Hello Freesurfer experts,

I'm trying to run the TRACULA preprocessing pipeline using data in NIFTI-1 format, but am receiving the following error:

"nifti1Read(): unsupported slice timing pattern 5"

Several other users have run into this problem. In the archives, there are a few links to dead file transfer protocols for a patch for mri_convert that might solve my problem.  May I please have a patch for mri_convert?

I'm using freesurfer-Darwin-lion-stable-pub-v5.3.0 and OSX Yosemite.

Thank you,

Jennifer


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Jennifer Barredo, PhD
Staff Scientist
Providence VA Medical Center
Research Affiliate
Brown Institute for Brain Sciences