
>>
>>
>> 2014-08-19 17:19 GMT+02:00 Douglas Greve
>> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>>:
>>
>>
>> Yes, you are just getting the raw data from the ocn.dat file.
>>
>>
>>
>> On 8/19/14 11:05 AM, yaya ya wrote:
>>> Sorry to interrupt.
>>>
>>> I have a relevant question about the correlation analysis.
>>> If the age has been controlled for when surface-based
>>> analysis is done, do we need to controll for age again when
>>> we do subsequent correlational analysis in SPSS?
>>>
>>>
>>> On Tue, Aug 19, 2014 at 5:01 PM, Douglas Greve
>>> <greve@nmr.mgh.harvard.edu
>>> <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>>>
>>>
>>> Depending on the version of FS that you are using, the
>>> data you want may already be part of the MC simulation
>>> output in a file called something like csdbase.y.ocn.dat
>>>
>>>
>>>
>>> On 8/17/14 2:39 PM, Katharina Zech wrote:
>>>> Hi Doug,
>>>>
>>>> I did a full monte-carlo simulation. And now I am
>>>> trying to do a ROI extraction of my significant
>>>> clusters on tksurfer (for the purpose of a further
>>>> correlation). And it is not working. Do you see the
>>>> error in the attachment? I cannot choose "Graph marked
>>>> vertices avg".
>>>> Do you see any other possibility to get the values of
>>>> my clusters for further analysis, i.e. correlation?
>>>>
>>>> Best,
>>>>
>>>> Katharina
>>>>
>>>>
>>>> 2014-08-15 18:24 GMT+02:00 Douglas N Greve
>>>> <greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>:
>>>>
>>>>
>>>> Hi Katharina, I don't understand from your
>>>> description what you are
>>>> trying to do. Can you clarify?
>>>> doug
>>>>
>>>>
>>>> On 08/14/2014 09:23 AM, Katharina Zech wrote:
>>>> > Dear all,
>>>> >
>>>> > I want to do a correlation of significant
>>>> clusters found after full
>>>> > monte-carlo simulation and symptom severity of
>>>> patients affected with
>>>> > obsessive-compulsive disorder (OCD).
>>>> > The aim is as follows:
>>>> > First, to see whether the severity of symptoms
>>>> correlate with the
>>>> > degree of structural brain alterations.
>>>> > Second, whether the degree of structural brain
>>>> alterations shows a
>>>> > correlation with specific subtypes of OCD.
>>>> >
>>>> > As I run the full monte-carlo simulation, the
>>>> significant clusters pop
>>>> > up in tksurfer.
>>>> > So could you explain to me the following steps?
>>>> >
>>>> > Thanks a lot!
>>>> >
>>>> > Katharina
>>>> >
>>>> >
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>>>> --
>>>> Douglas N. Greve, Ph.D.
>>>> MGH-NMR Center
>>>> greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> Phone Number: 617-724-2358 <tel:617-724-2358>
>>>> Fax: 617-726-7422 <tel:617-726-7422>
>>>>
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
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