Hi,

I’m trying to use orient_mri to orient a volume that is displaying as an axial rather than a coronal volume. According to the instructions, I need to see 4 views and be able to rotate the loaded volume – but I only see one window.. do you know why this is ? there wasn’t a error message as such , but the volume isn’t being displayed as it should I think ..

The command I use is :

orient_mri –volume orig.mgz

I’m using a linux ubuntu with freesurfer version 4.3

thanks,

Prapti